BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015201
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like ...   169   5e-40
ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like ...   169   5e-40
gb|AEI72266.1| ring zinc finger transcription factor [Citrus tri...   166   5e-39
ref|XP_002516957.1| ring finger protein, putative [Ricinus commu...   155   8e-36
ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|2...   154   2e-35

>ref|XP_002271292.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 2 [Vitis
           vinifera]
          Length = 320

 Score =  169 bits (427), Expect = 5e-40
 Identities = 91/177 (51%), Positives = 105/177 (59%), Gaps = 5/177 (2%)
 Frame = +1

Query: 115 YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXXXXX 294
           YALSGKIMLSA              HIYARWYL                H++F       
Sbjct: 23  YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH-HLVFYVDPTNP 81

Query: 295 XIS-----QGLDASLLKSLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCNHSFH 459
             S     +GLDAS+L SLP F+Y+S +H  D  ECAVCLSEFEENEKGR LPKCNHSFH
Sbjct: 82  AASVSSPTRGLDASILNSLPVFVYSSKTHT-DMSECAVCLSEFEENEKGRRLPKCNHSFH 140

Query: 460 IGCIDMWFHSHSTCPLCRSPVTITEPENNQQTPIEIVVHSPNTQQPETPSSILCSSC 630
           IGCIDMWFHSHSTCPLCRS V     E+  + P ++V+    T+   T  S LCS+C
Sbjct: 141 IGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGST--SALCSTC 195


>ref|XP_002271253.1| PREDICTED: RING-H2 finger protein ATL2-like isoform 1 [Vitis
           vinifera]
          Length = 317

 Score =  169 bits (427), Expect = 5e-40
 Identities = 91/177 (51%), Positives = 105/177 (59%), Gaps = 5/177 (2%)
 Frame = +1

Query: 115 YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXXXXX 294
           YALSGKIMLSA              HIYARWYL                H++F       
Sbjct: 20  YALSGKIMLSAIVILFAVVVLMVCLHIYARWYLYRTRRRHHARARRRH-HLVFYVDPTNP 78

Query: 295 XIS-----QGLDASLLKSLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCNHSFH 459
             S     +GLDAS+L SLP F+Y+S +H  D  ECAVCLSEFEENEKGR LPKCNHSFH
Sbjct: 79  AASVSSPTRGLDASILNSLPVFVYSSKTHT-DMSECAVCLSEFEENEKGRRLPKCNHSFH 137

Query: 460 IGCIDMWFHSHSTCPLCRSPVTITEPENNQQTPIEIVVHSPNTQQPETPSSILCSSC 630
           IGCIDMWFHSHSTCPLCRS V     E+  + P ++V+    T+   T  S LCS+C
Sbjct: 138 IGCIDMWFHSHSTCPLCRSAVNAETSESASRNPTDVVISMAETEGGST--SALCSTC 192


>gb|AEI72266.1| ring zinc finger transcription factor [Citrus trifoliata]
          Length = 234

 Score =  166 bits (419), Expect = 5e-39
 Identities = 86/184 (46%), Positives = 109/184 (59%), Gaps = 8/184 (4%)
 Frame = +1

Query: 115 YALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXXXXX 294
           YALSG+IMLS+              H+YARWYL                  +F       
Sbjct: 17  YALSGRIMLSSIVILFFVVILMVCLHLYARWYLVQARRRQVRRHRHRRTQFVFYVDPTNP 76

Query: 295 XI--SQGLDASLLKSLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCNHSFHIGC 468
               S+GLD+S+LKSLP F+Y+S +H  DA++CAVCLSEFEENE GR+LP CNHSFHIGC
Sbjct: 77  SATSSRGLDSSVLKSLPVFVYSSKTHA-DAMDCAVCLSEFEENESGRVLPGCNHSFHIGC 135

Query: 469 IDMWFHSHSTCPLCRSPVTI--TEPENNQQ----TPIEIVVHSPNTQQPETPSSILCSSC 630
           IDMWFHSHSTCPLCR+PV +   +PE+  Q     P+ + VH P +   + P+   C S 
Sbjct: 136 IDMWFHSHSTCPLCRTPVELVTAQPEDPVQPDNPVPVRVSVHEPGSSSIDEPTG--CDSS 193

Query: 631 VQEG 642
             +G
Sbjct: 194 AGQG 197


>ref|XP_002516957.1| ring finger protein, putative [Ricinus communis]
           gi|223544045|gb|EEF45571.1| ring finger protein,
           putative [Ricinus communis]
          Length = 292

 Score =  155 bits (391), Expect = 8e-36
 Identities = 89/187 (47%), Positives = 107/187 (57%), Gaps = 5/187 (2%)
 Frame = +1

Query: 94  QYYPQEKYALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIF 273
           +Y   + YALSGKIMLSA              H+YARWYL               AH+IF
Sbjct: 11  EYSTTKGYALSGKIMLSAIIILFFVVIMMVCLHLYARWYLLNARRRQHRRARNRRAHLIF 70

Query: 274 XXXXXXXXI----SQGLDASLLKSLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPK 441
                        S+GLDA++L +LP F Y+S +H  D +ECAVCLSEFEENE+GR LPK
Sbjct: 71  YVDPSNANNVTVPSRGLDAAVLNTLPVFAYSSKTHP-DPIECAVCLSEFEENERGRTLPK 129

Query: 442 CNHSFHIGCIDMWFHSHSTCPLCRSPVTITEPENNQQTPIEIVVHSPNTQQPETPSSI-L 618
           CNHSFHI CIDMWFHSHSTCPLCRS V    PE++ +          N++  ET S   L
Sbjct: 130 CNHSFHIECIDMWFHSHSTCPLCRSAVE-PVPEDSVRV---------NSEINETGSRAGL 179

Query: 619 CSSCVQE 639
           C +C  E
Sbjct: 180 CVTCQHE 186


>ref|XP_002328624.1| predicted protein [Populus trichocarpa] gi|222838606|gb|EEE76971.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  154 bits (388), Expect = 2e-35
 Identities = 84/184 (45%), Positives = 103/184 (55%), Gaps = 6/184 (3%)
 Frame = +1

Query: 106 QEKYALSGKIMLSAXXXXXXXXXXXXXXHIYARWYLAXXXXXXXXXXXXXXAHIIFXXXX 285
           +E YALSGKIMLSA              H+YARWYL                H++F    
Sbjct: 13  REGYALSGKIMLSAIVILFFVVILMVFLHLYARWYLTRARQRQVRRVRNRRTHLVFYVDS 72

Query: 286 XXXX------ISQGLDASLLKSLPTFIYTSNSHEHDALECAVCLSEFEENEKGRLLPKCN 447
                     +++GL+ ++  SLP F+Y+  +H+ D++ECAVCLSEFEENE+GR+LPKCN
Sbjct: 73  AQDPNNVTSHVTRGLEETVKNSLPVFVYSRKTHQ-DSIECAVCLSEFEENERGRVLPKCN 131

Query: 448 HSFHIGCIDMWFHSHSTCPLCRSPVTITEPENNQQTPIEIVVHSPNTQQPETPSSILCSS 627
           HSFH  CIDMWFHSHSTCPLCRSPV   EP      P        N    E  S  LC+S
Sbjct: 132 HSFHTECIDMWFHSHSTCPLCRSPV---EPVAENPVP-----EGSNFGISEAGSG-LCTS 182

Query: 628 CVQE 639
           C  E
Sbjct: 183 CQHE 186