BLASTX nr result

ID: Coptis23_contig00015284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015284
         (1599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269363.1| PREDICTED: uncharacterized protein LOC100255...   363   5e-98
ref|XP_002513009.1| DNA binding protein, putative [Ricinus commu...   340   6e-91
ref|XP_002305468.1| predicted protein [Populus trichocarpa] gi|2...   300   6e-79
ref|XP_004170187.1| PREDICTED: uncharacterized protein LOC101227...   299   1e-78
ref|XP_004148549.1| PREDICTED: uncharacterized protein LOC101216...   298   4e-78

>ref|XP_002269363.1| PREDICTED: uncharacterized protein LOC100255631 [Vitis vinifera]
          Length = 589

 Score =  363 bits (933), Expect = 5e-98
 Identities = 224/439 (51%), Positives = 269/439 (61%), Gaps = 20/439 (4%)
 Frame = -1

Query: 1257 MEDREKNGNEAMQRLQSSFGTTQQS------SINRFEMPQLNTSSLQGHGNMRFFTPNFS 1096
            M D E+   + +QRLQSSFGT+  S      S+N+ ++PQLN SS      MR F+PNFS
Sbjct: 1    MGDTEEANIDMIQRLQSSFGTSSSSIQKQPMSMNQLDIPQLNASSQIRAPMMRHFSPNFS 60

Query: 1095 PESSNSKRXXXXXXXXXXXXXXPFSQIPVSRISTQQPSLQNLSPGPTHSRSLSQPAIFSF 916
             +SS  +               P+SQIPV R + QQ   QN SPGP+HSRSLSQP+ FS 
Sbjct: 61   GDSSK-RHGFPPSHPHQIPPISPYSQIPVPRPANQQLVSQNFSPGPSHSRSLSQPSFFSL 119

Query: 915  DXXXXXXXXXXXSNYREC--TXXXXXXXXXXSMEDRDGGMHASQPFSSG---RANSARSG 751
            D             YR+   T          SMEDRD   H+  P S     R NS R G
Sbjct: 120  DSLPPLSPSP----YRDSSSTSISDAVSADISMEDRDASSHSVLPPSPSPFSRGNSMRVG 175

Query: 750  ESSLPPRKGHRRSISDIPFGYATVXXXXXXXXXXXXQGNLNQSAFVREN-LGNVNPVQLV 574
            E+ LPPRK HRRS SDIPFG++++             G L +S   R+N +    PVQLV
Sbjct: 176  EN-LPPRKAHRRSSSDIPFGFSSIMQSSPPLIPLRGSGALERSMSGRDNNMAAAKPVQLV 234

Query: 573  KREGEWDKNGGKSAEGMDERKSEGDAIDDLFSAYLNLDNVELLNSPETKVKNFNDIRDDL 394
            KRE  W++ G  +AEGM ERKSEG+ +DDL SAY+NLDN++ LNSP T+ KN  + R+DL
Sbjct: 235  KRESSWERGGDSNAEGMGERKSEGEVVDDLLSAYMNLDNIDALNSPGTEEKNGTENREDL 294

Query: 393  DSRASGTKMSGGDSSDNETGSSANESGCSITQTNLCSSKNK-EAFKRSAGEDIAPANRHR 217
            DSRASGTK +GGDSSDNE  SS NESG S+ +    SS  K E  KRSAG DIAP  RH 
Sbjct: 295  DSRASGTKTNGGDSSDNEAESSVNESGNSMQKLGTSSSAEKREGVKRSAGGDIAPTTRHY 354

Query: 216  RSVSMDSFMGNLPNFGDESLKL-------PASVANQTSVDGISSNFSLDFANGEFSGPEL 58
            RSVSMDSFMG + NFGDES KL       P  ++   S+DG S+ FSL+F NGEFSG EL
Sbjct: 355  RSVSMDSFMGKM-NFGDESPKLLPSPGTRPGQLSPSNSMDGNSATFSLEFGNGEFSGAEL 413

Query: 57   KKIMANEKLAEIASADPKR 1
            KKIMANEKLAEIA  DPKR
Sbjct: 414  KKIMANEKLAEIALTDPKR 432


>ref|XP_002513009.1| DNA binding protein, putative [Ricinus communis]
            gi|223548020|gb|EEF49512.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 574

