BLASTX nr result
ID: Coptis23_contig00015215
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00015215
(1287 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530558.1| conserved hypothetical protein [Ricinus comm... 170 6e-40
emb|CBI18517.3| unnamed protein product [Vitis vinifera] 166 9e-39
ref|XP_002306006.1| predicted protein [Populus trichocarpa] gi|2... 153 8e-35
ref|XP_002306005.1| predicted protein [Populus trichocarpa] gi|2... 153 8e-35
ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi... 142 1e-31
>ref|XP_002530558.1| conserved hypothetical protein [Ricinus communis]
gi|223529896|gb|EEF31826.1| conserved hypothetical
protein [Ricinus communis]
Length = 776
Score = 170 bits (431), Expect = 6e-40
Identities = 115/325 (35%), Positives = 167/325 (51%), Gaps = 23/325 (7%)
Frame = +2
Query: 44 SFETNCEPFAEYIAYIKENEQIHNKSVKADILSVLSYVVSQTLSSHVEGIAVCTIGVVNQ 223
S TN + A IAY+KEN ++S K +ILS+L+ ++ + S G +
Sbjct: 434 SCRTNSDLVASSIAYVKENICSFDESYKDEILSILNCIILGSSSDDTCNTLFLK-GETSF 492
Query: 224 DEAYHLASIMKLMSNSLLQVIQSMQSANLV-CEKTMKDHSLSTVYDVIFGICGSLLQCSN 400
+ Y LASI+KLMS+S+LQ IQ M+ + C+K+ D S S Y+ + I G Q S
Sbjct: 493 QDIYLLASILKLMSSSMLQAIQYMRFFGISGCQKSSTDFSSSKEYNYLVHILGCFQQFSI 552
Query: 401 INSHSTQKLLDEVMGSNPTSHKESKLMIMHIADLLIFCYDRGYGYLWKGCIVMMMSLMHL 580
Q L+E+M S+ HK+SK M++H++ LL Y G +L KGC+ MM L++L
Sbjct: 553 --HLPIQNFLNEMMQSHSARHKDSKWMLLHLSGLLSLSYASGIDFLVKGCLFTMMMLLNL 610
Query: 581 IMFEDGDLEALKAL--------FAHYPTKPSKALVVRSSTLKIAXXXXXXXXXXXXEDKD 736
+ E+GDL AL++L + P + +VVR ST I+
Sbjct: 611 FIIEEGDLSALRSLRGSRSKSYSSKSPDNVEEVMVVRKSTELISSKFQKIQDTYLRTRSH 670
Query: 737 IIG---SQDGQSETPH-----------VAMVGKEEDTCNGETYLNLVLTAGGNKRQSDLD 874
++ QD Q+ET V + E+ CNGE +L +L G N ++ D D
Sbjct: 671 VVSDKRKQDNQAETSEYSCVLNGLDSAVTVASNTEEICNGEMFLKCIL--GKNSKEPDFD 728
Query: 875 DLADFIECKPGKDYSKWLKDLDKHR 949
DLADF+ CKPGKDYS WLK +K R
Sbjct: 729 DLADFVACKPGKDYSDWLKGREKLR 753
>emb|CBI18517.3| unnamed protein product [Vitis vinifera]
Length = 707
Score = 166 bits (421), Expect = 9e-39
Identities = 120/363 (33%), Positives = 179/363 (49%), Gaps = 27/363 (7%)
Frame = +2
Query: 14 NSINHATNFGSFETNCEPFAEYIAYIKENEQIHNKSVKADILSVLSYVVSQTLSSHVEGI 193
NS N + T + + ++KEN+ I +KS + DI+ +LS+++ + LS
Sbjct: 348 NSWNSYLSNRFSRTKLDLVTSAVTFVKENQYILDKSCRDDIVLILSHMIPEALSGDDSDT 407
Query: 194 AVCTIGVVNQDEAYHLASIMKLMSNSLLQVIQSMQ-SANLVCEKTMKDHSLSTVYDVIFG 370
+ G + + Y LASI+KL+S+S+LQ I + S N C KT KD S Y+ I G
