BLASTX nr result
ID: Coptis23_contig00015317
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00015317
(556 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524062.1| conserved hypothetical protein [Ricinus comm... 122 5e-40
emb|CBI32086.3| unnamed protein product [Vitis vinifera] 121 7e-40
ref|XP_003631297.1| PREDICTED: uncharacterized protein LOC100246... 121 7e-40
ref|XP_002322780.1| predicted protein [Populus trichocarpa] gi|2... 112 3e-37
ref|XP_004161305.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 106 3e-34
>ref|XP_002524062.1| conserved hypothetical protein [Ricinus communis]
gi|223536630|gb|EEF38272.1| conserved hypothetical
protein [Ricinus communis]
Length = 2100
Score = 122 bits (305), Expect(2) = 5e-40
Identities = 58/93 (62%), Positives = 76/93 (81%)
Frame = -1
Query: 556 SRLTPLLEKFAQIVLHFAFSALVVIQDMLRVLIVRIASQKPDSAIILLRPIISWIHDHVS 377
S+L+P L+K AQI+ H+A SALVV+QDMLRV ++RI SQK ++A +LLRPI+S IH+HVS
Sbjct: 1034 SQLSPQLDKIAQIIQHYAISALVVVQDMLRVFVIRIVSQKVENASVLLRPILSSIHNHVS 1093
Query: 376 EAHFLSDTDVFKVYRLLDFLASLLEHPCAKTLL 278
+ SDTD +KVY+ LDF+ S+LEHPCAK LL
Sbjct: 1094 DLSSPSDTDNYKVYKYLDFIGSILEHPCAKVLL 1126
Score = 67.8 bits (164), Expect(2) = 5e-40
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -3
Query: 260 LLRGGAVGILIKALDKCSSSYGPEGKLITESR-SYNCGFTLRNWCFPVFKSIALICGSQT 84
LL G IL K L+KC S + +LI++S S G T +WC PVFK ++L+ GSQT
Sbjct: 1126 LLAEGFPQILFKVLEKCFSFINLDERLISDSNTSAKYGCTSISWCLPVFKCLSLLLGSQT 1185
Query: 83 SLQQSGVYDNSGKMSVKDCSSILHHLL 3
SL G +D S S DCS IL +LL
Sbjct: 1186 SLVYPGRHDLSANFSNTDCSVILRYLL 1212
>emb|CBI32086.3| unnamed protein product [Vitis vinifera]
Length = 2230
Score = 121 bits (303), Expect(2) = 7e-40
Identities = 57/93 (61%), Positives = 76/93 (81%)
Frame = -1
Query: 556 SRLTPLLEKFAQIVLHFAFSALVVIQDMLRVLIVRIASQKPDSAIILLRPIISWIHDHVS 377
++LTP L+K +Q++LH+A ++LVVIQDMLRV I+RIA QK D+A +LL+PI+SWI +S
Sbjct: 1096 NQLTPQLDKISQVILHYAMTSLVVIQDMLRVFIIRIACQKADNASLLLQPIMSWIRMRLS 1155
Query: 376 EAHFLSDTDVFKVYRLLDFLASLLEHPCAKTLL 278
E+ +D D +K+YRLLDFLA LLEHPCAK LL
Sbjct: 1156 ESSCQTDVDAYKIYRLLDFLACLLEHPCAKPLL 1188
Score = 68.2 bits (165), Expect(2) = 7e-40
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = -3
Query: 260 LLRGGAVGILIKALDKCSSSYGPEGKLITESR-SYNCGFTLRNWCFPVFKSIALICGSQT 84
LL+ GA+ +LIKAL++C + +GK +++ R S C T +WC P+ KS++LICGS
Sbjct: 1188 LLKEGAIQMLIKALERCVDATESDGKQLSDGRNSAKCSLTAFSWCLPLCKSLSLICGSHM 1247
Query: 83 SLQQSGVY--DNSGKMSVKDCSSILHHLL 3
S G Y ++ +S +DCS IL +LL
Sbjct: 1248 SRHYIGNYAKNDFEHLSSEDCSLILPYLL 1276
>ref|XP_003631297.1| PREDICTED: uncharacterized protein LOC100246722 [Vitis vinifera]
Length = 2226
Score = 121 bits (303), Expect(2) = 7e-40
Identities = 57/93 (61%), Positives = 76/93 (81%)
Frame = -1
