BLASTX nr result
ID: Coptis23_contig00015400
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00015400
(627 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300994.1| predicted protein [Populus trichocarpa] gi|2... 109 3e-40
gb|ACD56618.1| peptidoglycan-binding LysM domain-containing rela... 107 4e-40
ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchor... 109 5e-40
ref|XP_003523446.1| PREDICTED: lysM domain-containing GPI-anchor... 107 1e-39
ref|XP_002307431.1| predicted protein [Populus trichocarpa] gi|2... 109 1e-39
>ref|XP_002300994.1| predicted protein [Populus trichocarpa] gi|222842720|gb|EEE80267.1|
predicted protein [Populus trichocarpa]
Length = 412
Score = 109 bits (272), Expect(3) = 3e-40
Identities = 60/93 (64%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Frame = +2
Query: 350 ITCSCVDGIHKSVSTRYKTCSSDIRLCLLLVWYSLAGLVSADQFRDAKSIPD-NVLDVGE 526
ITCSCVDGI KSVST YKT SD + Y AGLVSADQ ++A SI D +VLDVG+
Sbjct: 91 ITCSCVDGIRKSVSTHYKTRPSDTLSSIADSIY--AGLVSADQIKEANSIDDPSVLDVGQ 148
Query: 527 SSVIP*PCTCFNSTDNFLPAIYLSYLVMPMDLL 625
S V+P PCTCFN TDN LPAIYLSY+V +D L
Sbjct: 149 SLVVPLPCTCFNGTDNSLPAIYLSYVVKEVDTL 181
Score = 76.6 bits (187), Expect(3) = 3e-40
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = +3
Query: 126 LVHSKSTIEQCSNFDCCNAMFGFTFYTDLKVYEVVALFRIDLVSFRLTTNANDVSYPDV 302
LV SKSTIE C+N D CNA+ +T YTDLKV EV +LF+ID ++ LTTNA D+SYPDV
Sbjct: 19 LVTSKSTIEPCTNSDSCNALLAYTLYTDLKVSEVASLFQIDPIAL-LTTNAIDISYPDV 76
Score = 25.8 bits (55), Expect(3) = 3e-40
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 304 ENLILPSQLFLMTPI 348
EN ILPSQLFL PI
Sbjct: 77 ENHILPSQLFLKIPI 91
>gb|ACD56618.1| peptidoglycan-binding LysM domain-containing related protein
[Gossypioides kirkii]
Length = 453
Score = 107 bits (266), Expect(3) = 4e-40
Identities = 59/93 (63%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Frame = +2
Query: 350 ITCSCVDGIHKSVSTRYKTCSSDIRLCLLLVWYSLAGLVSADQFRDAKSIPD-NVLDVGE 526
I CSCVDGI KSVST+YKT D + Y AGLVSADQ R+A SI D +VLDVGE
Sbjct: 97 ILCSCVDGIRKSVSTKYKTRPQDTLSSIADSIY--AGLVSADQIREANSISDPSVLDVGE 154
Query: 527 SSVIP*PCTCFNSTDNFLPAIYLSYLVMPMDLL 625
+ V+P PCTCFN TDN LPAIYLSY+V +D L
Sbjct: 155 NLVVPLPCTCFNGTDNGLPAIYLSYVVKAVDTL 187
Score = 80.1 bits (196), Expect(3) = 4e-40
Identities = 43/83 (51%), Positives = 55/83 (66%)
Frame = +3
Query: 54 SLFTYSKSFLFIVKELAETFWLCTLVHSKSTIEQCSNFDCCNAMFGFTFYTDLKVYEVVA 233
+ F+Y + F++ F LV SKSTIE CSN D CNA+ G+T YTDLKV EV +
Sbjct: 7 TFFSYYVALCFMI------FSNVALVTSKSTIEPCSNSDSCNALLGYTLYTDLKVAEVAS 60
Query: 234 LFRIDLVSFRLTTNANDVSYPDV 302
LF++D +S LT NA D+SYPDV
Sbjct: 61 LFQVDPISI-LTANAIDISYPDV 82
Score = 24.3 bits (51), Expect(3) = 4e-40
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1
Query: 304 ENLILPSQLFLMTPI 348
EN ILPS+LFL PI
Sbjct: 83 ENHILPSKLFLKIPI 97
>ref|XP_004146785.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
[Cucumis sativus] gi|449528597|ref|XP_004171290.1|
PREDICTED: lysM domain-containing GPI-anchored protein
1-like [Cucumis sativus]
Length = 432
Score = 109 bits (273), Expect(3) = 5e-40
