BLASTX nr result

ID: Coptis23_contig00015312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015312
         (1241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACV70142.1| putative translocon-associated protein alpha subu...    93   2e-16
ref|XP_002275216.1| PREDICTED: translocon-associated protein sub...    92   3e-16
ref|XP_002529245.1| translocon-associated protein, alpha subunit...    92   4e-16
ref|XP_002305486.1| predicted protein [Populus trichocarpa] gi|1...    88   4e-15
gb|AFK48888.1| unknown [Medicago truncatula]                           88   5e-15

>gb|ACV70142.1| putative translocon-associated protein alpha subunit [Jatropha
           curcas]
          Length = 257

 Score = 92.8 bits (229), Expect = 2e-16
 Identities = 42/51 (82%), Positives = 47/51 (92%)
 Frame = -3

Query: 693 WIYGQIQNLSKKTKRSPKVEVGTGTTDASMDEWLQGTAYAQAASNKLKKKK 541
           WI+GQ+QNLSKKTKR+PKVEVGTGT DASMDEWLQGTAY Q+ S+K KKKK
Sbjct: 207 WIHGQVQNLSKKTKRAPKVEVGTGTRDASMDEWLQGTAYTQSLSSKFKKKK 257


>ref|XP_002275216.1| PREDICTED: translocon-associated protein subunit alpha [Vitis
           vinifera] gi|147821778|emb|CAN77171.1| hypothetical
           protein VITISV_029842 [Vitis vinifera]
           gi|297744658|emb|CBI37920.3| unnamed protein product
           [Vitis vinifera]
          Length = 253

 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -3

Query: 693 WIYGQIQNLSKKTKRSPKVEVGTGTTDASMDEWLQGTAYAQAASNKLKKKK 541
           WI GQIQNLSKKTKR+PKVEVGTGTTDAS+DEWLQGTAY Q+ S+K KKKK
Sbjct: 203 WIRGQIQNLSKKTKRAPKVEVGTGTTDASLDEWLQGTAYTQSLSSKSKKKK 253


>ref|XP_002529245.1| translocon-associated protein, alpha subunit, putative [Ricinus
           communis] gi|223531281|gb|EEF33123.1|
           translocon-associated protein, alpha subunit, putative
           [Ricinus communis]
          Length = 260

 Score = 91.7 bits (226), Expect = 4e-16
 Identities = 42/51 (82%), Positives = 46/51 (90%)
 Frame = -3

Query: 693 WIYGQIQNLSKKTKRSPKVEVGTGTTDASMDEWLQGTAYAQAASNKLKKKK 541
           WI+GQIQNLSKKTKR+PKVEVGTGT D S+DEWLQGTAY Q+ SNK KKKK
Sbjct: 210 WIHGQIQNLSKKTKRAPKVEVGTGTRDVSLDEWLQGTAYTQSLSNKSKKKK 260


>ref|XP_002305486.1| predicted protein [Populus trichocarpa] gi|118486855|gb|ABK95262.1|
           unknown [Populus trichocarpa]
           gi|222848450|gb|EEE85997.1| predicted protein [Populus
           trichocarpa]
          Length = 256

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = -3

Query: 693 WIYGQIQNLSKKTKRSPKVEVGTGTTDASMDEWLQGTAYAQAASNKLKKKK 541
           W+ GQIQNLSKKTKR+PKVEVGTGT DASMDEWL+GTA A++ S KLKKKK
Sbjct: 206 WVNGQIQNLSKKTKRAPKVEVGTGTRDASMDEWLEGTALAKSQSQKLKKKK 256


>gb|AFK48888.1| unknown [Medicago truncatula]
          Length = 256

 Score = 87.8 bits (216), Expect = 5e-15
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = -3

Query: 693 WIYGQIQNLSKKTKRSPKVEVGTGTTDASMDEWLQGTAYAQAASNKLKKKK 541
           WI+GQIQNLSKKTKR+PKVEVGT +TDAS DEWLQGTAY Q+ S+K KKKK
Sbjct: 206 WIHGQIQNLSKKTKRAPKVEVGTRSTDASTDEWLQGTAYTQSLSSKSKKKK 256


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