BLASTX nr result

ID: Coptis23_contig00015392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015392
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259...    65   7e-09
emb|CBI28097.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_003620502.1| Extensin-like protein [Medicago truncatula] ...    63   3e-08
ref|NP_189091.1| leucine-rich repeat extensin-like protein 4 [Ar...    62   5e-08
ref|XP_003532491.1| PREDICTED: leucine-rich repeat extensin-like...    59   3e-07

>ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259389 [Vitis vinifera]
          Length = 752

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = +3

Query: 303 SSQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDP 434
           S+++  ISS   LTDAEV YI+ RQLLYYRDEFGDRGE+V+ DP
Sbjct: 26  SAEQISISSHGHLTDAEVMYIKRRQLLYYRDEFGDRGEDVTVDP 69


>emb|CBI28097.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = +3

Query: 303 SSQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDP 434
           S+++  ISS   LTDAEV YI+ RQLLYYRDEFGDRGE+V+ DP
Sbjct: 26  SAEQISISSHGHLTDAEVMYIKRRQLLYYRDEFGDRGEDVTVDP 69


>ref|XP_003620502.1| Extensin-like protein [Medicago truncatula]
           gi|355495517|gb|AES76720.1| Extensin-like protein
           [Medicago truncatula]
          Length = 838

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +3

Query: 315 TFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDP 434
           + +S  S LT+AE +YI+HRQLLYYRDEF DRGENV+ DP
Sbjct: 30  SIVSDGSHLTEAETQYIKHRQLLYYRDEFNDRGENVTVDP 69


>ref|NP_189091.1| leucine-rich repeat extensin-like protein 4 [Arabidopsis thaliana]
           gi|75334999|sp|Q9LHF1.1|LRX4_ARATH RecName:
           Full=Leucine-rich repeat extensin-like protein 4;
           Short=AtLRX4; Short=LRR/EXTENSIN4; AltName: Full=Cell
           wall hydroxyproline-rich glycoprotein; Flags: Precursor
           gi|9294099|dbj|BAB01951.1| extensin-like protein
           [Arabidopsis thaliana] gi|332643381|gb|AEE76902.1|
           leucine-rich repeat extensin-like protein 4 [Arabidopsis
           thaliana]
          Length = 494

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +3

Query: 306 SQETFISSTSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDP 434
           S    ISS + L+D EV++I+ RQLLYYRDEFGDRGENV+ DP
Sbjct: 23  SHSLSISSNAPLSDTEVRFIQRRQLLYYRDEFGDRGENVTVDP 65


>ref|XP_003532491.1| PREDICTED: leucine-rich repeat extensin-like protein 4-like
           [Glycine max]
          Length = 735

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +3

Query: 327 STSDLTDAEVKYIRHRQLLYYRDEFGDRGENVSTDP 434
           S S L+DAE  Y++ RQLLYYRDEFGDRGENV  DP
Sbjct: 30  SASSLSDAEAMYVKQRQLLYYRDEFGDRGENVIVDP 65


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