 Score =  340 bits (872), Expect = 6e-91
 Identities = 218/435 (50%), Positives = 255/435 (58%), Gaps = 16/435 (3%)
 Frame = -1

Query: 1257 MEDREKNGNEAMQRLQSSFGTTQQSS-------INRFEMPQLNTSSLQGHGNMRFFTPNF 1099
            M D E+  +E MQRL SSFGTTQ SS       + + E+P LN +  +   +   F  NF
Sbjct: 1    MGDTEEANSEMMQRLHSSFGTTQSSSKQQPFSSMTQLEIPHLNQTQNRAR-HFAHFAQNF 59

Query: 1098 SPESSNSKRXXXXXXXXXXXXXXPFSQIPVSRISTQQPSLQNLSPGPTHSRSLSQPAIFS 919
            S +SS  +               P+SQIPVSR   QQ   QN SPGPTHSRSLSQP+ F 
Sbjct: 60   STDSSK-RIGIPPSHPNQIPPISPYSQIPVSRPGNQQMGSQNFSPGPTHSRSLSQPSSF- 117

Query: 918  FDXXXXXXXXXXXSNYRECTXXXXXXXXXXSMEDRDGGMHASQPFSS-GRANSARSGESS 742
            F                  T          SME+RD   H+  P S   R N++R  ES 
Sbjct: 118  FSLDSLPPLSPAPFRDSSSTSVADPVSTDVSMEERDANSHSLLPPSPFNRGNASRVAES- 176

Query: 741  LPPRKGHRRSISDIPFGYATVXXXXXXXXXXXXQGNLNQSAFVRENLGNVNPVQLVKREG 562
            LPPRK HRRS SDIPFG + V             G L +S   +EN     P QLVK+E 
Sbjct: 177  LPPRKAHRRSNSDIPFGLSYVMQSSPPLIPLRPSGGLERSVSGKENSSVAKPTQLVKKE- 235

Query: 561  EWDKNGGKSAEGMDERKSEGDAIDDLFSAYLNLDNVELLNSPETKVKNFNDIRDDLDSRA 382
             W++     AEGM ERKSEG+ +DDLFSAY+NLD ++ LNS  T  KN N+ R+DLDSRA
Sbjct: 236  -WERGNDSIAEGMGERKSEGEVVDDLFSAYMNLDTIDALNSSGTDDKNGNENREDLDSRA 294

Query: 381  SGTKMSGGDSSDNETGSSANESGCSITQTNLCSSKNK-EAFKRSAGEDIAPANRHRRSVS 205
            SGTK +GGDSSDNE  SS NESG S+ +  + SS  K E  KRSAG DIAP  RH RSVS
Sbjct: 295  SGTKTNGGDSSDNEAESSVNESGSSLLRAGVNSSTEKREGIKRSAGGDIAPTTRHYRSVS 354

Query: 204  MDSFMGNLPNFGDESLKLPAS-------VANQTSVDGISSNFSLDFANGEFSGPELKKIM 46
            MDSFMG L NFGDES KLP S       ++   S+DG  + FSLDF NGEFSG ELKKIM
Sbjct: 355  MDSFMGKL-NFGDESPKLPPSPGSRPGQLSPSNSIDG--NAFSLDFGNGEFSGAELKKIM 411

Query: 45   ANEKLAEIASADPKR 1
            ANEKLAEIA  DPKR
Sbjct: 412  ANEKLAEIALTDPKR 426


>ref|XP_002305468.1| predicted protein [Populus trichocarpa] gi|222848432|gb|EEE85979.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  300 bits (769), Expect = 6e-79
 Identities = 179/332 (53%), Positives = 205/332 (61%), Gaps = 6/332 (1%)
 Frame = -1

Query: 978 QNLSPGPTHSRSLSQPAIFSFDXXXXXXXXXXXSNYRECTXXXXXXXXXXSMEDRDGGMH 799
           Q+ S GPTHSRSLSQP+ F F                              ME++DGG H
Sbjct: 4   QSFSLGPTHSRSLSQPSSF-FSLDSLPPLSPAPFRDSSSPSVSDPISTDVFMEEKDGGSH 62

Query: 798 ASQPFSSGRANSARSGESSLPPRKGHRRSISDIPFGYATVXXXXXXXXXXXXQGNLNQSA 619
           +  P S     +A     SLPPRK HRRS SDIPFG A V               L +S 
Sbjct: 63  SLLPPSPFNRGNAPRVVESLPPRKAHRRSNSDIPFGLANVLQCSPPLIPSRGSSGLERSM 122

