BLASTX nr result

ID: Coptis23_contig00015256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015256
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282645.1| PREDICTED: B3 domain-containing protein Os06...    59   5e-07
emb|CBI19534.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_004152735.1| PREDICTED: B3 domain-containing protein At5g...    54   1e-05

>ref|XP_002282645.1| PREDICTED: B3 domain-containing protein Os06g0194400-like [Vitis
           vinifera]
          Length = 252

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/60 (46%), Positives = 47/60 (78%), Gaps = 3/60 (5%)
 Frame = +2

Query: 110 VVSVRIETSTREQAS--LNPDKVKSCA-EKAEKFKANLEPEFPSFVKAMLRSHVSGGYWL 280
           VVS RI +  R+ ++     ++ ++CA E+AE+ +A+LEP++PSF+K+ML+SHV+GG+WL
Sbjct: 85  VVSERIHSKGRDLSNRVYASEEARTCAMERAEELQASLEPQYPSFLKSMLQSHVTGGFWL 144


>emb|CBI19534.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/52 (50%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +2

Query: 128 ETSTREQASLNPDKVKSCA-EKAEKFKANLEPEFPSFVKAMLRSHVSGGYWL 280
           + S R  AS   ++ ++CA E+AE+ +A+LEP++PSF+K+ML+SHV+GG+WL
Sbjct: 80  DLSNRVYAS---EEARTCAMERAEELQASLEPQYPSFLKSMLQSHVTGGFWL 128


>ref|XP_004152735.1| PREDICTED: B3 domain-containing protein At5g42700-like [Cucumis
           sativus] gi|449495997|ref|XP_004160007.1| PREDICTED: B3
           domain-containing protein At5g42700-like [Cucumis
           sativus]
          Length = 229

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/62 (41%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
 Frame = +2

Query: 104 NKVVSVRIETSTREQAS---LNPDKVKSCAEKAEKFKANLEPEFPSFVKAMLRSHVSGGY 274
           N+VV  R  +  R+ ++    + +  K   E+AE+ ++ LEP +PSF+K+ML+SHVSGG+
Sbjct: 81  NRVVIPRRISKARDLSNRVYASDEARKEAFERAEQLQSGLEPNYPSFIKSMLQSHVSGGF 140

Query: 275 WL 280
           WL
Sbjct: 141 WL 142


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