BLASTX nr result

ID: Coptis23_contig00015334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015334
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307193.1| predicted protein [Populus trichocarpa] gi|2...   573   e-161
ref|XP_002513391.1| peptidyl-prolyl cis-trans isomerase, putativ...   568   e-159
ref|XP_002266085.2| PREDICTED: peptidyl-prolyl cis-trans isomera...   561   e-157
emb|CBI21690.3| unnamed protein product [Vitis vinifera]              561   e-157
ref|XP_002891769.1| hypothetical protein ARALYDRAFT_474506 [Arab...   550   e-154

>ref|XP_002307193.1| predicted protein [Populus trichocarpa] gi|222856642|gb|EEE94189.1|
            predicted protein [Populus trichocarpa]
          Length = 542

 Score =  573 bits (1478), Expect = e-161
 Identities = 287/404 (71%), Positives = 325/404 (80%), Gaps = 6/404 (1%)
 Frame = +2

Query: 2    GGDSIYKFLYGDQARFFGDEIRPELKHSKKGTVAMASAGENLNASQFYFTLRDDLDYLDE 181
            GGDS+YKFLYGDQARFFGDEI  +LKHSK GTVAMASAGENLNASQFYFTLRDDLDYLD 
Sbjct: 62   GGDSVYKFLYGDQARFFGDEIHLDLKHSKMGTVAMASAGENLNASQFYFTLRDDLDYLDG 121

Query: 182  KHTVFGKVEEGFDTLERINEAYVDEKERPYKNIRIKHIHILDDPFDDPPQLAELIPDASP 361
            KHTVFG++ EG +TL RINEAYVDEK RP+KNIRIKH +ILDDPFDDP QLAELIP+ASP
Sbjct: 122  KHTVFGEIAEGLETLTRINEAYVDEKNRPFKNIRIKHAYILDDPFDDPSQLAELIPEASP 181

Query: 362  EGRPXXXXXXXXXXXXXWVPMDEQLGPAELEEVMREKEAHSSAVVLESIGDIPEAEVKPP 541
            EG+P             WVPMDEQLG AELEEV+R KEAHSSAVVLESIGDIPEAE KPP
Sbjct: 182  EGKPKDEVDGDVRLEDDWVPMDEQLGTAELEEVLRAKEAHSSAVVLESIGDIPEAETKPP 241

Query: 542  ENVLFVCKLNPVTEDEDLNTIFSRFGNVVSADIIRDFKTGDSLCYAFVEFETVEACEQAY 721
            +NVLFVCKLNPVTEDEDL+TIFSRFG V+SADIIRD+KTGDSLCYAF+EFET EACE AY
Sbjct: 242  DNVLFVCKLNPVTEDEDLHTIFSRFGTVISADIIRDYKTGDSLCYAFIEFETKEACELAY 301

Query: 722  FKMDNALIDDRRIHVDFSQSVSKLWSQFRRKENQMGK-GRGCFKCGALDHIAKECSGGPS 898
            FKMDNALIDDRRIHVDFSQSV+KLWSQFRRK+NQ GK GRGCFKCGALDH+AK+C+G P+
Sbjct: 302  FKMDNALIDDRRIHVDFSQSVAKLWSQFRRKDNQPGKAGRGCFKCGALDHMAKDCTGDPA 361

Query: 899  TTKQQPKYVLKDENTQMGGDGNSRYDMVFD---PLSSAEGK--SHHESDWKMDRQSTEGL 1063
               +  KY+LKD+N Q GGD NSRY+MVFD   P S  +GK   H + D+++DR+  +G 
Sbjct: 362  NKHRPSKYILKDDNMQRGGDNNSRYEMVFDGDTPESPRQGKRHGHRDPDYQIDREKKDG- 420

Query: 1064 KQRDREKRDNVGDKYRDGEKRRGYRDDVRNHESRRSSGGRKDEE 1195
                        ++YR  ++ RG+R D R  ES+   G R  EE
Sbjct: 421  -----------KERYRQSDRDRGHRQDTRYPESK--GGSRYPEE 451


>ref|XP_002513391.1| peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
            gi|223547299|gb|EEF48794.1| peptidyl-prolyl cis-trans
            isomerase, putative [Ricinus communis]
          Length = 587

 Score =  568 bits (1463), Expect = e-159
 Identities = 283/397 (71%), Positives = 318/397 (80%), Gaps = 7/397 (1%)
 Frame = +2

