BLASTX nr result

ID: Coptis23_contig00015231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015231
         (1369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|2...   585   e-165
ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins f...   576   e-162
ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins f...   576   e-162
emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]   575   e-161
ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins f...   563   e-158

>ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|222853008|gb|EEE90555.1|
            predicted protein [Populus trichocarpa]
          Length = 342

 Score =  585 bits (1508), Expect = e-165
 Identities = 263/339 (77%), Positives = 300/339 (88%)
 Frame = +2

Query: 2    FWVLLFVVLSCLFGTLNASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGP 181
            +WV  F+V SCL GTL+ASAGDSDP Y+ C+ QC+++GCV  +CF HC FSSDG S+DGP
Sbjct: 5    YWVGFFLVFSCLGGTLDASAGDSDPIYRTCVGQCEKSGCVGQRCFSHCNFSSDGVSIDGP 64

Query: 182  WYMQEPMYLQWKQWDCQSDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSV 361
            WY QEP+YLQWKQWDCQSDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEPVSV
Sbjct: 65   WYKQEPLYLQWKQWDCQSDCRYYCMLDREKEREALGHGPVKYHGKWPFKRVYGIQEPVSV 124

Query: 362  AFSALNLAMQFHGWLSLFIHLYYKLPLSPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFH 541
            AFSALNLAM FHGWLS FI LYYKLPL  Q++K YYEY+ LW IYG  ++NSWFWSAVFH
Sbjct: 125  AFSALNLAMHFHGWLSFFILLYYKLPLK-QDKKAYYEYASLWHIYGFLSLNSWFWSAVFH 183

Query: 542  SRDVDLTEKLDYSSAVALLGYSLIVAILRTFNVRGEATRVMVAAPILAFVTTHILYLNFF 721
            SRDVDLTEKLDYSSAVA LGYSLI++ILR+FNVR EA RVMVAAP+LAF+TTHIL++NF+
Sbjct: 184  SRDVDLTEKLDYSSAVAFLGYSLIMSILRSFNVRDEAARVMVAAPLLAFLTTHILFINFY 243

Query: 722  KLDYGLNMKVCVAMGITQLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQG 901
            KLDYG NM+VCV M + QLLLWA+WAGV+ HPS+WKLW VV+G  LAMLLEIYDFPPY+G
Sbjct: 244  KLDYGWNMQVCVVMAVAQLLLWAIWAGVTGHPSRWKLWVVVIGGGLAMLLEIYDFPPYEG 303

Query: 902  YVDAHALWHATTIPLTYLWWSFIKDDAEFRTSDSLKKVK 1018
            YVDAHALWHATTIPLTY+WWSFI+DDAEFRTS+ LKK K
Sbjct: 304  YVDAHALWHATTIPLTYIWWSFIRDDAEFRTSNLLKKTK 342


>ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 2 [Vitis
            vinifera]
          Length = 342

 Score =  576 bits (1485), Expect = e-162
 Identities = 260/339 (76%), Positives = 296/339 (87%)
 Frame = +2

Query: 2    FWVLLFVVLSCLFGTLNASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGP 181
            +W+  F V   L     AS GD+DP Y+ C+EQC++TGCV ++CF HC+F SDG  VDGP
Sbjct: 5    YWIAFFAVFVYLVRVFEASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGP 64

Query: 182  WYMQEPMYLQWKQWDCQSDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSV 361
            WY+QEP+YL+WKQWDCQSDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEP SV
Sbjct: 65   WYLQEPLYLRWKQWDCQSDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASV 124

Query: 362  AFSALNLAMQFHGWLSLFIHLYYKLPLSPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFH 541
            A SALNLAMQFHGWLS FI L YKLPL P N+K YYEY+ LW IYGL +MNSWFWSAVFH
Sbjct: 125  ALSALNLAMQFHGWLSFFILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFH 183

Query: 542  SRDVDLTEKLDYSSAVALLGYSLIVAILRTFNVRGEATRVMVAAPILAFVTTHILYLNFF 721
            SRDVDLTEKLDYSSAVALLG+SLI+AILR+FNVR EA RVMV+AP+LAFVTTHILYLNF+
Sbjct: 184  SRDVDLTEKLDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFY 243