Query: 618 FVRENLGNVNPVQLVKREGEWDKNGGKSAEGMDERKSEGDAIDDLFSAYLNLDNVELLNS 439
             RENLG   P Q VK+E  W++ G  +AEGM ERKSEG+ +DDLFSAY+NLDN+++LNS
Sbjct: 123 SGRENLGMAKPAQSVKKE--WERGGDSNAEGMGERKSEGEVVDDLFSAYMNLDNIDVLNS 180

Query: 438 PETKVKNFNDIRDDLDSRASGTKMSGGDSSDNETGSSANESGCSITQTNLCSSKNK-EAF 262
             T  KN N+ R+DLDSRASGTK +GGDSSDNE  SS NESG ++ +  L SS  K E  
Sbjct: 181 SGTDDKNGNENREDLDSRASGTKTNGGDSSDNEAESSVNESGGNLPRAGLSSSTEKREGI 240

Query: 261 KRSAGEDIAPANRHRRSVSMDSFMGNLPNFGDESLKLPASVANQ----TSVDGISSN-FS 97
           KRSAG DIAP  RH RSVSMDSFMG L NFG+ES KLP S   +    +  D I  N FS
Sbjct: 241 KRSAGGDIAPTTRHYRSVSMDSFMGKL-NFGNESPKLPPSPGTRPGQLSPTDSIDGNAFS 299

Query: 96  LDFANGEFSGPELKKIMANEKLAEIASADPKR 1
           LDF NGEFSG ELKKIMANEKLAEIA ADPKR
Sbjct: 300 LDFGNGEFSGAELKKIMANEKLAEIALADPKR 331


>ref|XP_004170187.1| PREDICTED: uncharacterized protein LOC101227308 [Cucumis sativus]
          Length = 566

 Score =  299 bits (766), Expect = 1e-78
 Identities = 203/435 (46%), Positives = 249/435 (57%), Gaps = 16/435 (3%)
 Frame = -1

Query: 1257 MEDREKNGNEAMQR-LQSSFGTTQQSSINR-FEMPQLNTSSLQGHG-NMRFFTPNFSPES 1087
            M D E    E M+  LQ S+G +  S+ N  F M QL  S +       + F  NF  ++
Sbjct: 1    MGDTEDVNTENMRNHLQCSYGVSSSSAGNLPFSMDQLKISQMNSSQIRPQHFHSNFLGDN 60

Query: 1086 SNSKRXXXXXXXXXXXXXXPFSQIPVSRISTQQPSLQNLSPGPTHSRSLSQPAIFSFDXX 907
            S                  P+SQIP+SR   QQ    N +P PTHSRSLSQP+ FS D  
Sbjct: 61   SRRIGIPPSPNSPQIPPISPYSQIPISRPMNQQ----NYNPVPTHSRSLSQPSFFSLDSL 116

Query: 906  XXXXXXXXXSNYREC--TXXXXXXXXXXSMEDRDGGMHASQPFSSG-RANSARSGESSLP 736
                       +RE   T          SMEDRD   H+  P S   R NS++ G+S LP
Sbjct: 117  PPLSPSP----FRESPTTSNSDQVSADTSMEDRDNSSHSLLPPSPYMRVNSSKMGDS-LP 171

Query: 735  PRKGHRRSISDIPFGYATVXXXXXXXXXXXXQGNLNQSAFVRENLGNVNPV-QLVKREGE 559
            PRK HRRS SDIPFG +++             G L +S   +EN G + P  Q VKRE  
Sbjct: 172  PRKAHRRSNSDIPFGLSSMIQPSPLLPFNSS-GGLERSTSSKENAGLLKPSSQFVKREHS 230

Query: 558  WDKNGGKSAEGMDERKSEGDAIDDLFSAYLNLDNVELLNSPETKVKNFNDIRDDLDSRAS 379
             +K+   + EGM ERKS+GD++DDLFSAY+NLD+++L NS  T  KN ++ R+DLDSR S
Sbjct: 231  LEKSVDNNLEGMGERKSDGDSVDDLFSAYMNLDHIDLFNSSGTNDKNGHENREDLDSRGS 290