Query: 2    GGDSIYKFLYGDQARFFGDEIRPELKHSKKGTVAMASAGENLNASQFYFTLRDDLDYLDE 181
            GGDSIYKFLYGDQARFF DEI  +LKHSK GTVAMASAGENLNASQFYFTLRD LDYLD 
Sbjct: 73   GGDSIYKFLYGDQARFFSDEIHLDLKHSKTGTVAMASAGENLNASQFYFTLRDGLDYLDG 132

Query: 182  KHTVFGKVEEGFDTLERINEAYVDEKERPYKNIRIKHIHILDDPFDDPPQLAELIPDASP 361
            KHTVFG+V EG +TL RINEAYVD K RP+KNIRIKH +ILDDPFDDPPQL ELIPDASP
Sbjct: 133  KHTVFGEVAEGLETLTRINEAYVDTKNRPFKNIRIKHTYILDDPFDDPPQLTELIPDASP 192

Query: 362  EGRPXXXXXXXXXXXXXWVPMDEQLGPAELEEVMREKEAHSSAVVLESIGDIPEAEVKPP 541
            EG+P             WVPMDEQLGPAELEEV+R K+AHSSAVVLESIGDIP+AE+KPP
Sbjct: 193  EGKPKQEVEDEVRLEDDWVPMDEQLGPAELEEVLRAKDAHSSAVVLESIGDIPDAEMKPP 252

Query: 542  ENVLFVCKLNPVTEDEDLNTIFSRFGNVVSADIIRDFKTGDSLCYAFVEFETVEACEQAY 721
            +NVLFVCKLNPVTEDEDL+TIFSRFG V+SA+IIRDFKTGDSLCYAF+EFET E+CEQAY
Sbjct: 253  DNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSLCYAFIEFETKESCEQAY 312

Query: 722  FKMDNALIDDRRIHVDFSQSVSKLWSQFRRKENQMGKGRGCFKCGALDHIAKECSGGPST 901
            FKMDNALIDDRRIHVDFSQSV+K W+++RR+  QMGK RGCFKCGA DH AK+C+GGP T
Sbjct: 313  FKMDNALIDDRRIHVDFSQSVAKQWAEYRRRGGQMGKERGCFKCGAPDHTAKDCTGGPPT 372

Query: 902  TK-QQPKYVLKDENTQMGGDGNSRYDMVFD------PLSSAEGKSHHESDWKMDRQSTEG 1060
             + Q PKYVLKD+N Q GG  NSRY+MVFD      P        H     KM R+S E 
Sbjct: 373  KQLQPPKYVLKDDNMQHGGKNNSRYEMVFDGDTPESPRQEKRNGRHDPEREKMHRRSLED 432

Query: 1061 LKQRDREKRDNVGDKYRDGEKRRGYRDDVRNHESRRS 1171
            LK    EK+   GD +R  ++ RG+R+D R+HE + S
Sbjct: 433  LKHGAEEKKYQ-GDGHRQRDRNRGHREDDRHHEKKPS 468


>ref|XP_002266085.2| PREDICTED: peptidyl-prolyl cis-trans isomerase-like 4-like [Vitis
            vinifera]
          Length = 627

 Score =  561 bits (1446), Expect = e-157
 Identities = 279/406 (68%), Positives = 322/406 (79%), Gaps = 18/406 (4%)
 Frame = +2

Query: 2    GGDSIYKFLYGDQARFFGDEIRPELKHSKKGTVAMASAGENLNASQFYFTLRDDLDYLDE 181
            GGDSIYKFLYGDQARFF DE+  +LKHSK GTVAMASAGENLNASQFYFTLRDDLDYLD 
Sbjct: 62   GGDSIYKFLYGDQARFFNDEVHLDLKHSKTGTVAMASAGENLNASQFYFTLRDDLDYLDG 121

Query: 182  KHTVFGKVEEGFDTLERINEAYVDEKERPYKNIRIKHIHILDDPFDDPPQLAELIPDASP 361
            KHTVFG+V EG +TL RINEAYVD+K RPYKNIRIKH +ILDDPF DP QL ELIPDASP
Sbjct: 122  KHTVFGEVAEGLETLTRINEAYVDDKGRPYKNIRIKHTYILDDPFGDPSQLTELIPDASP 181