Query: 722  KLDYGLNMKVCVAMGITQLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQG 901
            K DYG NMKVCV MG+ QLL+WA+WAGV+RHPS+WKLW VVVG  LAMLLEIYDFPPY+G
Sbjct: 244  KFDYGWNMKVCVVMGVAQLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEG 303

Query: 902  YVDAHALWHATTIPLTYLWWSFIKDDAEFRTSDSLKKVK 1018
            +VDAHALWHATTIPLTY+WWSFIKDDAEF+T++ LKKVK
Sbjct: 304  FVDAHALWHATTIPLTYIWWSFIKDDAEFQTANLLKKVK 342


>ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 1 [Vitis
            vinifera] gi|296082755|emb|CBI21760.3| unnamed protein
            product [Vitis vinifera]
          Length = 379

 Score =  576 bits (1485), Expect = e-162
 Identities = 260/339 (76%), Positives = 296/339 (87%)
 Frame = +2

Query: 2    FWVLLFVVLSCLFGTLNASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGP 181
            +W+  F V   L     AS GD+DP Y+ C+EQC++TGCV ++CF HC+F SDG  VDGP
Sbjct: 42   YWIAFFAVFVYLVRVFEASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGP 101

Query: 182  WYMQEPMYLQWKQWDCQSDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSV 361
            WY+QEP+YL+WKQWDCQSDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEP SV
Sbjct: 102  WYLQEPLYLRWKQWDCQSDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASV 161

Query: 362  AFSALNLAMQFHGWLSLFIHLYYKLPLSPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFH 541
            A SALNLAMQFHGWLS FI L YKLPL P N+K YYEY+ LW IYGL +MNSWFWSAVFH
Sbjct: 162  ALSALNLAMQFHGWLSFFILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFH 220

Query: 542  SRDVDLTEKLDYSSAVALLGYSLIVAILRTFNVRGEATRVMVAAPILAFVTTHILYLNFF 721
            SRDVDLTEKLDYSSAVALLG+SLI+AILR+FNVR EA RVMV+AP+LAFVTTHILYLNF+
Sbjct: 221  SRDVDLTEKLDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFY 280

Query: 722  KLDYGLNMKVCVAMGITQLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQG 901
            K DYG NMKVCV MG+ QLL+WA+WAGV+RHPS+WKLW VVVG  LAMLLEIYDFPPY+G
Sbjct: 281  KFDYGWNMKVCVVMGVAQLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEG 340

Query: 902  YVDAHALWHATTIPLTYLWWSFIKDDAEFRTSDSLKKVK 1018
            +VDAHALWHATTIPLTY+WWSFIKDDAEF+T++ LKKVK
Sbjct: 341  FVDAHALWHATTIPLTYIWWSFIKDDAEFQTANLLKKVK 379


>emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]
          Length = 342

 Score =  575 bits (1481), Expect = e-161
 Identities = 259/339 (76%), Positives = 295/339 (87%)
 Frame = +2

Query: 2    FWVLLFVVLSCLFGTLNASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGP 181
            +W+  F V   L     AS GD+DP Y+ C+EQC++TGCV ++CF HC+F SDG  VDGP
Sbjct: 5    YWIAFFAVFVYLVRVFEASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGP 64

Query: 182  WYMQEPMYLQWKQWDCQSDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSV 361
            WY+QEP+YL+WKQWDCQSDCRY+CMLD EKE+E LG GPVKYHGKWPFKRV+GIQEP SV
Sbjct: 65   WYLQEPLYLRWKQWDCQSDCRYYCMLDREKEREALGNGPVKYHGKWPFKRVYGIQEPASV 124

Query: 362  AFSALNLAMQFHGWLSLFIHLYYKLPLSPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFH 541
            A SALNLAMQFHGWLS FI L YKLPL P N+K YYEY+ LW IYGL +MNSWFWSAVFH
Sbjct: 125  ALSALNLAMQFHGWLSFFILLNYKLPLKP-NKKAYYEYTCLWHIYGLLSMNSWFWSAVFH 183