Query: 556 SRLTPLLEKFAQIVLHFAFSALVVIQDMLRVLIVRIASQKPDSAIILLRPIISWIHDHVS 377
++LTP L+K +Q++LH+A ++LVVIQDMLRV I+RIA QK D+A +LL+PI+SWI +S
Sbjct: 1096 NQLTPQLDKISQVILHYAMTSLVVIQDMLRVFIIRIACQKADNASLLLQPIMSWIRMRLS 1155
Query: 376 EAHFLSDTDVFKVYRLLDFLASLLEHPCAKTLL 278
E+ +D D +K+YRLLDFLA LLEHPCAK LL
Sbjct: 1156 ESSCQTDVDAYKIYRLLDFLACLLEHPCAKPLL 1188
Score = 68.2 bits (165), Expect(2) = 7e-40
Identities = 37/89 (41%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Frame = -3
Query: 260 LLRGGAVGILIKALDKCSSSYGPEGKLITESR-SYNCGFTLRNWCFPVFKSIALICGSQT 84
LL+ GA+ +LIKAL++C + +GK +++ R S C T +WC P+ KS++LICGS
Sbjct: 1188 LLKEGAIQMLIKALERCVDATESDGKQLSDGRNSAKCSLTAFSWCLPLCKSLSLICGSHM 1247
Query: 83 SLQQSGVY--DNSGKMSVKDCSSILHHLL 3
S G Y ++ +S +DCS IL +LL
Sbjct: 1248 SRHYIGNYAKNDFEHLSSEDCSLILPYLL 1276
>ref|XP_002322780.1| predicted protein [Populus trichocarpa] gi|222867410|gb|EEF04541.1|
predicted protein [Populus trichocarpa]
Length = 885
Score = 112 bits (281), Expect(2) = 3e-37
Identities = 57/93 (61%), Positives = 73/93 (78%)
Frame = -1
Query: 556 SRLTPLLEKFAQIVLHFAFSALVVIQDMLRVLIVRIASQKPDSAIILLRPIISWIHDHVS 377
++LTP L+K AQI+ H+A SALVVIQDMLRV I+RIA QK + A +LL+PI+ I +H+S
Sbjct: 565 NQLTPHLDKIAQIIEHYAISALVVIQDMLRVFIIRIACQKIEYASLLLQPILCCIRNHLS 624
Query: 376 EAHFLSDTDVFKVYRLLDFLASLLEHPCAKTLL 278
+ S+ D +KVYR LDFLAS+LEHPCAK LL
Sbjct: 625 DLTSPSEIDAYKVYRYLDFLASILEHPCAKELL 657
Score = 67.8 bits (164), Expect(2) = 3e-37
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Frame = -3
Query: 260 LLRGGAVGILIKALDKCSSSYGPEGKLITESR-SYNCGFTLRNWCFPVFKSIALICGSQT 84
LL G +L + L++C + G +GK I++S+ S GFTL +WC PVFKS +L+C +T
Sbjct: 657 LLEEGIAEMLTQVLERCLVAIGSDGKQISDSKISAKSGFTLISWCCPVFKSFSLLCVPRT 716
Query: 83 SLQQSGVYD--NSGKMSVKDCSSILHHLL 3
L +D +S +S KDCS IL +LL
Sbjct: 717 PLPYPVRHDLHSSASLSAKDCSLILPYLL 745
>ref|XP_004161305.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101218984 [Cucumis
sativus]
Length = 2182
Score = 106 bits (265), Expect(2) = 3e-34
Identities = 55/92 (59%), Positives = 66/92 (71%)
Frame = -1
Query: 553 RLTPLLEKFAQIVLHFAFSALVVIQDMLRVLIVRIASQKPDSAIILLRPIISWIHDHVSE 374
+L+ LEK +Q+V H+A S LVVIQDMLR+ I+R+ K DSA ILLRPI SWI VS+
Sbjct: 1079 QLSLQLEKISQVVQHYAISTLVVIQDMLRIFIIRLCCLKADSASILLRPIFSWIRARVSD 1138
Query: 373 AHFLSDTDVFKVYRLLDFLASLLEHPCAKTLL 278
LSD D +K+ R LDF ASLLEHP AK LL
Sbjct: 1139 LSSLSDIDAYKICRYLDFFASLLEHPRAKALL 1170
Score = 63.9 bits (154), Expect(2) = 3e-34
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Frame = -3
Query: 260 LLRGGAVGILIKALDKCSSSYGPEGKLITESR-SYNCGFTLRNWCFPVFKSIALICGSQT 84
LL + +LI+ +C + KLI R S CGF+L NWC PVFKS +L+C S+
Sbjct: 1170 LLNEDVIQLLIEVSHRCLDDLDTDEKLIAGCRFSTKCGFSLLNWCLPVFKSCSLLCYSRP 1229
Query: 83 SLQQSGVYD--NSGKMSVKDCSSILHHLL 3
SL+ G ++ + G +S +D S ILH +L
Sbjct: 1230 SLKHIGKHNLRHFGLLSAEDYSLILHSVL 1258