Query: 362  EGRPXXXXXXXXXXXXXWVPMDEQLGPAELEEVMREKEAHSSAVVLESIGDIPEAEVKPP 541
            EG+P             WVP+DEQL  +ELEE++R KEAHS AVVLESIGDIP+AE+KPP
Sbjct: 182  EGKPKDEVDDDVRLEDDWVPLDEQLDTSELEELIRSKEAHSRAVVLESIGDIPDAEIKPP 241

Query: 542  ENVLFVCKLNPVTEDEDLNTIFSRFGNVVSADIIRDFKTGDSLCYAFVEFETVEACEQAY 721
            +NVLFVCKLNPVTEDEDL+TIFSRFG V+SA+IIRDFKTGDSLCYAF+EFET EACEQAY
Sbjct: 242  DNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSLCYAFIEFETNEACEQAY 301

Query: 722  FKMDNALIDDRRIHVDFSQSVSKLWSQFRRKENQMGKGRGCFKCGALDHIAKECSGGPST 901
            FKMDNALIDDRRIHVDFSQSVSKLWSQ+RR+++Q GKG GCFKCGA+DHIAK+C+G P+ 
Sbjct: 302  FKMDNALIDDRRIHVDFSQSVSKLWSQYRRRDHQTGKGTGCFKCGAVDHIAKDCTGSPTK 361

Query: 902  TKQQPKYVLKDENTQMGGDGNSRYDMVFD------PLSSAEGKSHHESDW----KMDRQS 1051
             +Q PKY+LKD NTQ GGD NSRY+MVFD      P      + H   D     K++R+ 
Sbjct: 362  QQQPPKYILKDNNTQHGGDNNSRYEMVFDEDTSESPKREKRRQDHGPEDQIEKEKLNRRG 421

Query: 1052 TEGLKQRDREKRDNVGDKYRDGEKRR--------GYRDDVRNHESR 1165
            +E  K+RD +K+D+  D++R  +K +        G R D  +HE R
Sbjct: 422  SEDWKRRDHDKKDS-DDRHRQSDKGQESRASRLSGSRRDPYHHEER 466


>emb|CBI21690.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  561 bits (1446), Expect = e-157
 Identities = 279/406 (68%), Positives = 322/406 (79%), Gaps = 18/406 (4%)
 Frame = +2

Query: 2    GGDSIYKFLYGDQARFFGDEIRPELKHSKKGTVAMASAGENLNASQFYFTLRDDLDYLDE 181
            GGDSIYKFLYGDQARFF DE+  +LKHSK GTVAMASAGENLNASQFYFTLRDDLDYLD 
Sbjct: 62   GGDSIYKFLYGDQARFFNDEVHLDLKHSKTGTVAMASAGENLNASQFYFTLRDDLDYLDG 121

Query: 182  KHTVFGKVEEGFDTLERINEAYVDEKERPYKNIRIKHIHILDDPFDDPPQLAELIPDASP 361
            KHTVFG+V EG +TL RINEAYVD+K RPYKNIRIKH +ILDDPF DP QL ELIPDASP
Sbjct: 122  KHTVFGEVAEGLETLTRINEAYVDDKGRPYKNIRIKHTYILDDPFGDPSQLTELIPDASP 181

Query: 362  EGRPXXXXXXXXXXXXXWVPMDEQLGPAELEEVMREKEAHSSAVVLESIGDIPEAEVKPP 541
            EG+P             WVP+DEQL  +ELEE++R KEAHS AVVLESIGDIP+AE+KPP
Sbjct: 182  EGKPKDEVDDDVRLEDDWVPLDEQLDTSELEELIRSKEAHSRAVVLESIGDIPDAEIKPP 241

Query: 542  ENVLFVCKLNPVTEDEDLNTIFSRFGNVVSADIIRDFKTGDSLCYAFVEFETVEACEQAY 721
            +NVLFVCKLNPVTEDEDL+TIFSRFG V+SA+IIRDFKTGDSLCYAF+EFET EACEQAY
Sbjct: 242  DNVLFVCKLNPVTEDEDLHTIFSRFGTVISAEIIRDFKTGDSLCYAFIEFETNEACEQAY 301

Query: 722  FKMDNALIDDRRIHVDFSQSVSKLWSQFRRKENQMGKGRGCFKCGALDHIAKECSGGPST 901
            FKMDNALIDDRRIHVDFSQSVSKLWSQ+RR+++Q GKG GCFKCGA+DHIAK+C+G P+ 
Sbjct: 302  FKMDNALIDDRRIHVDFSQSVSKLWSQYRRRDHQTGKGTGCFKCGAVDHIAKDCTGSPTK 361