Query: 542  SRDVDLTEKLDYSSAVALLGYSLIVAILRTFNVRGEATRVMVAAPILAFVTTHILYLNFF 721
            SRDVDLTEKLDYSSAVALLG+SLI+AILR+FNVR EA RVMV+AP+LAFVTTHILYLNF+
Sbjct: 184  SRDVDLTEKLDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFY 243

Query: 722  KLDYGLNMKVCVAMGITQLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQG 901
            K DYG NMKVCV MG+ QLL+W +WAGV+RHPS+WKLW VVVG  LAMLLEIYDFPPY+G
Sbjct: 244  KFDYGWNMKVCVVMGVAQLLIWTIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEG 303

Query: 902  YVDAHALWHATTIPLTYLWWSFIKDDAEFRTSDSLKKVK 1018
            +VDAHALWHATTIPLTY+WWSFIKDDAEF+T++ LKKVK
Sbjct: 304  FVDAHALWHATTIPLTYIWWSFIKDDAEFQTANLLKKVK 342


>ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins factor 3 [Vitis vinifera]
            gi|147785290|emb|CAN61923.1| hypothetical protein
            VITISV_036651 [Vitis vinifera]
            gi|297741118|emb|CBI31849.3| unnamed protein product
            [Vitis vinifera]
          Length = 342

 Score =  563 bits (1450), Expect = e-158
 Identities = 251/338 (74%), Positives = 292/338 (86%)
 Frame = +2

Query: 5    WVLLFVVLSCLFGTLNASAGDSDPRYQVCLEQCKETGCVKDKCFQHCRFSSDGDSVDGPW 184
            W+ L   LS L   LNASAGDSDP Y+ C+EQC++TGCV DKCFQHC+ SSDG+ + GPW
Sbjct: 6    WIALSFALSFLVRVLNASAGDSDPLYKACIEQCEKTGCVGDKCFQHCKLSSDGNPIGGPW 65

Query: 185  YMQEPMYLQWKQWDCQSDCRYHCMLDTEKEKEVLGTGPVKYHGKWPFKRVFGIQEPVSVA 364
            Y+QEP+YL+WKQWDC+SDCRYHCML  E+E+E LG  PVKYHGKWPF+RV+GIQEPVSVA
Sbjct: 66   YLQEPLYLRWKQWDCRSDCRYHCMLAREEEREELGDKPVKYHGKWPFRRVYGIQEPVSVA 125

Query: 365  FSALNLAMQFHGWLSLFIHLYYKLPLSPQNRKPYYEYSGLWFIYGLFAMNSWFWSAVFHS 544
             + LNLAMQFHGW+S  I LYYKLPL P ++K +YEY+GLW IYG+ AMN+WFW+AVFHS
Sbjct: 126  LATLNLAMQFHGWVSFLILLYYKLPLRP-DKKTFYEYTGLWHIYGILAMNAWFWNAVFHS 184

Query: 545  RDVDLTEKLDYSSAVALLGYSLIVAILRTFNVRGEATRVMVAAPILAFVTTHILYLNFFK 724
            RDVDLTEKLDYSS VALLG++LI+AILR FNVR EA RVM+AAP++AFVTTHILYLNF+K
Sbjct: 185  RDVDLTEKLDYSSGVALLGFTLILAILRAFNVRDEAARVMIAAPLMAFVTTHILYLNFYK 244

Query: 725  LDYGLNMKVCVAMGITQLLLWAVWAGVSRHPSKWKLWAVVVGTSLAMLLEIYDFPPYQGY 904
            LDYGLNMKVC+ MGI QLLLW VWAGV+ HPS+WKLW VVVG +LAM LEIYDFPPY G+
Sbjct: 245  LDYGLNMKVCLTMGIAQLLLWTVWAGVTHHPSRWKLWVVVVGGALAMFLEIYDFPPYWGF 304

Query: 905  VDAHALWHATTIPLTYLWWSFIKDDAEFRTSDSLKKVK 1018
            VDAHA+WHA  IP TYLWWSF+KDD+EFRTS  +KKVK
Sbjct: 305  VDAHAVWHALAIPFTYLWWSFVKDDSEFRTSALMKKVK 342


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