BLASTX nr result

ID: Coptis23_contig00015375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015375
         (1801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   669   0.0  
emb|CAN73016.1| hypothetical protein VITISV_004388 [Vitis vinifera]   664   0.0  
ref|XP_002280994.2| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   664   0.0  
ref|XP_004133919.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   663   0.0  
ref|XP_004155787.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   660   0.0  

>ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 433

 Score =  669 bits (1725), Expect = 0.0
 Identities = 337/428 (78%), Positives = 360/428 (84%)
 Frame = +1

Query: 25   MSQLKPISSHLDNIPSTPGKFKMDKSPYIHRLRWHFSLAKLSFWCXXXXXXXXXXXXXXX 204
            MSQLK +S HLDNIPSTPGKFKM+K     RLRWH SLAKL+FW                
Sbjct: 1    MSQLKQMS-HLDNIPSTPGKFKMEK-----RLRWHSSLAKLTFWSFVFLGLIFIFFFLSP 54

Query: 205  XXXXXXXXXXXXFLRNASWGGPAWEKXXXXXXXXXXXNGITVLVTGAAGFVGTHVSAALK 384
                         LR  SWGGPAWEK           NGI+VLVTGAAGFVGTHVSAALK
Sbjct: 55   SSSSLPSDPSRRSLRTYSWGGPAWEKRVRSSAKVRARNGISVLVTGAAGFVGTHVSAALK 114

Query: 385  RRGDGVLGLDNFNDYYEPTLKRARQALLERSGVFVVEGDINDEALLRKLFDVVAFSHVMH 564
            RRGDGV+GLDNFNDYY+P+LKRARQALLER+GVF+VEGDIND  LLRKLF+VVAF+HVMH
Sbjct: 115  RRGDGVVGLDNFNDYYDPSLKRARQALLERTGVFIVEGDINDSELLRKLFEVVAFTHVMH 174

Query: 565  LAAQAGVRYAMQNPSSYVHSNIAGLVNVLEVCKSANPQPSVVWASSSSVYGLNSKVPFSE 744
            LAAQAGVRYAM+NPSSYVHSNIAGLVN+LEVCKSANPQP++VWASSSSVYGLN+KVPFSE
Sbjct: 175  LAAQAGVRYAMENPSSYVHSNIAGLVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSE 234

Query: 745  RDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDIL 924
            RDRTDQPASLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFTKDIL
Sbjct: 235  RDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDIL 294

Query: 925  KGKSISIFEGPNHGTVARDFTYIDDIVKGCLASLDTAEXXXXXXXXXXXPAQLRVFNLGN 1104
            KGKSI IFE PNHGTVARDFTYIDDIVKGC+A+LDTAE           PAQLRVFNLGN
Sbjct: 295  KGKSIRIFEAPNHGTVARDFTYIDDIVKGCVAALDTAEKSTGSGGKKKGPAQLRVFNLGN 354

Query: 1105 TSPVPVTKLVSILERLLKVKANRVMLKMPRNGDVQFTHANITLAQRELGYKPSTDLQTGL 1284
            TSPVPVT LVSILERLLKVKA R M+KMPRNGDVQFTHANI+LAQRELGYKP+TDLQTGL
Sbjct: 355  TSPVPVTDLVSILERLLKVKAKRTMMKMPRNGDVQFTHANISLAQRELGYKPTTDLQTGL 414

Query: 1285 KKFVRWYL 1308
            KKFVRWY+
Sbjct: 415  KKFVRWYI 422


>emb|CAN73016.1| hypothetical protein VITISV_004388 [Vitis vinifera]
          Length = 427

 Score =  664 bits (1714), Expect = 0.0
 Identities = 333/420 (79%), Positives = 355/420 (84%)
 Frame = +1

Query: 49   SHLDNIPSTPGKFKMDKSPYIHRLRWHFSLAKLSFWCXXXXXXXXXXXXXXXXXXXXXXX 228
            SHLDNIPSTPGKFKM+K     RLRWH SLAKL+FW                        
Sbjct: 2    SHLDNIPSTPGKFKMEK-----RLRWHSSLAKLTFWSFVFLGLIFIFFFLSPSSSSLPSD 56

