BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015308
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    79   6e-25
ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-21
ref|XP_003612197.1| F-box/kelch-repeat protein [Medicago truncat...    69   1e-20
ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus ...    70   1e-20
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    73   2e-20

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 79.0 bits (193), Expect(2) = 6e-25
 Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
 Frame = -1

Query: 595 FTGHISNLPSFSTKTIEKCYFSCFGHSYILNEYKILAFVLHNYTEXXXXXXXXXXGKLTL 416
           FTG    LP       ++  F  FG +   NEYK++  V +                L+ 
Sbjct: 148 FTGRYKELPKSLQYPDQEVVFG-FGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLS- 205

Query: 415 EAEVLTLGSGSWRRIRRVPYP--PRGEYISTNGAFHWLSLKRDELDCQLQIGSFDLAKEK 242
           + ++LTLG   WR + +V Y    R      NG  HW+S        + ++ SFDL  E+
Sbjct: 206 QVQILTLGCPGWRSLGKVSYRLVRRASETLVNGRLHWVSRPCRNKPAR-RLVSFDLTDEQ 264

Query: 241 FHLILLPSSMCNSFN---VNIGALGGCLSVVDFSSPKHVVEVWTMKQYGVQESWTRQYEI 71
           F  +  P   C   N    ++  L GCLSV  + +   + E+W MK+Y V+ESW ++Y I
Sbjct: 265 FREV--PKPDCGGLNRCDYHLAVLRGCLSVAVYCNYGRL-EIWVMKEYNVKESWVKEYNI 321

Query: 70  ------SMHDNL----------------RPLCLLKCGKVLFD 11
                  +  NL                R LC+LK G++L +
Sbjct: 322 GAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLE 363



 Score = 62.4 bits (150), Expect(2) = 6e-25
 Identities = 45/156 (28%), Positives = 73/156 (46%)
 Frame = -2

Query: 1065 EEDHKTVCSWNLPEEISLNIFSRLQIRYLLRCMCVCKSWQTIISDPYLVSMHLACAPLVN 886
            E+D +T     LP EI+ +I SRL I  L++  CVC++W+ +  DP +V+++L+C+    
Sbjct: 17   EDDPQTTGMELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQET 76

Query: 885  DPYLLLLVKDSIKVKDINPNFYPDPYYGFQTSSSTKLYTAENVGCIDEAVKXXXXXXXXX 706
            DP ++L     I+    N  ++ D     +     K   A     + E            
Sbjct: 77   DPCVILHCDFPIR----NNLYFVDFAAHEEEKEKVKRIRAPFSSMMPE------------ 120

Query: 705  XXXXXQHMSFGVEGSCNGLLCLARLKLPQEPIYVWN 598
                     F V GSCNGLLCL+   L  + +Y++N
Sbjct: 121  ---------FEVVGSCNGLLCLSD-SLFNDSLYIYN 146


>ref|XP_002330355.1| predicted protein [Populus trichocarpa] gi|222871559|gb|EEF08690.1|
           predicted protein [Populus trichocarpa]
          Length = 437

 Score = 82.0 bits (201), Expect(2) = 3e-21
 Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
 Frame = -1

Query: 613 YLCLESFTGHISNLPSFSTKTIEKCYFSCFGHSYILNEYKILAFVLHNYTEXXXXXXXXX 434
           YLC      +IS  P+   +T  +  F+  G+  I  EYK    VLH +           
Sbjct: 115 YLCNPILGEYISIPPAAGQETRHQSNFA-LGYCAIAKEYK----VLHTFCSKTGSYYQP- 168

Query: 433 XGKLTLEAEVLTLGSGSWRRIRRVPYPPRGEYISTN--GAFHWLSLKRDELDCQLQIGSF 260
                 EAE+ T+G+G WR I++     R   + +   G+ HW    RDE DC   IGSF
Sbjct: 169 ------EAEIYTIGTGKWRSIQKALLNLRMFIVDSFVCGSIHWEL--RDEDDCVNSIGSF 220

Query: 259 DLAKEKFHLILLPSSMCNSFNVNIGALGGCLSVVDF---SSPKHVVEVWTMKQYGVQESW 89
           +   E+F  + LP    +  +V + A  GCL V  F   S P++  E+W MK+YG +ESW
Sbjct: 221 NFENEQFSELSLPPRY-DEGDVTLTAFEGCLGVSFFHTYSDPQY--EIWIMKEYGNKESW 277

Query: 88  TRQYEI------SMHDNLRPLCLLKCGKVL 17
           T+Q+ +       ++D   PL  L  G +L
Sbjct: 278 TKQFTVKNLGFAKLYD---PLIFLNNGLIL 304