Sbjct: 408 ELHKEGDASLQDTYLLASILKLISSSMLQAIWCISHSGNPGCLKTFKDLSSCKEYEYILG 467
Query: 371 ICGSLLQCSNINSH-STQKLLDEVMGSNPTSHKESKLMIMHIADLLIFCYDRGYGYLWKG 547
I + N H K L VM + T HK+SK+M++H + +L G ++ KG
Sbjct: 468 IIANF---GRYNIHLPISKFLSHVM-DHSTRHKDSKMMLLHFSGMLSISLAIGVDFVVKG 523
Query: 548 CIVMMMSLMHLIMFEDGDLEALKALFAHYPTKPS---------KALVVRSSTLKIAXXXX 700
C + MM +++L +FE+G+L+AL+ L S + LV ++S+ +A
Sbjct: 524 CTLAMMIILNLFIFEEGNLDALRPLLVSKVESFSSGISSGNIQRVLVEQNSSQMVASKFQ 583
Query: 701 XXXXXXXXED---KDIIGSQDGQSETPHVA----------MVG---KEEDTCNGETYLNL 832
D G++DGQ E A +VG K E+TCNG+ +LN
Sbjct: 584 KVQTLYLSTDLLPSSCSGNKDGQEEMSGNANASILNNMDCVVGIEEKTEETCNGKIFLNC 643
Query: 833 VLTAGGNKRQSDLDDLADFIECKPGKDYSKWLKDLDKHRVWXXXXXXXXXXXXXXQTVKF 1012
+L G+K SDLDDLA FIECK GKDYS WL+D ++R W KF
Sbjct: 644 LLE--GSKEPSDLDDLAGFIECKEGKDYSNWLRDRKRYRKWKCAKMAVLRWEKKKTIWKF 701
Query: 1013 LKG 1021
+KG
Sbjct: 702 VKG 704
>ref|XP_002306006.1| predicted protein [Populus trichocarpa] gi|222848970|gb|EEE86517.1|
predicted protein [Populus trichocarpa]
Length = 751
Score = 153 bits (387), Expect = 8e-35
Identities = 108/338 (31%), Positives = 173/338 (51%), Gaps = 22/338 (6%)
Frame = +2
Query: 8 TYNSINHATNFGSFETNCEPFAEYIAYIKENEQIHNKSVKADILSVLSYVVSQTLSSHVE 187
+Y++ N + S TN E A IA++KE+ I ++S K +ILS+LS ++ + S+ +
Sbjct: 396 SYDAWNSYLSSMSSRTNSELVAASIAFMKESLCIVDESFKDEILSILSCIILRYPSNDIG 455
Query: 188 GIAVCTIGVVNQDEAYHLASIMKLMSNSLLQVIQSMQSA-NLVCEKTMKDHSLSTVYDVI 364
+ + + Y LASI+KLMS+SLLQ I ++ + VC K+++D S YDVI
Sbjct: 456 DTLLYKKEETSSQDIYLLASILKLMSSSLLQAIWYVKHLRSSVCLKSLEDVSSCKGYDVI 515
Query: 365 FGICGSLLQCSNINSHSTQKLLDEVMGSNPTSHKESKLMIMHIADLLIFCYDRGYGYLWK 544
I G S S QK L E + S+P HK+S+ M H + LL Y G +L K
Sbjct: 516 VDILGCFEHFSI--SLPIQKFLCETLQSHPARHKKSRWMFFHFSGLLSLSYASGLDFLVK 573
Query: 545 GCIVMMMSLMHLIMFEDGDLEALKAL-------FAHYPTKPSKALVVRSSTLKIAXXXXX 703
C+ +M ++++ + E+GDL A+ +L F+ + S+ ++ S + +I
Sbjct: 574 DCLFALMVVLNMFIIEEGDLAAVDSLFGSSLESFSSKSSDKSEGVMAISKSSQIVSSKIQ 633
Query: 704 XXXXXXXEDKDIIGSQDGQ--------------SETPHVAMVGKEEDTCNGETYLNLVLT 841
+ I S D + +E VA + ++TCNGE +L VL
Sbjct: 634 KIQEMYLRTRSTICSNDRKQHNQAGTSEYGSIMNELDSVASMEDAKETCNGEIFLKCVL- 692
Query: 842 AGGNKRQSDLDDLADFIECKPGKDYSKWLKDLDKHRVW 955
G + +DDL+DFIEC+ GK+YS WL+D + R+W
Sbjct: 693 -GKYAKSKVIDDLSDFIECEHGKNYSGWLRDRQRFRIW 729
>ref|XP_002306005.1| predicted protein [Populus trichocarpa] gi|222848969|gb|EEE86516.1|
predicted protein [Populus trichocarpa]
Length = 469
Score = 153 bits (387), Expect = 8e-35
