BLASTX nr result

ID: Coptis23_contig00015224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015224
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282199.2| PREDICTED: cyclin-dependent kinase inhibitor...   100   3e-19
emb|CBI21439.3| unnamed protein product [Vitis vinifera]               91   4e-16
ref|NP_001238139.1| cyclin-dependent kinase inhibitor 1;2 [Glyci...    90   8e-16
dbj|BAB20860.1| cyclin dependent kinase inhibitor [Pisum sativum]      88   2e-15
ref|NP_001237200.1| cyclin-dependent kinase inhibitor 1;1 [Glyci...    85   2e-14

>ref|XP_002282199.2| PREDICTED: cyclin-dependent kinase inhibitor 1-like [Vitis
           vinifera]
          Length = 227

 Score =  100 bits (250), Expect = 3e-19
 Identities = 79/216 (36%), Positives = 107/216 (49%), Gaps = 34/216 (15%)
 Frame = +2

Query: 74  GEVVVMESFSHMGMRTRAKTLAAMSETASXXXXXXXXXXXXXXRKVGSSEKLQLTSYRR- 250
           GEV VME     G++TRA+ LA  +   S               K  SS + QL + R  
Sbjct: 12  GEVAVMEVAQVAGVKTRARALAMAAAADSSGTVKRRKVSGGGELKFASSYE-QLKNRRGL 70

Query: 251 ----RRRVSPASSENSFAV----------------SRCXXXXXXXXXXXXXXXFLDLENE 370
                  VS A S NS  V                + C               F DLE E
Sbjct: 71  VISPENSVSEAPSGNSGRVVAEEDQCSSPSSDHVSASCCSSNGSSELVKERLKFADLEEE 130

Query: 371 T----STCFLDCTQR---TPSSSLRQESME-----RPTSVS-RHRSMSEMKTPSEAEIDE 511
           +    ++ + DC +R   TPSS LR ES +     RP+  + RHRS  E K PSE+E++E
Sbjct: 131 SVEIETSAYSDCRERRETTPSSELRAESDDLESTARPSEANYRHRSTVE-KMPSESELEE 189

Query: 512 FFSTAEKDEQRRFTDKFNFDIRKELPLKGRYEWVRL 619
           FF+ AEKD Q+RF++K+N+DI K++P++GRYEWVRL
Sbjct: 190 FFAAAEKDVQKRFSEKYNYDIVKDVPMEGRYEWVRL 225


>emb|CBI21439.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 51/104 (49%), Positives = 72/104 (69%), Gaps = 14/104 (13%)
 Frame = +2

Query: 350 FLDLENET----STCFLDCTQR----TPSSSLRQESME-----RPTSVS-RHRSMSEMKT 487
           F DLE E+    ++ + DC +     TPSS LR ES +     RP+  + RHRS  E K 
Sbjct: 108 FADLEEESVEIETSAYSDCRESRRETTPSSELRAESDDLESTARPSEANYRHRSTVE-KM 166

Query: 488 PSEAEIDEFFSTAEKDEQRRFTDKFNFDIRKELPLKGRYEWVRL 619
           PSE+E++EFF+ AEKD Q+RF++K+N+DI K++P++GRYEWVRL
Sbjct: 167 PSESELEEFFAAAEKDVQKRFSEKYNYDIVKDVPMEGRYEWVRL 210


>ref|NP_001238139.1| cyclin-dependent kinase inhibitor 1;2 [Glycine max]
           gi|46844158|gb|AAS13375.1| cyclin-dependent kinase
           inhibitor 1;2 [Glycine max]
          Length = 198

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 69/197 (35%), Positives = 95/197 (48%), Gaps = 24/197 (12%)
 Frame = +2

Query: 101 SHMGMRTRAKTLAAM-SETASXXXXXXXXXXXXXXRKVGSSEKLQLTSYR---------- 247
           + +G+RTRA+   AM + TAS                V    K   TS            
Sbjct: 3   AQVGVRTRARAALAMEAATASSAQPSSKRKKIYDTNHVAKLSKTPRTSSSSFFIPATVTE 62