Query: 229  XXXXFLRNASWGGPAWEKXXXXXXXXXXXNGITVLVTGAAGFVGTHVSAALKRRGDGVLG 408
                 LR  SWGGPAWEK           NGI+VLVTGAAGFVGTHVSAALKRRGDGV+G
Sbjct: 57   PSRRSLRTYSWGGPAWEKRVRSSAKVXARNGISVLVTGAAGFVGTHVSAALKRRGDGVVG 116

Query: 409  LDNFNDYYEPTLKRARQALLERSGVFVVEGDINDEALLRKLFDVVAFSHVMHLAAQAGVR 588
            LDNFNDYY+P+LKRARQALLER+GVF+VEGDIND  LLRKLF+VVAF+HVMHLAAQAGVR
Sbjct: 117  LDNFNDYYDPSLKRARQALLERTGVFIVEGDINDSELLRKLFEVVAFTHVMHLAAQAGVR 176

Query: 589  YAMQNPSSYVHSNIAGLVNVLEVCKSANPQPSVVWASSSSVYGLNSKVPFSERDRTDQPA 768
            YAM+NPSSYVHSNIAGLVN+LEVCKSANPQP++VWASSSSVYGLN+KVPFSERDRTDQPA
Sbjct: 177  YAMENPSSYVHSNIAGLVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSERDRTDQPA 236

Query: 769  SLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIF 948
            SLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFTKDILKGKSI IF
Sbjct: 237  SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKSIRIF 296

Query: 949  EGPNHGTVARDFTYIDDIVKGCLASLDTAEXXXXXXXXXXXPAQLRVFNLGNTSPVPVTK 1128
            E PNHGTVARDFTYIDDIVKGC+A+LDTAE           PAQLRVFNLGNTSPVPVT 
Sbjct: 297  EAPNHGTVARDFTYIDDIVKGCVAALDTAEKSTGSGGKKKGPAQLRVFNLGNTSPVPVTD 356

Query: 1129 LVSILERLLKVKANRVMLKMPRNGDVQFTHANITLAQRELGYKPSTDLQTGLKKFVRWYL 1308
            LVSILERLLKVKA R M+KMPRNGDVQFTHANI+LAQRELGYKP+TDLQTGLKKFVRWY+
Sbjct: 357  LVSILERLLKVKAKRTMMKMPRNGDVQFTHANISLAQRELGYKPTTDLQTGLKKFVRWYI 416


>ref|XP_002280994.2| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 512

 Score =  664 bits (1713), Expect = 0.0
 Identities = 334/432 (77%), Positives = 359/432 (83%)
 Frame = +1

Query: 13   FYWSMSQLKPISSHLDNIPSTPGKFKMDKSPYIHRLRWHFSLAKLSFWCXXXXXXXXXXX 192
            F W  SQLK +S HLDNIPSTPGKFKM+K     RLRWH SLAKL+FW            
Sbjct: 76   FLWKKSQLKQMS-HLDNIPSTPGKFKMEK-----RLRWHSSLAKLTFWSFVFSGLIFIVL 129

Query: 193  XXXXXXXXXXXXXXXXFLRNASWGGPAWEKXXXXXXXXXXXNGITVLVTGAAGFVGTHVS 372
                             LR  SWGGPAWEK           NGI+VLVTGAAGFVGTHVS
Sbjct: 130  FLSPSSSSLPSDPTRRSLRTHSWGGPAWEKRVRSSAKVRARNGISVLVTGAAGFVGTHVS 189

Query: 373  AALKRRGDGVLGLDNFNDYYEPTLKRARQALLERSGVFVVEGDINDEALLRKLFDVVAFS 552
            AALKRRGDGV+GLDNFNDYY+P+LKRARQALLER+GVF+VEGDIND  LL+KLF+VVAF+
Sbjct: 190  AALKRRGDGVIGLDNFNDYYDPSLKRARQALLERTGVFIVEGDINDSKLLKKLFEVVAFT 249