Query: 902  TKQQPKYVLKDENTQMGGDGNSRYDMVFD------PLSSAEGKSHHESDW----KMDRQS 1051
             +Q PKY+LKD NTQ GGD NSRY+MVFD      P      + H   D     K++R+ 
Sbjct: 362  QQQPPKYILKDNNTQHGGDNNSRYEMVFDEDTSESPKREKRRQDHGPEDQIEKEKLNRRG 421

Query: 1052 TEGLKQRDREKRDNVGDKYRDGEKRR--------GYRDDVRNHESR 1165
            +E  K+RD +K+D+  D++R  +K +        G R D  +HE R
Sbjct: 422  SEDWKRRDHDKKDS-DDRHRQSDKGQESRASRLSGSRRDPYHHEER 466


>ref|XP_002891769.1| hypothetical protein ARALYDRAFT_474506 [Arabidopsis lyrata subsp.
            lyrata] gi|297337611|gb|EFH68028.1| hypothetical protein
            ARALYDRAFT_474506 [Arabidopsis lyrata subsp. lyrata]
          Length = 508

 Score =  550 bits (1417), Expect = e-154
 Identities = 279/402 (69%), Positives = 311/402 (77%), Gaps = 4/402 (0%)
 Frame = +2

Query: 2    GGDSIYKFLYGDQARFFGDEIRPELKHSKKGTVAMASAGENLNASQFYFTLRDDLDYLDE 181
            GGDSIYKFLYG+QARFF DEI  +LKHSK GTVAMAS GENLNASQFYFTLRDDLDYLD 
Sbjct: 62   GGDSIYKFLYGEQARFFRDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDG 121

Query: 182  KHTVFGKVEEGFDTLERINEAYVDEKERPYKNIRIKHIHILDDPFDDPPQLAELIPDASP 361
            KHTVFG++ EGFDTL RINEAYVD K RPYKNIRIKHIHIL+DPFDDPPQLAE+IPDASP
Sbjct: 122  KHTVFGEIAEGFDTLTRINEAYVDAKNRPYKNIRIKHIHILEDPFDDPPQLAEMIPDASP 181

Query: 362  EGRPXXXXXXXXXXXXXWVPMDEQLGPAELEEVMREKEAHSSAVVLESIGDIPEAEVKPP 541
            EG+P             WVPMDE+LG  ELEEV+REK AHSSAVVLESIGDIPEAEVKPP
Sbjct: 182  EGKPKEEVEDDVRLEDDWVPMDEELGVQELEEVIREKAAHSSAVVLESIGDIPEAEVKPP 241

Query: 542  ENVLFVCKLNPVTEDEDLNTIFSRFGNVVSADIIRDFKTGDSLCYAFVEFETVEACEQAY 721
            +NVLFVCKLNPVTEDEDL+TIFSRFG VVSAD+IRDFKTGDSLCYAF+EFE  EACEQAY
Sbjct: 242  DNVLFVCKLNPVTEDEDLHTIFSRFGTVVSADVIRDFKTGDSLCYAFIEFENKEACEQAY 301

Query: 722  FKMDNALIDDRRIHVDFSQSVSKLWSQFRRKENQMGKGRGCFKCGALDHIAKECSGGPST 901
            FKMDNALIDDRRIHVDFSQSVSKLWSQFR+K++Q GKG GCFKCG+ DHIAK+C GG   
Sbjct: 302  FKMDNALIDDRRIHVDFSQSVSKLWSQFRQKDSQKGKGNGCFKCGSTDHIAKDCVGG--- 358

Query: 902  TKQQPKYVLKDENTQMGGDGNSRYDMVFD----PLSSAEGKSHHESDWKMDRQSTEGLKQ 1069
              Q  K+++KD+N Q G  G   YDMVF+     +   E     E   K+ R+S  G  +
Sbjct: 359  -NQPSKFIVKDQNRQHG--GGEGYDMVFEGDVPEIPKREHSHERERSEKIQRRSPHGNGE 415

Query: 1070 RDREKRDNVGDKYRDGEKRRGYRDDVRNHESRRSSGGRKDEE 1195
              R  RD V D  R  + R   R+  R H  R+    R+DE+
Sbjct: 416  GKRRHRDEVDDGRRQHD-REDAREMERKHRERKERESREDED 456


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