BLASTX nr result

ID: Coptis23_contig00015315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015315
         (1421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25555.3| unnamed protein product [Vitis vinifera]              325   2e-86
ref|XP_002263317.1| PREDICTED: protein SRG1 [Vitis vinifera]          325   2e-86
ref|XP_002263617.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|...   311   3e-86
ref|XP_002331015.1| predicted protein [Populus trichocarpa] gi|2...   321   3e-85
ref|XP_002263289.1| PREDICTED: protein SRG1-like [Vitis vinifera]     305   5e-84

>emb|CBI25555.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  325 bits (833), Expect = 2e-86
 Identities = 159/301 (52%), Positives = 214/301 (71%)
 Frame = -3

Query: 1005 KLKLALTTWGFFQAIGHNIPSSLLDEMQRKANEFFNLPMEEKKKYSINYDGKQDYLQGYG 826
            KL+ AL++WG FQAI H + SS LD+++    EFF LPMEEK+KYS   +     ++GYG
Sbjct: 71   KLRSALSSWGCFQAINHGMASSFLDKVRAVTKEFFALPMEEKQKYSRTLED----IEGYG 126

Query: 825  NDLVVSEDQLIDWSDRLYLLIKPLDQREYKHWPDNPNGFRKIINEYSMKTHLVAEIVLKY 646
            ND VV+E Q +DW+DRLYLL++P DQR+ K WP+NP+ FR  +NEY+ K   + EIVLK 
Sbjct: 127  NDTVVTEHQTLDWTDRLYLLVRPEDQRKLKLWPENPDTFRDTLNEYTEKLGQLTEIVLKA 186

Query: 645  MAKSLGLEENYFHSAVQENAPTFLRFNYYPPCSRPDLVYGVKPHADGGAITILLQDKEVE 466
            MAKSL L+++ F    +E A  + RFN YP C RPD++ G+KPHADG  IT LLQDKEVE
Sbjct: 187  MAKSLSLDDSCFLDHCREGALMYTRFNLYPVCPRPDVILGLKPHADGSTITFLLQDKEVE 246

Query: 465  GLQILKDGNWIKVPIVPHALLVNVADQVEIMSNGVFRSAVHRVITNTEKPRFSFAMFYVP 286
            GLQ+LKD  W+ VPI+P ALL+N+ DQ E+ SNG+F+S VHRV+TN+E+ R S A F +P
Sbjct: 247  GLQVLKDDQWVGVPIIPQALLINLGDQSELASNGIFKSLVHRVVTNSERERISVATFLLP 306

Query: 285  EKEMDLEPAKELITESRPRLFKKMKSEEYGELYFQRSSRGMRGIDNARV*FPNLMYVPSF 106
              +M++EPA  L+ E RPRL+KK+K+  Y  LYF    RG R I +++  F  L++  S+
Sbjct: 307  HPDMEIEPANGLVNEQRPRLYKKVKN--YVSLYFHNYQRGKRPIVHSKFKFIFLLFFISY 364

Query: 105  G 103
            G
Sbjct: 365  G 365


>ref|XP_002263317.1| PREDICTED: protein SRG1 [Vitis vinifera]
          Length = 377

 Score =  325 bits (833), Expect = 2e-86
 Identities = 159/301 (52%), Positives = 214/301 (71%)
 Frame = -3

Query: 1005 KLKLALTTWGFFQAIGHNIPSSLLDEMQRKANEFFNLPMEEKKKYSINYDGKQDYLQGYG 826
            KL+ AL++WG FQAI H + SS LD+++    EFF LPMEEK+KYS   +     ++GYG
Sbjct: 71   KLRSALSSWGCFQAINHGMASSFLDKVRAVTKEFFALPMEEKQKYSRTLED----IEGYG 126

Query: 825  NDLVVSEDQLIDWSDRLYLLIKPLDQREYKHWPDNPNGFRKIINEYSMKTHLVAEIVLKY 646
            ND VV+E Q +DW+DRLYLL++P DQR+ K WP+NP+ FR  +NEY+ K   + EIVLK 
Sbjct: 127  NDTVVTEHQTLDWTDRLYLLVRPEDQRKLKLWPENPDTFRDTLNEYTEKLGQLTEIVLKA 186

Query: 645  MAKSLGLEENYFHSAVQENAPTFLRFNYYPPCSRPDLVYGVKPHADGGAITILLQDKEVE 466
            MAKSL L+++ F    +E A  + RFN YP C RPD++ G+KPHADG  IT LLQDKEVE
Sbjct: 187  MAKSLSLDDSCFLDHCREGALMYTRFNLYPVCPRPDVILGLKPHADGSTITFLLQDKEVE 246