Query: 248 --RRRRVSPASSENSFAVSRCXXXXXXXXXXXXXXXFLDLENE-----TSTCF----LDC 394
             + R +SP SSE     + C                LDLE E     TSTC     ++ 
Sbjct: 63  IVQERCLSPTSSE---IPASCCSSNGSIGLDEDRIKLLDLEVESAQVETSTCNGGQEIER 119

Query: 395 TQRTPSSSLRQESME-RPTSVSRHRSMSEMKT-PSEAEIDEFFSTAEKDEQRRFTDKFNF 568
            +   SS LR+ S E  P  ++ HR++S+ K  P+E E +EFF  AEKD Q+RF DK+N+
Sbjct: 120 REMKSSSELRENSQEPEPMEINSHRALSKAKAMPTELEXEEFFVAAEKDIQKRFQDKYNY 179

Query: 569 DIRKELPLKGRYEWVRL 619
           DI K++PL+GRYEWV+L
Sbjct: 180 DIVKDVPLEGRYEWVQL 196


>dbj|BAB20860.1| cyclin dependent kinase inhibitor [Pisum sativum]
          Length = 192

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 15/188 (7%)
 Frame = +2

Query: 101 SHMGMRTRAKTLAAMSETASXXXXXXXXXXXXXXRKVGSSEKLQLTSYR----RRRRVSP 268
           + +G+RTRA+   AM  T+S               +  S+ K ++ + R      +  S 
Sbjct: 4   AQVGVRTRARAALAMEATSSPPRTTKRRKINRTENRKFSTVKPKIATVRPETVTEKHSSG 63

Query: 269 ASSENSFAVSRCXXXXXXXXXXXXXXXFLDLE-----NETSTCFLD----CTQRTPSSSL 421
           ++S+  F  S C                LDLE      ETSTC  D      + + SS  
Sbjct: 64  STSDEEFPAS-CCSSNGSVELDEERIKSLDLEVESAQGETSTCNCDEEIERREMSRSSEF 122

Query: 422 RQES--MERPTSVSRHRSMSEMKTPSEAEIDEFFSTAEKDEQRRFTDKFNFDIRKELPLK 595
           R  S  +E   + SR    S  KTP+E E++EFF+ AEKD Q++F +K+N+DI K++PL+
Sbjct: 123 RGNSHELESMETNSRRPISSPKKTPTEYELEEFFAAAEKDIQKKFQEKYNYDILKDVPLE 182

Query: 596 GRYEWVRL 619
           GRYEWV+L
Sbjct: 183 GRYEWVQL 190


>ref|NP_001237200.1| cyclin-dependent kinase inhibitor 1;1 [Glycine max]
           gi|42362358|gb|AAS13374.1| cyclin-dependent kinase
           inhibitor 1;1 [Glycine max]
          Length = 205

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 11/135 (8%)
 Frame = +2

Query: 248 RRRRVSPASSENSFAVSRCXXXXXXXXXXXXXXXFLDLENE-----TSTCF----LDCTQ 400
           ++R +SP SSE     + C                LDLE E     TSTC     ++  +
Sbjct: 72  QQRCLSPTSSE---IPASCCSSNGSIGLDQDRIKLLDLEVESAQVETSTCNGGHEIERRE 128

Query: 401 RTPSSSLRQESME-RPTSVSRHRSMSEMKT-PSEAEIDEFFSTAEKDEQRRFTDKFNFDI 574
              SS LR+ S E  P  ++ HR +S+ K  P+E E++EFF+ +EKD Q+RF D++N+DI
Sbjct: 129 MKRSSELRENSQEPEPMEINSHRVLSKAKAMPTELELEEFFAASEKDIQKRFQDRYNYDI 188

Query: 575 RKELPLKGRYEWVRL 619
            K++PL+GRYEWV+L
Sbjct: 189 VKDVPLEGRYEWVQL 203


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