Query: 553  HVMHLAAQAGVRYAMQNPSSYVHSNIAGLVNVLEVCKSANPQPSVVWASSSSVYGLNSKV 732
            HVMHLAAQAGVRYAM+NPSSYVHSNIAGLVN+LEVCKSANPQP++VWASSSSVYGLN+KV
Sbjct: 250  HVMHLAAQAGVRYAMENPSSYVHSNIAGLVNLLEVCKSANPQPAIVWASSSSVYGLNTKV 309

Query: 733  PFSERDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFT 912
            PFSERDRTDQPASLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFT
Sbjct: 310  PFSERDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFT 369

Query: 913  KDILKGKSISIFEGPNHGTVARDFTYIDDIVKGCLASLDTAEXXXXXXXXXXXPAQLRVF 1092
            +DILK KSI IFE PN GTVARDFTYIDDIVKGC+A+LDTAE           PAQLR+F
Sbjct: 370  RDILKEKSIPIFEAPNRGTVARDFTYIDDIVKGCVAALDTAEKSTGSGGKKKGPAQLRIF 429

Query: 1093 NLGNTSPVPVTKLVSILERLLKVKANRVMLKMPRNGDVQFTHANITLAQRELGYKPSTDL 1272
            NLGNTSPVPVT LVSILERLLKVKA R M+KMPRNGDVQFTHANI+LAQRELGYKP+TDL
Sbjct: 430  NLGNTSPVPVTDLVSILERLLKVKAKRKMIKMPRNGDVQFTHANISLAQRELGYKPTTDL 489

Query: 1273 QTGLKKFVRWYL 1308
            QTGLKKFVRWYL
Sbjct: 490  QTGLKKFVRWYL 501


>ref|XP_004133919.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Cucumis sativus]
          Length = 438

 Score =  663 bits (1710), Expect = 0.0
 Identities = 329/428 (76%), Positives = 360/428 (84%)
 Frame = +1

Query: 25   MSQLKPISSHLDNIPSTPGKFKMDKSPYIHRLRWHFSLAKLSFWCXXXXXXXXXXXXXXX 204
            MS++K + SHLDNIPSTPGKFKMDKSPYIHRLRWH SL KL+FW                
Sbjct: 1    MSEIK-VMSHLDNIPSTPGKFKMDKSPYIHRLRWHSSLTKLTFWSLVILGSILIFFFRSP 59

Query: 205  XXXXXXXXXXXXFLRNASWGGPAWEKXXXXXXXXXXXNGITVLVTGAAGFVGTHVSAALK 384
                         L    WGGPAWEK           NGI+VLVTGAAGFVGTHVS ALK
Sbjct: 60   SSSPLPSDHSRRSLSTYDWGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALK 119

Query: 385  RRGDGVLGLDNFNDYYEPTLKRARQALLERSGVFVVEGDINDEALLRKLFDVVAFSHVMH 564
            RRGDGVLGLDNFN+YY+ +LKRARQALLER+GVFVVEGDIND ALL+KLF+VV F+HVMH
Sbjct: 120  RRGDGVLGLDNFNNYYDQSLKRARQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMH 179

Query: 565  LAAQAGVRYAMQNPSSYVHSNIAGLVNVLEVCKSANPQPSVVWASSSSVYGLNSKVPFSE 744
            LAAQAGVRYAM+NPSSYVHSNIAGLV++LEVCKSANPQPS+VWASSSSVYGLN+KVPFSE
Sbjct: 180  LAAQAGVRYAMENPSSYVHSNIAGLVSLLEVCKSANPQPSIVWASSSSVYGLNTKVPFSE 239

Query: 745  RDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDIL 924
            +DRTDQPASLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFT+DIL
Sbjct: 240  KDRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDIL 299