Query: 465  GLQILKDGNWIKVPIVPHALLVNVADQVEIMSNGVFRSAVHRVITNTEKPRFSFAMFYVP 286
            GLQ+LKD  W+ VPI+P ALL+N+ DQ E+ SNG+F+S VHRV+TN+E+ R S A F +P
Sbjct: 247  GLQVLKDDQWVGVPIIPQALLINLGDQSELASNGIFKSLVHRVVTNSERERISVATFLLP 306

Query: 285  EKEMDLEPAKELITESRPRLFKKMKSEEYGELYFQRSSRGMRGIDNARV*FPNLMYVPSF 106
              +M++EPA  L+ E RPRL+KK+K+  Y  LYF    RG R I +++  F  L++  S+
Sbjct: 307  HPDMEIEPANGLVNEQRPRLYKKVKN--YVSLYFHNYQRGKRPIVHSKFKFIFLLFFISY 364

Query: 105  G 103
            G
Sbjct: 365  G 365


>ref|XP_002263617.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|147790901|emb|CAN77231.1|
            hypothetical protein VITISV_002774 [Vitis vinifera]
            gi|296084536|emb|CBI25557.3| unnamed protein product
            [Vitis vinifera]
          Length = 356

 Score =  311 bits (796), Expect(2) = 3e-86
 Identities = 145/289 (50%), Positives = 208/289 (71%)
 Frame = -3

Query: 1005 KLKLALTTWGFFQAIGHNIPSSLLDEMQRKANEFFNLPMEEKKKYSINYDGKQDYLQGYG 826
            K K  LT+WG FQA+GH + SS LD+++    +FF LP+EEK+KYS   DG    ++GYG
Sbjct: 74   KFKSTLTSWGCFQAVGHGLSSSFLDKVREVGKQFFALPVEEKEKYSRATDG----IEGYG 129

Query: 825  NDLVVSEDQLIDWSDRLYLLIKPLDQREYKHWPDNPNGFRKIINEYSMKTHLVAEIVLKY 646
            ND ++SE+Q++DWS RL+L ++P+DQR+ + WP+NP  FR++++EY  K  ++ +++ K 
Sbjct: 130  NDPILSENQVLDWSYRLFLRLQPVDQRKLRLWPENPTEFREVLDEYGTKVKIIMDVLFKA 189

Query: 645  MAKSLGLEENYFHSAVQENAPTFLRFNYYPPCSRPDLVYGVKPHADGGAITILLQDKEVE 466
            MAKSL LEEN F S   E A    RFN+Y  C RPDLV GVKPH+D   IT+LLQDKEVE
Sbjct: 190  MAKSLNLEENSFSSRFGERAVMQTRFNFYLSCPRPDLVLGVKPHSDRSGITVLLQDKEVE 249

Query: 465  GLQILKDGNWIKVPIVPHALLVNVADQVEIMSNGVFRSAVHRVITNTEKPRFSFAMFYVP 286
            GLQ+ KD  W KVP++PHAL+VN+ DQ++IMSNG+F+S +HRV+TN+E+ R S AMF  P
Sbjct: 250  GLQVFKDDKWFKVPVIPHALVVNLGDQMQIMSNGIFKSPIHRVVTNSERMRISVAMFNEP 309

Query: 285  EKEMDLEPAKELITESRPRLFKKMKSEEYGELYFQRSSRGMRGIDNARV 139
            E E ++ P + LI E RPRL++ +K+  Y    F+   +G+  +++A++
Sbjct: 310  EPEKEIGPVEGLIDEKRPRLYRDVKN--YASFNFECFQKGVVPLESAKI 356



 Score = 35.8 bits (81), Expect(2) = 3e-86
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = -1

Query: 1214 LEKQVQELSINGDEPPPRYIRRDKDDVPINT 1122
            L + VQE+S+NG+EPPP+Y  ++    P+++
Sbjct: 13   LAQSVQEMSVNGNEPPPQYFLKENSIQPMDS 43


>ref|XP_002331015.1| predicted protein [Populus trichocarpa] gi|222872945|gb|EEF10076.1|
            predicted protein [Populus trichocarpa]
          Length = 347

 Score =  321 bits (822), Expect = 3e-85
 Identities = 154/289 (53%), Positives = 206/289 (71%)
 Frame = -3

Query: 1005 KLKLALTTWGFFQAIGHNIPSSLLDEMQRKANEFFNLPMEEKKKYSINYDGKQDYLQGYG 826
            K  LA ++WG FQ + H + SS LD+++  +  FF L ME+K+KYS     + D ++GYG
Sbjct: 65   KFHLAASSWGCFQVVNHGMTSSFLDKIRDVSKRFFALSMEDKQKYS----READSIEGYG 120