 Score = 47.0 bits (110), Expect(2) = 3e-21
 Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
 Frame = -2

Query: 1014 LNIFSRLQIRYLLRCMCVCKSWQTIISDPYLVSMHLACAPLVNDPYLLLLVKDSIKVKDI 835
            ++I SRL I+ +L C CVCK+W   ISD +   +HL  +P             S+ +K I
Sbjct: 1    MDILSRLPIKTILNCRCVCKTWLHYISDSFFAKLHLERSPT------------SLLLKTI 48

Query: 834  NPNFYPDPYYGFQTSSSTKLY--TAENVGCIDEAVKXXXXXXXXXXXXXXQHMSFGVEGS 661
            + N           S + +L   T + +G     V+               +  F +E S
Sbjct: 49   SNN---------PESRNLQLVQVTGKPLGLRFRVVEEMKFVPGINLP----YNDFLIENS 95

Query: 660  CNGLLCLAR 634
            CNGLLC+++
Sbjct: 96   CNGLLCISQ 104


>ref|XP_003612197.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355513532|gb|AES95155.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 380

 Score = 68.6 bits (166), Expect(2) = 1e-20
 Identities = 57/196 (29%), Positives = 95/196 (48%), Gaps = 8/196 (4%)
 Frame = -1

Query: 577 NLPSFSTKTIEKCYFSCFGHSYILNEYKILAFVLHNYTEXXXXXXXXXXGKLTLEAEVLT 398
           NL S S+ TI++  +  FG+  + ++YK+LA    +              ++T E  + T
Sbjct: 146 NLKSKSSPTIDRFIYYGFGYDQVNHKYKLLAVKAFS--------------RIT-ETMIYT 190

Query: 397 LGSGSWRRI--RRVP-YPPRGEYIS--TNGAFHWLSLKRDELDCQLQIGSFDLAKEKFHL 233
            G  S + +  +  P YPP  +++    +G  +W+    DE D +  I SFD+ KE +  
Sbjct: 191 FGENSCKNVEVKDFPRYPPNRKHLGKFVSGTLNWIV---DERDGRATILSFDIEKETYRQ 247

Query: 232 ILLPSSMCNSFNVNIGALGGCLSV-VDFSSPKHVVEVWTMKQYGVQESWTRQYEISMHDN 56
           +LLP      ++  +  L  C+ V   F   +   ++W MK+YGV ESWT+   I  H+N
Sbjct: 248 VLLPQHGYAVYSPGLYVLSNCICVCTSFLDTRW--QLWMMKKYGVAESWTKLMSIP-HEN 304

Query: 55  L--RPLCLLKCGKVLF 14
           L    + L  C + LF
Sbjct: 305 LLISNISLWPCVEPLF 320



 Score = 58.5 bits (140), Expect(2) = 1e-20
 Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 1/148 (0%)
 Frame = -2

Query: 1032 LPEEISLNIFSRLQIRYLLRCMCVCKSWQTIISDPYLVSMHLACAPLVNDPYLLLLVKDS 853
            LPEE+ + I  RL +R LLR  CVCKSW+T+ SD +  + H     L++  Y  L+  +S
Sbjct: 27   LPEELIVIILLRLPVRSLLRFKCVCKSWKTLFSDTHFANNHF----LISTVYPQLVACES 82

Query: 852  IKV-KDINPNFYPDPYYGFQTSSSTKLYTAENVGCIDEAVKXXXXXXXXXXXXXXQHMSF 676
            +   +      Y  P      +SST +    N G                      H  +
Sbjct: 83   VSAYRTWEIKTY--PIESLLENSSTTVIPVSNTG----------------------HQRY 118

Query: 675  GVEGSCNGLLCLARLKLPQEPIYVWNLS 592
             + GSCNG LCL      Q  + +WN S
Sbjct: 119  TILGSCNGFLCL--YDNYQRCVRLWNPS 144


>ref|XP_002516807.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223543895|gb|EEF45421.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 358

 Score = 70.1 bits (170), Expect(2) = 1e-20
 Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
 Frame = -1

Query: 538 YFSCFGHSYILNEYKILAFVLHNYTEXXXXXXXXXXGKLTLEAEVLTLGSGSWRRIRRVP 359
           Y   FG+++ +N+YK++                           V ++   SWR +   P
Sbjct: 147 YMYGFGYAHSINDYKLVKISCRGCVF------------------VYSVKENSWRSVGGFP 188

