BLASTX nr result

ID: Coptis23_contig00015234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015234
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532127.1| leucine-rich repeat containing protein, puta...    86   3e-15
gb|AAB96979.1| NBS-LRR type resistance protein [Hordeum vulgare ...    86   4e-15
ref|XP_002525457.1| leucine-rich repeat containing protein, puta...    85   5e-15
gb|AFW78493.1| disease resistance analog PIC16, partial [Zea mays]     85   7e-15
ref|XP_003613508.1| Resistance protein [Medicago truncatula] gi|...    84   9e-15

>ref|XP_002532127.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223528186|gb|EEF30247.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1142

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 36/57 (63%), Positives = 47/57 (82%)
 Frame = +1

Query: 13  ETEDLSICPILGIGGLGKTTFAQLVYNDERVKEHFEVRAWVCVSEDFDAKELTKAVI 183
           + +D+S+ PI+G+GGLGKTT AQLVYNDERVK HF++R WVCVS +FD + L K +I
Sbjct: 162 DADDVSVYPIIGMGGLGKTTLAQLVYNDERVKRHFDLRIWVCVSGEFDVRRLVKTII 218


>gb|AAB96979.1| NBS-LRR type resistance protein [Hordeum vulgare subsp. vulgare]
          Length = 255

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 38/61 (62%), Positives = 47/61 (77%)
 Frame = +1

Query: 1   QGNVETEDLSICPILGIGGLGKTTFAQLVYNDERVKEHFEVRAWVCVSEDFDAKELTKAV 180
           Q N    +LSI PI+G+GGLGKTT  QLVYND R+KEHF++R W+CVSE+FD  +LTK  
Sbjct: 60  QNNSNQSNLSILPIVGMGGLGKTTLTQLVYNDTRIKEHFQLRVWLCVSENFDQMKLTKET 119

Query: 181 I 183
           I
Sbjct: 120 I 120


>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223535270|gb|EEF36947.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1177

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/55 (67%), Positives = 47/55 (85%)
 Frame = +1

Query: 19  EDLSICPILGIGGLGKTTFAQLVYNDERVKEHFEVRAWVCVSEDFDAKELTKAVI 183
           EDLSI PI+G+GG+GKTT AQL +ND +VKE F++R W+CVSEDFD + LTKA+I
Sbjct: 190 EDLSIIPIVGMGGMGKTTLAQLAFNDVKVKEFFKLRMWICVSEDFDVQRLTKAII 244


>gb|AFW78493.1| disease resistance analog PIC16, partial [Zea mays]
          Length = 516

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 37/54 (68%), Positives = 46/54 (85%)
 Frame = +1

Query: 22  DLSICPILGIGGLGKTTFAQLVYNDERVKEHFEVRAWVCVSEDFDAKELTKAVI 183
           +LSI PI+G+GGLGKTT  QL+YNDERVKEHF++R W+CVSE+FD  +LTK  I
Sbjct: 198 NLSIIPIVGMGGLGKTTLTQLIYNDERVKEHFQLRVWLCVSENFDEMKLTKETI 251


>ref|XP_003613508.1| Resistance protein [Medicago truncatula]
           gi|355514843|gb|AES96466.1| Resistance protein [Medicago
           truncatula]
          Length = 1125

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 36/57 (63%), Positives = 47/57 (82%)
 Frame = +1

Query: 13  ETEDLSICPILGIGGLGKTTFAQLVYNDERVKEHFEVRAWVCVSEDFDAKELTKAVI 183
           E EDLS+ PI+G+GGLGKTT AQLV+N +++  HFE++ WVCVSEDF  K +TKA+I
Sbjct: 191 EQEDLSVYPIVGLGGLGKTTLAQLVFNHDKIVNHFELKIWVCVSEDFTLKRMTKAII 247


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