BLASTX nr result

ID: Coptis23_contig00015371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015371
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275144.1| PREDICTED: mitochondrial import inner membra...    97   1e-18
ref|XP_002518386.1| protein with unknown function [Ricinus commu...    92   4e-17
gb|AFK39368.1| unknown [Lotus japonicus]                               92   6e-17
gb|AFK37832.1| unknown [Medicago truncatula]                           91   1e-16
ref|XP_003607431.1| Mitochondrial import inner membrane transloc...    91   1e-16

>ref|XP_002275144.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim22 [Vitis vinifera] gi|297745845|emb|CBI15901.3|
           unnamed protein product [Vitis vinifera]
          Length = 170

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/109 (48%), Positives = 67/109 (61%)
 Frame = +2

Query: 128 SGSNEPGKAHIQPIEPPRPEDIYAQDFHDQIWFRSSLAGVXXXXXXXXXXXXXXSLDNPI 307
           S S E  K  I+PI  P  E+I  QD  +    RS  +GV              +LDNPI
Sbjct: 14  SSSTEAEKPQIEPIRMPTVEEIRGQDIWNNCAVRSVASGVMGGGLGLLMGLFLGALDNPI 73

Query: 308 TQDQMGAKKQFIYTAKQMGTKSLGFAKNFALMGFVFSAAEGVMEKTRAK 454
            Q++M A++QFIYTAKQMG++S G AK FA+MG +FSAAE V+EK RAK
Sbjct: 74  MQEEMTARQQFIYTAKQMGSRSWGSAKTFAVMGLIFSAAECVVEKARAK 122


>ref|XP_002518386.1| protein with unknown function [Ricinus communis]
           gi|223542481|gb|EEF44022.1| protein with unknown
           function [Ricinus communis]
          Length = 173

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 51/105 (48%), Positives = 61/105 (58%)
 Frame = +2

Query: 140 EPGKAHIQPIEPPRPEDIYAQDFHDQIWFRSSLAGVXXXXXXXXXXXXXXSLDNPITQDQ 319
           EP    IQP   P  E+I AQ+  D    RS  +GV              SLDNP+ QDQ
Sbjct: 18  EPEIPQIQPFRMPSMEEIRAQEVWDNCAVRSVASGVLGGGLGLFMGLLLGSLDNPLMQDQ 77

Query: 320 MGAKKQFIYTAKQMGTKSLGFAKNFALMGFVFSAAEGVMEKTRAK 454
           M  ++QFIYTAKQMG +S    K FA+MG VFSAAE ++EK RAK
Sbjct: 78  MTGREQFIYTAKQMGRRSWSSCKTFAVMGLVFSAAECIVEKARAK 122


>gb|AFK39368.1| unknown [Lotus japonicus]
          Length = 163

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/107 (46%), Positives = 65/107 (60%)
 Frame = +2

Query: 134 SNEPGKAHIQPIEPPRPEDIYAQDFHDQIWFRSSLAGVXXXXXXXXXXXXXXSLDNPITQ 313
           SNE  K  I+PI  P  E+I  QD  +    RS ++GV              +LDNPI Q
Sbjct: 10  SNEVEKPQIEPIRLPSVEEIRGQDIWNNCAVRSVVSGVMGGGLGIFMGLFLGALDNPIMQ 69

Query: 314 DQMGAKKQFIYTAKQMGTKSLGFAKNFALMGFVFSAAEGVMEKTRAK 454
           ++M  ++Q IY AKQMG +S+  AK FA+MGF+FSAAE V+EK RAK
Sbjct: 70  EEMTGRQQLIYQAKQMGRRSISSAKAFAVMGFIFSAAECVVEKARAK 116


>gb|AFK37832.1| unknown [Medicago truncatula]
          Length = 170

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/107 (47%), Positives = 64/107 (59%)
 Frame = +2

Query: 134 SNEPGKAHIQPIEPPRPEDIYAQDFHDQIWFRSSLAGVXXXXXXXXXXXXXXSLDNPITQ 313
           S E  K  IQP+  P  E+I  QD  +    RS ++GV              +LDNP+ Q
Sbjct: 16  SKEVEKPQIQPLSLPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGIAMGLFLGALDNPMMQ 75

Query: 314 DQMGAKKQFIYTAKQMGTKSLGFAKNFALMGFVFSAAEGVMEKTRAK 454
           +QM  K+QFI+ AKQMG +S   AK FA+MGFVFSAAE V+EK RAK
Sbjct: 76  EQMTGKQQFIFQAKQMGRRSWSSAKAFAVMGFVFSAAECVVEKARAK 122


>ref|XP_003607431.1| Mitochondrial import inner membrane translocase subunit TIM22
           [Medicago truncatula] gi|357474311|ref|XP_003607440.1|
           Mitochondrial import inner membrane translocase subunit
           TIM22 [Medicago truncatula] gi|355508486|gb|AES89628.1|
           Mitochondrial import inner membrane translocase subunit
           TIM22 [Medicago truncatula] gi|355508495|gb|AES89637.1|
           Mitochondrial import inner membrane translocase subunit
           TIM22 [Medicago truncatula]
          Length = 170

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/107 (47%), Positives = 64/107 (59%)
 Frame = +2

Query: 134 SNEPGKAHIQPIEPPRPEDIYAQDFHDQIWFRSSLAGVXXXXXXXXXXXXXXSLDNPITQ 313
           S E  K  IQP+  P  E+I  QD  +    RS ++GV              +LDNP+ Q
Sbjct: 16  SKEVEKPQIQPLSLPTVEEIRGQDIWNNCAVRSVVSGVMGGGLGIAMGLFLGALDNPMMQ 75

Query: 314 DQMGAKKQFIYTAKQMGTKSLGFAKNFALMGFVFSAAEGVMEKTRAK 454
           +QM  K+QFI+ AKQMG +S   AK FA+MGFVFSAAE V+EK RAK
Sbjct: 76  EQMTGKQQFIFQAKQMGRRSWSSAKAFAVMGFVFSAAECVVEKARAK 122


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