BLASTX nr result

ID: Coptis23_contig00015202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015202
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35190.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258...   100   2e-19
ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus c...    86   3e-15

>emb|CBI35190.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/123 (47%), Positives = 73/123 (59%)
 Frame = +2

Query: 8   DPLSHVGYSELKITSDSESEIPLSDDDDASTLGRETNNHKEEMLARFVQPVPRTIVSGTL 187
           DPLSH+GY+ELKITSDSESEI LSDDDDA+T+  ETN  KE++    + P PR I     
Sbjct: 34  DPLSHIGYTELKITSDSESEILLSDDDDANTIPCETNQPKEDVTVHSLLPEPRVITLA-- 91

Query: 188 LNASLEVLVPNKLIDQDSTPVPSLLVHHEQHDVGELYHMTSSASNMAVGHGLEELNWQQL 367
                + L   KLI       PS  +   + +  +L    S A   A+GHGLEEL+WQ+L
Sbjct: 92  -----DDLATEKLIIPAFVSEPSDAMPQVRSNAIKLNGTASEAPTAAIGHGLEELDWQKL 146

Query: 368 EQK 376
           E K
Sbjct: 147 EHK 149


>ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258654 [Vitis vinifera]
          Length = 877

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/123 (47%), Positives = 73/123 (59%)
 Frame = +2

Query: 8   DPLSHVGYSELKITSDSESEIPLSDDDDASTLGRETNNHKEEMLARFVQPVPRTIVSGTL 187
           DPLSH+GY+ELKITSDSESEI LSDDDDA+T+  ETN  KE++    + P PR I     
Sbjct: 222 DPLSHIGYTELKITSDSESEILLSDDDDANTIPCETNQPKEDVTVHSLLPEPRVITLA-- 279

Query: 188 LNASLEVLVPNKLIDQDSTPVPSLLVHHEQHDVGELYHMTSSASNMAVGHGLEELNWQQL 367
                + L   KLI       PS  +   + +  +L    S A   A+GHGLEEL+WQ+L
Sbjct: 280 -----DDLATEKLIIPAFVSEPSDAMPQVRSNAIKLNGTASEAPTAAIGHGLEELDWQKL 334

Query: 368 EQK 376
           E K
Sbjct: 335 EHK 337


>ref|XP_002319088.1| predicted protein [Populus trichocarpa] gi|222857464|gb|EEE95011.1|
           predicted protein [Populus trichocarpa]
          Length = 954

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/126 (42%), Positives = 75/126 (59%)
 Frame = +2

Query: 2   GFDPLSHVGYSELKITSDSESEIPLSDDDDASTLGRETNNHKEEMLARFVQPVPRTIVSG 181
           GFDPLSHVGY+ELK  SD+ESE+    DD  +         ++++   +VQP PRTI+  
Sbjct: 218 GFDPLSHVGYTELKFISDTESEVMFFSDDGGANAAT-----RKDISVGYVQPEPRTII-- 270

Query: 182 TLLNASLEVLVPNKLIDQDSTPVPSLLVHHEQHDVGELYHMTSSASNMAVGHGLEELNWQ 361
            L++ S       KLID  S P PS+L      DV + +++T++AS   +GH LEEL WQ
Sbjct: 271 -LVDDSAS----EKLIDPVSAPEPSILTSKVLSDVIQSHNVTATASAFPIGHDLEELKWQ 325

Query: 362 QLEQKS 379
           Q + K+
Sbjct: 326 QADWKA 331


>ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|222875257|gb|EEF12388.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 55/126 (43%), Positives = 75/126 (59%)
 Frame = +2

Query: 2   GFDPLSHVGYSELKITSDSESEIPLSDDDDASTLGRETNNHKEEMLARFVQPVPRTIVSG 181
           GFD LSHVGY+ELK  SD+ESE+ LSDDD  + +        E++   +V+P P TI   
Sbjct: 218 GFDHLSHVGYTELKFNSDTESEVMLSDDDGKNAV-------HEDISVGYVKPEPCTI--- 267

Query: 182 TLLNASLEVLVPNKLIDQDSTPVPSLLVHHEQHDVGELYHMTSSASNMAVGHGLEELNWQ 361
           +LL+ S       KLID  S+P PS+L    Q D    + +T+ AS + + H LEELNWQ
Sbjct: 268 SLLDDSF----TEKLIDPVSSPEPSILASKVQSDAINSHTVTAIASRVPIEHDLEELNWQ 323

Query: 362 QLEQKS 379
           Q + K+
Sbjct: 324 QADCKA 329


>ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus communis]
           gi|223538751|gb|EEF40351.1| hypothetical protein
           RCOM_0607680 [Ricinus communis]
          Length = 1162

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/125 (38%), Positives = 72/125 (57%)
 Frame = +2

Query: 5   FDPLSHVGYSELKITSDSESEIPLSDDDDASTLGRETNNHKEEMLARFVQPVPRTIVSGT 184
           FD L H+GY+ELK+ SD+ESE+  SDDD+ +       N K+++    VQ  PR I    
Sbjct: 211 FDHLPHIGYTELKVNSDTESEVLFSDDDNNTNARGHAINTKQDIAVGCVQTEPRII---- 266

Query: 185 LLNASLEVLVPNKLIDQDSTPVPSLLVHHEQHDVGELYHMTSSASNMAVGHGLEELNWQQ 364
              +  + LV  KLID  +     +L    Q D+ E + +TS + ++++GHGLEE+ WQQ
Sbjct: 267 ---SLHDDLVSEKLIDSVTALQTPILASQIQSDLVEFHGVTSKSPSVSLGHGLEEVQWQQ 323

Query: 365 LEQKS 379
            + KS
Sbjct: 324 ADGKS 328


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