Identities = 59/93 (63%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +2
Query: 350 ITCSCVDGIHKSVSTRYKTCSSDIRLCLLLVWYSLAGLVSADQFRDAKSIPD-NVLDVGE 526
I+CSCVDGI KSVSTRYKT SD + Y AGLVS+DQ R+A SI D ++LDVG+
Sbjct: 102 ISCSCVDGIRKSVSTRYKTRPSDTLSSIADSIY--AGLVSSDQIREANSISDPSLLDVGQ 159
Query: 527 SSVIP*PCTCFNSTDNFLPAIYLSYLVMPMDLL 625
+ V+P PCTCFN TDN LPAIYLSY+V P D L
Sbjct: 160 TLVVPLPCTCFNGTDNSLPAIYLSYVVQPEDTL 192
Score = 75.9 bits (185), Expect(3) = 5e-40
Identities = 38/58 (65%), Positives = 45/58 (77%)
Frame = +3
Query: 129 VHSKSTIEQCSNFDCCNAMFGFTFYTDLKVYEVVALFRIDLVSFRLTTNANDVSYPDV 302
V +KSTIE CSN D CNA+ G+T YTDLKV EV +LF++D +S LT NA DVSYPDV
Sbjct: 31 VSAKSTIEPCSNSDSCNALLGYTLYTDLKVSEVGSLFQVDPISI-LTANAIDVSYPDV 87
Score = 25.4 bits (54), Expect(3) = 5e-40
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 304 ENLILPSQLFLMTPIN 351
EN ILPSQLF+ PI+
Sbjct: 88 ENHILPSQLFIKIPIS 103
>ref|XP_003523446.1| PREDICTED: lysM domain-containing GPI-anchored protein 1-like
[Glycine max]
Length = 417
Score = 107 bits (268), Expect(3) = 1e-39
Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Frame = +2
Query: 350 ITCSCVDGIHKSVSTRYKTCSSDIRLCLLLVWYSLAGLVSADQFRDAKSIPD-NVLDVGE 526
I+CSCVDGI KSV+T YKT SD + Y AGLVS+DQ R+A SI D +VLDVG+
Sbjct: 92 ISCSCVDGIRKSVATHYKTRPSDTLSSIADAVY--AGLVSSDQLREANSISDPSVLDVGQ 149
Query: 527 SSVIP*PCTCFNSTDNFLPAIYLSYLVMPMDLL 625
+ V+P PCTCFN +DN LPAIYLSY+V P+D L
Sbjct: 150 NLVVPLPCTCFNGSDNSLPAIYLSYVVRPVDTL 182
Score = 79.0 bits (193), Expect(3) = 1e-39
Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
Frame = +3
Query: 114 WLCTLVH--SKSTIEQCSNFDCCNAMFGFTFYTDLKVYEVVALFRIDLVSFRLTTNANDV 287
+LC L+ SKSTIE CSN D CNA+ G+T YTDLKV EV +LF+ID +S LT NA D+
Sbjct: 14 FLCLLLQASSKSTIEPCSNSDSCNALLGYTLYTDLKVSEVASLFQIDPISL-LTANAIDI 72
Query: 288 SYPDV 302
SYPDV
Sbjct: 73 SYPDV 77
Score = 22.7 bits (47), Expect(3) = 1e-39
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 304 ENLILPSQLFLMTPIN 351
E+ ILPS+LFL PI+
Sbjct: 78 EHHILPSKLFLKIPIS 93
>ref|XP_002307431.1| predicted protein [Populus trichocarpa] gi|222856880|gb|EEE94427.1|
predicted protein [Populus trichocarpa]
Length = 306
Score = 109 bits (272), Expect(3) = 1e-39
Identities = 60/93 (64%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Frame = +2
Query: 350 ITCSCVDGIHKSVSTRYKTCSSDIRLCLLLVWYSLAGLVSADQFRDAKSIPD-NVLDVGE 526
ITCSCVDGI KSVST YKT SD + Y AGLVSADQ ++A SI D +VLDVG+
Sbjct: 88 ITCSCVDGIRKSVSTHYKTRPSDTLSTIADSIY--AGLVSADQIKEANSIDDPSVLDVGQ 145
Query: 527 SSVIP*PCTCFNSTDNFLPAIYLSYLVMPMDLL 625
S V+P PCTCFN TDN LPAIYLSY+V +D L
Sbjct: 146 SLVVPLPCTCFNGTDNSLPAIYLSYVVKEVDTL 178
Score = 74.3 bits (181), Expect(3) = 1e-39
Identities = 38/59 (64%), Positives = 44/59 (74%)
Frame = +3
Query: 126 LVHSKSTIEQCSNFDCCNAMFGFTFYTDLKVYEVVALFRIDLVSFRLTTNANDVSYPDV 302
LV KSTIE CSN D CNA+ +T YTDLKV EV +LF+ID V+ LT NA D+SYPDV
Sbjct: 16 LVTPKSTIEPCSNSDSCNALLAYTLYTDLKVSEVASLFQIDPVAL-LTANAIDISYPDV 73
Score = 25.8 bits (55), Expect(3) = 1e-39
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1
Query: 304 ENLILPSQLFLMTPI 348
EN ILPSQLFL PI
Sbjct: 74 ENHILPSQLFLKIPI 88