Query: 825  NDLVVSEDQLIDWSDRLYLLIKPLDQREYKHWPDNPNGFRKIINEYSMKTHLVAEIVLKY 646
            ND+++S+ Q IDWSDRLYL I P DQR+ K WP+NP  FR+ +NEY+MK   + EI+L+ 
Sbjct: 121  NDMILSDHQTIDWSDRLYLTISPEDQRKIKFWPENPKDFRETLNEYTMKLQEINEILLRA 180

Query: 645  MAKSLGLEENYFHSAVQENAPTFLRFNYYPPCSRPDLVYGVKPHADGGAITILLQDKEVE 466
            MA SL LEE+ F     E      RFN+YPPC RPD + GVKPHAD  AIT LLQDKEVE
Sbjct: 181  MAMSLNLEESSFLDQYGERPLVAARFNFYPPCPRPDRILGVKPHADASAITFLLQDKEVE 240

Query: 465  GLQILKDGNWIKVPIVPHALLVNVADQVEIMSNGVFRSAVHRVITNTEKPRFSFAMFYVP 286
            GLQ LKD  W +VPI+PHALL+NV DQVEIMSNG+F+S VHRV+TNTEK R + A+F +P
Sbjct: 241  GLQFLKDNQWFRVPIIPHALLINVGDQVEIMSNGIFKSPVHRVVTNTEKERNTLAVFCIP 300

Query: 285  EKEMDLEPAKELITESRPRLFKKMKSEEYGELYFQRSSRGMRGIDNARV 139
            + + +++PA  LI+E+RP L+KK+K  +Y  +YFQ   +G R I+  ++
Sbjct: 301  DSDKEIKPADGLISETRPSLYKKVK--DYVSIYFQYYQQGKRPIEAVKI 347


>ref|XP_002263289.1| PREDICTED: protein SRG1-like [Vitis vinifera]
          Length = 361

 Score =  305 bits (781), Expect(2) = 5e-84
 Identities = 147/292 (50%), Positives = 206/292 (70%)
 Frame = -3

Query: 1005 KLKLALTTWGFFQAIGHNIPSSLLDEMQRKANEFFNLPMEEKKKYSINYDGKQDYLQGYG 826
            KLK ALT+WG FQA+GH I SS LD+++    +FF LP+EEK+KYS   DG    ++GYG
Sbjct: 76   KLKSALTSWGCFQAVGHGISSSFLDKVREVGKQFFALPVEEKQKYSRATDG----IEGYG 131

Query: 825  NDLVVSEDQLIDWSDRLYLLIKPLDQREYKHWPDNPNGFRKIINEYSMKTHLVAEIVLKY 646
            N+ ++SE+Q++DWS RL L ++P+DQR+ + WP+NPN FR++++EY     ++ +++ K 
Sbjct: 132  NEPILSENQVLDWSYRLLLRLQPVDQRKLQLWPENPNEFREVLDEYGANVKIIMDVLFKA 191

Query: 645  MAKSLGLEENYFHSAVQENAPTFLRFNYYPPCSRPDLVYGVKPHADGGAITILLQDKEVE 466
            MA SL LEEN F S   E A    RFN+Y  C RPDLV G KPH+DG  IT+LLQ+KEVE
Sbjct: 192  MAMSLNLEENSFSSQFGERAVMQRRFNFYLSCPRPDLVLGFKPHSDGSGITVLLQNKEVE 251

Query: 465  GLQILKDGNWIKVPIVPHALLVNVADQVEIMSNGVFRSAVHRVITNTEKPRFSFAMFYVP 286
            GLQ+ KD  W +VPI+PHAL+VN+ DQ++IMSNG+F+SA+HRV+TN+E+ R   AMF  P
Sbjct: 252  GLQVFKDDKWFRVPIIPHALVVNLGDQMQIMSNGIFKSAIHRVVTNSERVRIPVAMFNEP 311

Query: 285  EKEMDLEPAKELITESRPRLFKKMKSEEYGELYFQRSSRGMRGIDNARV*FP 130
            E E ++ P   LI E RPRL+  +K+  Y    F+   +G++ +   R+ FP
Sbjct: 312  EPEKEIGPVDGLIDEKRPRLYTNVKN--YASFNFECFQKGLKRV---RILFP 358



 Score = 34.3 bits (77), Expect(2) = 5e-84
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = -1

Query: 1214 LEKQVQELSINGDEPPPRYIRRDKDDVPINT 1122
            L + VQE+S+NG+EPPP+Y  ++    P+++
Sbjct: 13   LGQSVQEMSMNGNEPPPQYFLKENSIHPMDS 43


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