Query: 378  GTKMSGGDSSDNETGSSANESGCSITQTNLCSSKNK-EAFKRSAGEDIAPANRHRRSVSM 202
            GTK +GG+SSDNE  SS NESG S     L SS  K E  KR+AG DIAP  RH RSVSM
Sbjct: 291  GTKTNGGESSDNEAESSVNESGDSAQMPGLNSSAEKREGIKRTAGGDIAPTTRHYRSVSM 350

Query: 201  DSFMGNLPNFGDESLKL--------PASVANQTSVDGISSNFSLDFANGEFSGPELKKIM 46
            DSFMG L  FGDES K+        P  +++   VDG S+ FSL+F NGEFSG ELKKIM
Sbjct: 351  DSFMGKL-QFGDESPKMPPTPPGVRPGQLSSNNLVDGNSAPFSLEFGNGEFSGAELKKIM 409

Query: 45   ANEKLAEIASADPKR 1
            AN+KLAEIA  DPKR
Sbjct: 410  ANDKLAEIALTDPKR 424


>ref|XP_004148549.1| PREDICTED: uncharacterized protein LOC101216189 [Cucumis sativus]
          Length = 571

 Score =  298 bits (762), Expect = 4e-78
 Identities = 199/428 (46%), Positives = 244/428 (57%), Gaps = 15/428 (3%)
 Frame = -1

Query: 1239 NGNEAMQRLQSSFGTTQQSSINR-FEMPQLNTSSLQGHG-NMRFFTPNFSPESSNSKRXX 1066
            N       LQ S+G +  S+ N  F M QL  S +       + F  NF  ++S      
Sbjct: 13   NTENMRNHLQCSYGVSSSSAGNLPFSMDQLKISQMNSSQIRPQHFHSNFLGDNSRRIGIP 72

Query: 1065 XXXXXXXXXXXXPFSQIPVSRISTQQPSLQNLSPGPTHSRSLSQPAIFSFDXXXXXXXXX 886
                        P+SQIP+SR   QQ    N +P PTHSRSLSQP+ FS D         
Sbjct: 73   PSPNSPQIPPISPYSQIPISRPMNQQ----NYNPVPTHSRSLSQPSFFSLDSLPPLSPSP 128

Query: 885  XXSNYREC--TXXXXXXXXXXSMEDRDGGMHASQPFSSG-RANSARSGESSLPPRKGHRR 715
                +RE   T          SMEDRD   H+  P S   R NS++ G+S LPPRK HRR
Sbjct: 129  ----FRESPTTSNSDQVSADTSMEDRDNSSHSLLPPSPYMRVNSSKMGDS-LPPRKAHRR 183

Query: 714  SISDIPFGYATVXXXXXXXXXXXXQGNLNQSAFVRENLGNVNPV-QLVKREGEWDKNGGK 538
            S SDIPFG +++             G L +S   +EN G + P  Q VKRE   +K+   
Sbjct: 184  SNSDIPFGLSSMIQPSPLLPFNSS-GGLERSTSSKENAGLLKPSSQFVKREHSLEKSVDN 242

Query: 537  SAEGMDERKSEGDAIDDLFSAYLNLDNVELLNSPETKVKNFNDIRDDLDSRASGTKMSGG 358
            + EGM ERKS+GD++DDLFSAY+NLD+++L NS  T  KN ++ R+DLDSR SGTK +GG
Sbjct: 243  NLEGMGERKSDGDSVDDLFSAYMNLDHIDLFNSSGTNDKNGHENREDLDSRGSGTKTNGG 302

Query: 357  DSSDNETGSSANESGCSITQTNLCSSKNK-EAFKRSAGEDIAPANRHRRSVSMDSFMGNL 181
            +SSDNE  SS NESG S     L SS  K E  KR+AG DIAP  RH RSVSMDSFMG L
Sbjct: 303  ESSDNEAESSVNESGDSAQMPGLNSSAEKREGIKRTAGGDIAPTTRHYRSVSMDSFMGKL 362

Query: 180  PNFGDESLKL--------PASVANQTSVDGISSNFSLDFANGEFSGPELKKIMANEKLAE 25
              FGDES K+        P  +++   VDG S+ FSL+F NGEFSG ELKKIMAN+KLAE
Sbjct: 363  -QFGDESPKMPPTPPGVRPGQLSSNNLVDGNSAPFSLEFGNGEFSGAELKKIMANDKLAE 421

Query: 24   IASADPKR 1
            IA  DPKR
Sbjct: 422  IALTDPKR 429


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