Query: 925  KGKSISIFEGPNHGTVARDFTYIDDIVKGCLASLDTAEXXXXXXXXXXXPAQLRVFNLGN 1104
            KGKSI IFEG +HGTVARDFTYIDDIVKGCLA+LDTAE           PAQLRVFNLGN
Sbjct: 300  KGKSIPIFEGADHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKKGPAQLRVFNLGN 359

Query: 1105 TSPVPVTKLVSILERLLKVKANRVMLKMPRNGDVQFTHANITLAQRELGYKPSTDLQTGL 1284
            TSPVPV+ LVSILE+LLK+KA R ++K+PRNGDVQFTHANI+LAQRELGYKP+TDLQTGL
Sbjct: 360  TSPVPVSDLVSILEKLLKMKAKRNIMKLPRNGDVQFTHANISLAQRELGYKPTTDLQTGL 419

Query: 1285 KKFVRWYL 1308
            KKFVRWY+
Sbjct: 420  KKFVRWYM 427


>ref|XP_004155787.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Cucumis sativus]
          Length = 432

 Score =  660 bits (1702), Expect = 0.0
 Identities = 326/420 (77%), Positives = 354/420 (84%)
 Frame = +1

Query: 49   SHLDNIPSTPGKFKMDKSPYIHRLRWHFSLAKLSFWCXXXXXXXXXXXXXXXXXXXXXXX 228
            SHLDNIPSTPGKFKMDKSPYIHRLRWH SL KL+FW                        
Sbjct: 2    SHLDNIPSTPGKFKMDKSPYIHRLRWHSSLTKLTFWSLVILGSILIFFFRSPSSSPLPSD 61

Query: 229  XXXXFLRNASWGGPAWEKXXXXXXXXXXXNGITVLVTGAAGFVGTHVSAALKRRGDGVLG 408
                 L    WGGPAWEK           NGI+VLVTGAAGFVGTHVS ALKRRGDGVLG
Sbjct: 62   HSRRSLSTYDWGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALKRRGDGVLG 121

Query: 409  LDNFNDYYEPTLKRARQALLERSGVFVVEGDINDEALLRKLFDVVAFSHVMHLAAQAGVR 588
            LDNFN+YY+ +LKRARQALLER+GVFVVEGDIND ALL+KLF+VV F+HVMHLAAQAGVR
Sbjct: 122  LDNFNNYYDQSLKRARQALLERTGVFVVEGDINDSALLKKLFEVVPFTHVMHLAAQAGVR 181

Query: 589  YAMQNPSSYVHSNIAGLVNVLEVCKSANPQPSVVWASSSSVYGLNSKVPFSERDRTDQPA 768
            YAM+NPSSYVHSNIAGLV++LEVCKSANPQPS+VWASSSSVYGLN+KVPFSE+DRTDQPA
Sbjct: 182  YAMENPSSYVHSNIAGLVSLLEVCKSANPQPSIVWASSSSVYGLNTKVPFSEKDRTDQPA 241

Query: 769  SLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIF 948
            SLYAATKKAGEEIAHTYNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFT+DILKGKSI IF
Sbjct: 242  SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKSIPIF 301

Query: 949  EGPNHGTVARDFTYIDDIVKGCLASLDTAEXXXXXXXXXXXPAQLRVFNLGNTSPVPVTK 1128
            EG +HGTVARDFTYIDDIVKGCLA+LDTAE           PAQLRVFNLGNTSPVPV+ 
Sbjct: 302  EGADHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKKGPAQLRVFNLGNTSPVPVSD 361

Query: 1129 LVSILERLLKVKANRVMLKMPRNGDVQFTHANITLAQRELGYKPSTDLQTGLKKFVRWYL 1308
            LVSILE+LLK+KA R ++K+PRNGDVQFTHANI+LAQRELGYKP+TDLQTGLKKFVRWY+
Sbjct: 362  LVSILEKLLKMKAKRNIMKLPRNGDVQFTHANISLAQRELGYKPTTDLQTGLKKFVRWYM 421


Top