BLASTX nr result

ID: Coptis23_contig00015230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015230
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271985.2| PREDICTED: uncharacterized protein LOC100243...    66   3e-09
ref|XP_002518400.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
ref|XP_002335870.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003610505.1| hypothetical protein MTR_4g132940 [Medicago ...    57   1e-06
ref|XP_003547277.1| PREDICTED: uncharacterized protein LOC100807...    56   3e-06

>ref|XP_002271985.2| PREDICTED: uncharacterized protein LOC100243092 [Vitis vinifera]
          Length = 301

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
 Frame = +2

Query: 95  MGIGFKRVTTTFDETARARLCQXXXXXXXXXXXXXXXXDLINSFIEKDE-RMFLEEEIID 271
           M + FKRV+  FD+ ARARLC                 DL++SF+E+D   + + +E   
Sbjct: 1   MAMRFKRVSAAFDDVARARLCDSSGSDHSEEDDSEELSDLVDSFLERDVIELQVGDEDGK 60

Query: 272 MEKDGSDSETISYSCSSAGAETSKEWMNLLLLG----NSHDGDVRMRIRSETELALKDIA 439
           ME++ SD ++ +    S     ++E +  L+ G    +  D DV+ +IR E E+  + + 
Sbjct: 61  MEEERSDFDSENRWSDS----LTREMLQSLISGDDGNDDGDDDVKRKIRDELEVKCRSLE 116

Query: 440 AARMMSFSDQGVNINKRHLMSRLRERGFDAG 532
             +   F        KR LM+ LR RGFDAG
Sbjct: 117 NCQAEGF--------KRRLMTLLRRRGFDAG 139


>ref|XP_002518400.1| conserved hypothetical protein [Ricinus communis]
           gi|223542245|gb|EEF43787.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 306

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 56/156 (35%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
 Frame = +2

Query: 86  VSKMGIGFKRVTTT-FDETARARLCQXXXXXXXXXXXXXXXXDLINSFIEKDER---MFL 253
           ++K+ + FK++    F+E AR RLC+                 L+NSFIE+D+    +F+
Sbjct: 1   MTKLPVKFKKMAAAMFNEAARLRLCERSGSEHCSPDHDLS--QLVNSFIERDDHPTILFM 58

Query: 254 EEEI-IDMEKDGSDSETISYSCSSAGAETSKEWMNLL--LLGNSHDGDVRMRIRSETELA 424
           E +I I+   D  + E   YS S A      E  N+L  LL    D DVR +IRSETE+A
Sbjct: 59  ESDIKINHPPDDDNQE--HYSVSDA------ENKNILESLLNKEDDDDVRKKIRSETEIA 110

Query: 425 LKDIAAARMMSFSDQGVNINKRHLMSRLRERGFDAG 532
              I       F         R LMS LR  GFDAG
Sbjct: 111 CGIIGERSSHGF--------HRSLMSHLRHLGFDAG 138


>ref|XP_002335870.1| predicted protein [Populus trichocarpa] gi|222835928|gb|EEE74349.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 54/146 (36%), Positives = 67/146 (45%), Gaps = 2/146 (1%)
 Frame = +2

Query: 101 IGFKRVTTTFDETARA-RLCQXXXXXXXXXXXXXXXX-DLINSFIEKDERMFLEEEIIDM 274
           + FKRV   F+E +RA RLC+                 DL+NSFIE+D         ID 
Sbjct: 7   VRFKRVAAAFNEASRAIRLCESSGSEHYSPDNNSADLSDLVNSFIERD---------IDQ 57

Query: 275 EKDGSDSETISYSCSSAGAETSKEWMNLLLLGNSHDGDVRMRIRSETELALKDIAAARMM 454
             +  D    SYS        +K+ +  LL     D DVR +IR ETELA   I     +
Sbjct: 58  HDESLD--ICSYS-------ETKDTLENLLNSIEDDDDVRQKIRKETELACGIIGERSSL 108

Query: 455 SFSDQGVNINKRHLMSRLRERGFDAG 532
           S         KR LMS LR+RGFDAG
Sbjct: 109 SSHLDF----KRGLMSHLRDRGFDAG 130


>ref|XP_003610505.1| hypothetical protein MTR_4g132940 [Medicago truncatula]
           gi|355511560|gb|AES92702.1| hypothetical protein
           MTR_4g132940 [Medicago truncatula]
          Length = 287

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 49/146 (33%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
 Frame = +2

Query: 101 IGFKRVTTTF--DETARARLCQXXXXXXXXXXXXXXXXDLINSFIEKDERMFLEEEIIDM 274
           + F+RV   F  DE AR RLC+                DL+ SF+EK+  +  EE+ +  
Sbjct: 10  VRFERVAAAFESDEVARVRLCESSGSEHSPESSTDLS-DLVKSFLEKNS-VRAEEDAVAF 67

Query: 275 EKDGSDSETISYSCSSAGAETSKEWMNLLLLGNSHDGDVRMRIRSETELALKDIAAARMM 454
           +K+  D E   Y       E  +E     +L    +  V+ +IR E ELA++ +   +  
Sbjct: 68  DKEDRDFEWYDY-------EEKRE-----ILKEIFNDTVKEKIRREAELAIEVVGGDK-- 113

Query: 455 SFSDQGVNINKRHLMSRLRERGFDAG 532
             S  G    KR +MSRLRERGFDAG
Sbjct: 114 --SSPGF---KRMVMSRLRERGFDAG 134


>ref|XP_003547277.1| PREDICTED: uncharacterized protein LOC100807096 [Glycine max]
          Length = 312

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
 Frame = +2

Query: 86  VSKMGIGFKRVTTTFD-ETARARLCQXXXXXXXXXXXXXXXXDLINSFIEKDERMF--LE 256
           ++++ + F+RV   FD + AR  LC+                DL+ SF+EK+E      E
Sbjct: 1   MARIPVRFQRVAAAFDADVARVGLCESSGSEHSPESLTDLS-DLVKSFMEKNEATTGEKE 59

Query: 257 EEIIDMEKDGSDSETISYSCSSAGAETSKEWMNLLLLGNSHDGDVR---MRIRSETELAL 427
           EE +   ++G D E   +  +       +E +  LL  N  D D R    +IR E E+A 
Sbjct: 60  EEEVGDVREGHDEE--EFEKTEWSYSEKREMLRSLLYENDDDEDERDDKEKIRREAEVAF 117

Query: 428 KDIAAARMMSFSDQGVNINKRHLMSRLRERGFDAG 532
             +             N +KR LMS LRE+GFDAG
Sbjct: 118 GVVVG-----------NYSKRRLMSLLREKGFDAG 141


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