BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015198
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  110   2e-22
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   108   3e-22
ref|XP_002303194.1| predicted protein [Populus trichocarpa] gi|1...   107   1e-21
ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra...   107   1e-21
ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago ...   106   2e-21

>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  110 bits (274), Expect = 2e-22
 Identities = 57/87 (65%), Positives = 68/87 (78%)
 Frame = -1

Query: 271 ETTDWRTTLQPDSRHRIVNSIMDALNRYVPIISGPEGINEVKKIAVMVEEKSYTAANSQV 92
           +T DWRT LQPDSR RIVN IMD L R++P  SG +G+NE+KKIA   EEK YTAA+SQ 
Sbjct: 33  DTGDWRTQLQPDSRQRIVNKIMDTLKRHLPF-SGQDGLNELKKIAGRFEEKIYTAASSQS 91

Query: 91  DYLRKISLKMLTMETKFQNTGSHCMQS 11
           DYLRKISLKML+ME+K QN   + +QS
Sbjct: 92  DYLRKISLKMLSMESKSQNAMPNSLQS 118


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
           gi|223530005|gb|EEF31930.1| transcription cofactor,
           putative [Ricinus communis]
          Length = 1382

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/79 (70%), Positives = 63/79 (79%)
 Frame = -1

Query: 271 ETTDWRTTLQPDSRHRIVNSIMDALNRYVPIISGPEGINEVKKIAVMVEEKSYTAANSQV 92
           +T DWR TLQPDSR RIVN IM+ L R++P  SG EG+ E+KKIAV  EEK YTAA SQ 
Sbjct: 18  DTGDWRATLQPDSRQRIVNKIMETLKRHLPF-SGQEGLEELKKIAVRFEEKIYTAATSQS 76

Query: 91  DYLRKISLKMLTMETKFQN 35
           DYLRKISLKMLTME+K QN
Sbjct: 77  DYLRKISLKMLTMESKSQN 95


>ref|XP_002303194.1| predicted protein [Populus trichocarpa] gi|118486915|gb|ABK95291.1|
           unknown [Populus trichocarpa]
           gi|222840626|gb|EEE78173.1| predicted protein [Populus
           trichocarpa]
          Length = 101

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/79 (69%), Positives = 63/79 (79%)
 Frame = -1

Query: 271 ETTDWRTTLQPDSRHRIVNSIMDALNRYVPIISGPEGINEVKKIAVMVEEKSYTAANSQV 92
           +T DWRT LQPDSR RIVN IM+ L R++P  SG EG+ E+KKIAV  EEK YTAA SQ 
Sbjct: 2   DTGDWRTQLQPDSRQRIVNKIMETLKRHLPF-SGQEGLQELKKIAVRFEEKIYTAATSQS 60

Query: 91  DYLRKISLKMLTMETKFQN 35
           DYLRKISLKMLT+ET+ QN
Sbjct: 61  DYLRKISLKMLTIETRSQN 79


>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           15a-like, partial [Cucumis sativus]
          Length = 589

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/78 (69%), Positives = 64/78 (82%)
 Frame = -1

Query: 271 ETTDWRTTLQPDSRHRIVNSIMDALNRYVPIISGPEGINEVKKIAVMVEEKSYTAANSQV 92
           ET DWR+ LQPDSR RIVN IM+ L R++P+ SG EG++E++KIAV  EEK +TAA SQ 
Sbjct: 17  ETVDWRSQLQPDSRQRIVNKIMETLKRHLPV-SGQEGLSELRKIAVRFEEKIFTAATSQS 75

Query: 91  DYLRKISLKMLTMETKFQ 38
           DYLRKISLKMLTMETK Q
Sbjct: 76  DYLRKISLKMLTMETKTQ 93


>ref|XP_003597955.1| hypothetical protein MTR_2g104400 [Medicago truncatula]
           gi|355487003|gb|AES68206.1| hypothetical protein
           MTR_2g104400 [Medicago truncatula]
          Length = 1289

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/83 (66%), Positives = 66/83 (79%)
 Frame = -1

Query: 271 ETTDWRTTLQPDSRHRIVNSIMDALNRYVPIISGPEGINEVKKIAVMVEEKSYTAANSQV 92
           +T+DWR  LQP+SR RIVN IMD L R++P+ SG EG++E++KIA   EEK YTAA SQ 
Sbjct: 17  DTSDWRGQLQPESRQRIVNKIMDTLKRHLPV-SGQEGLHELRKIAQRFEEKIYTAATSQS 75

Query: 91  DYLRKISLKMLTMETKFQNTGSH 23
           DYLRKISLKMLTMETK Q T S+
Sbjct: 76  DYLRKISLKMLTMETKSQGTISN 98