Query: 358 YP--PRGEYISTNGAFHWL-SLKRDELDCQLQIGSFDLAKEKFHLILLPSSMCNSFNVNI 188
           Y        I  NGA HW+ S  +D    Q+ IG+FDL +EKF  +  P S+ N +   I
Sbjct: 189 YSILALDPGIQLNGAIHWVVSRSKDSTKSQI-IGAFDLVEEKFWDVPPPVSVHNFYG--I 245

Query: 187 GALGGCLSVVDFSSPKHVVEVWTMKQYGVQESWTRQYEISMHDNLRPLCLLKCGKVLFD 11
           G  G CL ++  S      + W MK+YG+++SWT+      +  ++PL +    K L +
Sbjct: 246 GVFGECLCILPGSDVTSHNDFWVMKRYGIRDSWTKVVINISYFRMKPLGVFDNHKALLE 304



 Score = 56.6 bits (135), Expect(2) = 1e-20
 Identities = 45/137 (32%), Positives = 61/137 (44%), Gaps = 4/137 (2%)
 Frame = -2

Query: 1035 NLPEEISLNIFSRLQIRYLLRCMCVCKSWQTIISDPYLVSMHLACAPLVN----DPYLLL 868
            NL +++ L+I  RL ++ L R   VCKSW  +ISDP+ +SMHL+ A   N      + L 
Sbjct: 3    NLVQDVVLHILLRLPVKSLCRFKVVCKSWWLLISDPHFISMHLSLATKNNCINCHRWRLC 62

Query: 867  LVKDSIKVKDINPNFYPDPYYGFQTSSSTKLYTAENVGCIDEAVKXXXXXXXXXXXXXXQ 688
            L   S+      P+ Y   Y     + + KL       C DE VK               
Sbjct: 63   LTSFSL------PSVYSVGYEASDRAIAIKLGYPLKSDCYDE-VKFI------------- 102

Query: 687  HMSFGVEGSCNGLLCLA 637
                   GSCNGLLC+A
Sbjct: 103  -------GSCNGLLCVA 112


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 72.8 bits (177), Expect(2) = 2e-20
 Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 10/184 (5%)
 Frame = -1

Query: 526 FGHSYILNEYKILAFVLHNYTEXXXXXXXXXXGKLTLEAEVLTLGSGSWRRIRR----VP 359
           FG+    + YK++A   +              G+   + +VLTLG+ SWRRI+     +P
Sbjct: 189 FGYDRFADSYKVVAIFCYE-----------CDGRYETQVKVLTLGTDSWRRIQEFPSGLP 237

Query: 358 YPPRGEYISTNGAFHWLSLKRDELDCQLQIGSFDLAKEKFHLILLPSSMCNSFNVNIGAL 179
           +   G+++S  G  +WL+         L I S DL KE +  +L P       N+ +G L
Sbjct: 238 FDESGKFVS--GTVNWLASNDSS---SLIIVSLDLHKESYEEVLQPYYGVAVVNLTLGVL 292

Query: 178 GGCLSVVDFSSPKHVVEVWTMKQYGVQESWTRQYEI---SMHDN---LRPLCLLKCGKVL 17
             CL V+  +     ++VW MK YG +ESWT+ + +    + D+    + LC+ +  +VL
Sbjct: 293 RDCLCVLSHADT--FLDVWLMKDYGNKESWTKLFRVPYMGISDSYLYTKALCISEDDQVL 350

Query: 16  FDCN 5
            + N
Sbjct: 351 MEFN 354



 Score = 53.1 bits (126), Expect(2) = 2e-20
 Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 2/149 (1%)
 Frame = -2

Query: 1032 LPEEISLNIFSRLQIRYLLRCMCVCKSWQTIISDPYLVSMHLACAPLVNDPYLLLLVKDS 853
            LP E+   I  RL +++LL+  CVCKSW+++IS P     HL  +P        L+   +
Sbjct: 47   LPIELIQEILQRLPVKFLLQLRCVCKSWKSLISHPQFAKNHLHSSPTAT----RLIAGFT 102

Query: 852  IKVKDINPNFYP--DPYYGFQTSSSTKLYTAENVGCIDEAVKXXXXXXXXXXXXXXQHMS 679
               ++     YP  D +     +++   Y   N  C D  V                   
Sbjct: 103  NPAREFILRAYPLSDVFNAVAVNATELRYPFNNRKCYDFIV------------------- 143

Query: 678  FGVEGSCNGLLCLARLKLPQEPIYVWNLS 592
                GSC+G+LC A   + Q    +WN S
Sbjct: 144  ----GSCDGILCFA---VDQRRALLWNPS 165