BLASTX nr result

ID: Coptis23_contig00015207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015207
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37096.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002532368.1| kinesin light chain, putative [Ricinus commu...    67   2e-09
ref|XP_002263867.1| PREDICTED: nephrocystin-3 [Vitis vinifera]         67   2e-09
ref|XP_004161528.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin...    63   2e-08
ref|XP_004148956.1| PREDICTED: nephrocystin-3-like [Cucumis sati...    63   2e-08

>emb|CBI37096.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -2

Query: 376 ELNEPNKAAQMSAIAMEIMDVLVG*DNEDAMEECDNLSKCYGSIGS*ASAVEFLQRLLDV 197
           EL+ P  AAQM A+A +IMDV +G  + D++E C NLSK YG++GS   A+EF QR++D 
Sbjct: 401 ELDRPQSAAQMFAVAKDIMDVSLGPHHADSIEACQNLSKAYGAMGSYVLAIEFQQRVIDA 460

Query: 196 PSG-GP 182
             G GP
Sbjct: 461 WEGHGP 466


>ref|XP_002532368.1| kinesin light chain, putative [Ricinus communis]
           gi|223527924|gb|EEF30011.1| kinesin light chain,
           putative [Ricinus communis]
          Length = 618

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
 Frame = -2

Query: 376 ELNEPNKAAQMSAIAMEIMDVLVG*DNEDAMEECDNLSKCYGSIGS*ASAVEFLQRLLDV 197
           EL+ P  AAQM A+A +IMDV +G  + D++E C NLSK YG++GS A A+EF +R++D 
Sbjct: 507 ELDRPQSAAQMFAVAKDIMDVALGPHHADSIEACQNLSKAYGAMGSYALAIEFQKRVIDA 566

Query: 196 -PSGGP 182
             S GP
Sbjct: 567 WESHGP 572


>ref|XP_002263867.1| PREDICTED: nephrocystin-3 [Vitis vinifera]
          Length = 647

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -2

Query: 376 ELNEPNKAAQMSAIAMEIMDVLVG*DNEDAMEECDNLSKCYGSIGS*ASAVEFLQRLLDV 197
           EL+ P  AAQM A+A +IMDV +G  + D++E C NLSK YG++GS   A+EF QR++D 
Sbjct: 521 ELDRPQSAAQMFAVAKDIMDVSLGPHHADSIEACQNLSKAYGAMGSYVLAIEFQQRVIDA 580

Query: 196 PSG-GP 182
             G GP
Sbjct: 581 WEGHGP 586


>ref|XP_004161528.1| PREDICTED: LOW QUALITY PROTEIN: nephrocystin-3-like [Cucumis
           sativus]
          Length = 634

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/59 (50%), Positives = 43/59 (72%)
 Frame = -2

Query: 376 ELNEPNKAAQMSAIAMEIMDVLVG*DNEDAMEECDNLSKCYGSIGS*ASAVEFLQRLLD 200
           EL  P  AAQM A+A +IMDV +G  + D++E C NLSK YG++GS A A+EF ++++D
Sbjct: 513 ELERPQSAAQMFAVAKDIMDVSLGPHHADSIEACHNLSKAYGAMGSYALAIEFQEQVVD 571


>ref|XP_004148956.1| PREDICTED: nephrocystin-3-like [Cucumis sativus]
          Length = 634

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/59 (50%), Positives = 43/59 (72%)
 Frame = -2

Query: 376 ELNEPNKAAQMSAIAMEIMDVLVG*DNEDAMEECDNLSKCYGSIGS*ASAVEFLQRLLD 200
           EL  P  AAQM A+A +IMDV +G  + D++E C NLSK YG++GS A A+EF ++++D
Sbjct: 513 ELERPQSAAQMFAVAKDIMDVSLGPHHADSIEACHNLSKAYGAMGSYALAIEFQEQVVD 571


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