Identities = 108/338 (31%), Positives = 173/338 (51%), Gaps = 22/338 (6%)
Frame = +2
Query: 8 TYNSINHATNFGSFETNCEPFAEYIAYIKENEQIHNKSVKADILSVLSYVVSQTLSSHVE 187
+Y++ N + S TN E A IA++KE+ I ++S K +ILS+LS ++ + S+ +
Sbjct: 49 SYDAWNSYLSSMSSRTNSELVAASIAFMKESLCIVDESFKDEILSILSCIILRYPSNDIG 108
Query: 188 GIAVCTIGVVNQDEAYHLASIMKLMSNSLLQVIQSMQSA-NLVCEKTMKDHSLSTVYDVI 364
+ + + Y LASI+KLMS+SLLQ I ++ + VC K+++D S YDVI
Sbjct: 109 DTLLYKKEETSSQDIYLLASILKLMSSSLLQAIWYVKHLRSSVCLKSLEDVSSCKGYDVI 168
Query: 365 FGICGSLLQCSNINSHSTQKLLDEVMGSNPTSHKESKLMIMHIADLLIFCYDRGYGYLWK 544
I G S S QK L E + S+P HK+S+ M H + LL Y G +L K
Sbjct: 169 VDILGCFEHFSI--SLPIQKFLCETLQSHPARHKKSRWMFFHFSGLLSLSYASGLDFLVK 226
Query: 545 GCIVMMMSLMHLIMFEDGDLEALKAL-------FAHYPTKPSKALVVRSSTLKIAXXXXX 703
C+ +M ++++ + E+GDL A+ +L F+ + S+ ++ S + +I
Sbjct: 227 DCLFALMVVLNMFIIEEGDLAAVDSLFGSSLESFSSKSSDKSEGVMAISKSSQIVSSKIQ 286
Query: 704 XXXXXXXEDKDIIGSQDGQ--------------SETPHVAMVGKEEDTCNGETYLNLVLT 841
+ I S D + +E VA + ++TCNGE +L VL
Sbjct: 287 KIQEMYLRTRSTICSNDRKQHNQAGTSEYGSIMNELDSVASMEDAKETCNGEIFLKCVL- 345
Query: 842 AGGNKRQSDLDDLADFIECKPGKDYSKWLKDLDKHRVW 955
G + +DDL+DFIEC+ GK+YS WL+D + R+W
Sbjct: 346 -GKYAKSKVIDDLSDFIECEHGKNYSGWLRDRQRFRIW 382
>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 142 bits (359), Expect = 1e-31
Identities = 106/330 (32%), Positives = 162/330 (49%), Gaps = 27/330 (8%)
Frame = +2
Query: 14 NSINHATNFGSFETNCEPFAEYIAYIKENEQIHNKSVKADILSVLSYVVSQTLSSHVEGI 193
NS N + T + + ++KEN+ I +KS + DI+ +LS+++ + LS
Sbjct: 425 NSWNSYLSNRFSRTKLDLVTSAVTFVKENQYILDKSCRDDIVLILSHMIPEALSGDDSDT 484
Query: 194 AVCTIGVVNQDEAYHLASIMKLMSNSLLQVIQSMQ-SANLVCEKTMKDHSLSTVYDVIFG 370
+ G + + Y LASI+KL+S+S+LQ I + S N C KT KD S Y+ I G
Sbjct: 485 ELHKEGDASLQDTYLLASILKLISSSMLQAIWCISHSGNPGCLKTFKDLSSCKEYEYILG 544
Query: 371 ICGSLLQCSNINSH-STQKLLDEVMGSNPTSHKESKLMIMHIADLLIFCYDRGYGYLWKG 547
I + N H K L VM + T HK+SK+M++H + +L G ++ KG
Sbjct: 545 IIANF---GRYNIHLPISKFLSHVM-DHSTRHKDSKMMLLHFSGMLSISLAIGVDFVVKG 600
Query: 548 CIVMMMSLMHLIMFEDGDLEALKALFAHYPTKPS---------KALVVRSSTLKIAXXXX 700
C + MM +++L +FE+G+L+AL+ L S + LV ++S+ +A
Sbjct: 601 CTLAMMIILNLFIFEEGNLDALRPLLVSKVESFSSGISSGNIQRVLVEQNSSQMVASKFQ 660
Query: 701 XXXXXXXXED---KDIIGSQDGQSETPH-------------VAMVGKEEDTCNGETYLNL 832
D G++DGQ E V + K E+TCNG+ +LN
Sbjct: 661 KVQTLYLSTDLLPSSCSGNKDGQEEMSGNANASILNNMDCVVGIEEKTEETCNGKIFLNC 720
Query: 833 VLTAGGNKRQSDLDDLADFIECKPGKDYSK 922
+L G+K SDLDDLA FIECK G Y +
Sbjct: 721 LLE--GSKEPSDLDDLAGFIECKEGVLYEE 748