BLASTX nr result

ID: Coptis23_contig00015244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015244
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852...   129   2e-28
ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852...   129   2e-28
emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]   129   2e-28
ref|XP_004139627.1| PREDICTED: uncharacterized protein LOC101222...   124   1e-26
ref|XP_002301791.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26

>ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852917 isoform 2 [Vitis
           vinifera] gi|359495533|ref|XP_003635013.1| PREDICTED:
           uncharacterized protein LOC100852917 isoform 3 [Vitis
           vinifera]
          Length = 335

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/102 (65%), Positives = 69/102 (67%)
 Frame = -2

Query: 387 APPRVSLMALLEETDWSTGGIVGTTXXXXXXXXXXXXXXXXXXXXXXGRGEYVCCVCMVR 208
           A PR+SLMALLEETD    GIVG                           EY CCVCMVR
Sbjct: 239 AAPRMSLMALLEETD-RQAGIVGPAYVLEEEEDEDEEEEAGSGGGI----EYNCCVCMVR 293

Query: 207 HKGAAFIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 82
           HKGAAFIPCGHTFCRLCSRELWV+RGNCPLCNGFILEILDIF
Sbjct: 294 HKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 335


>ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852917 isoform 1 [Vitis
           vinifera]
          Length = 329

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/102 (65%), Positives = 69/102 (67%)
 Frame = -2

Query: 387 APPRVSLMALLEETDWSTGGIVGTTXXXXXXXXXXXXXXXXXXXXXXGRGEYVCCVCMVR 208
           A PR+SLMALLEETD    GIVG                           EY CCVCMVR
Sbjct: 233 AAPRMSLMALLEETD-RQAGIVGPAYVLEEEEDEDEEEEAGSGGGI----EYNCCVCMVR 287

Query: 207 HKGAAFIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 82
           HKGAAFIPCGHTFCRLCSRELWV+RGNCPLCNGFILEILDIF
Sbjct: 288 HKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 329


>emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]
          Length = 326

 Score =  129 bits (325), Expect = 2e-28
 Identities = 67/102 (65%), Positives = 69/102 (67%)
 Frame = -2

Query: 387 APPRVSLMALLEETDWSTGGIVGTTXXXXXXXXXXXXXXXXXXXXXXGRGEYVCCVCMVR 208
           A PR+SLMALLEETD    GIVG                           EY CCVCMVR
Sbjct: 230 AAPRMSLMALLEETD-RQAGIVGPAYVLEEEEDEDEEEEGDSGGGI----EYNCCVCMVR 284

Query: 207 HKGAAFIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 82
           HKGAAFIPCGHTFCRLCSRELWV+RGNCPLCNGFILEILDIF
Sbjct: 285 HKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 326


>ref|XP_004139627.1| PREDICTED: uncharacterized protein LOC101222466 [Cucumis sativus]
           gi|449475393|ref|XP_004154438.1| PREDICTED:
           uncharacterized LOC101222466 [Cucumis sativus]
          Length = 342

 Score =  124 bits (310), Expect = 1e-26
 Identities = 68/111 (61%), Positives = 71/111 (63%), Gaps = 4/111 (3%)
 Frame = -2

Query: 402 AEVVVAPPRVSLMALLEETDWSTGGIVGTTXXXXXXXXXXXXXXXXXXXXXXGRG----E 235
           AE   AP R+SLM LLEETD   G   G+T                      G G    E
Sbjct: 233 AESTPAPVRMSLMDLLEETDRQMG-FEGSTYRIEDEDEEEEIENEVSTTVCGGGGSGGTE 291

Query: 234 YVCCVCMVRHKGAAFIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 82
             CCVCMVRHKGAAFIPCGHTFCRLCSRELWV+RGNCPLCNGFILEILDIF
Sbjct: 292 PHCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 342


>ref|XP_002301791.1| predicted protein [Populus trichocarpa] gi|222843517|gb|EEE81064.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  122 bits (307), Expect = 2e-26
 Identities = 65/107 (60%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
 Frame = -2

Query: 384 PPRVSLMALLEETDWSTGG-----IVGTTXXXXXXXXXXXXXXXXXXXXXXGRG-EYVCC 223
           P R+SLM LLEETD   G       VG                          G EY CC
Sbjct: 290 PVRMSLMDLLEETDRQMGFEGSRYTVGDLEACDDDDDEDEEEEDGGEEGDGVAGIEYTCC 349

Query: 222 VCMVRHKGAAFIPCGHTFCRLCSRELWVNRGNCPLCNGFILEILDIF 82
           VCMVRHKGAAFIPCGHTFCRLCSRELWV RGNCPLCNGFILEILDIF
Sbjct: 350 VCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 396


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