BLASTX nr result

ID: Coptis23_contig00015194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015194
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632356.1| PREDICTED: uncharacterized protein LOC100854...    77   2e-12
emb|CAN77097.1| hypothetical protein VITISV_002769 [Vitis vinifera]    74   9e-12
ref|XP_002520763.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
ref|XP_002306767.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
gb|ADT82942.1| chloroplast outer envelope protein 8 [Suaeda salsa]     58   7e-07

>ref|XP_003632356.1| PREDICTED: uncharacterized protein LOC100854564 [Vitis vinifera]
          Length = 70

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/89 (49%), Positives = 51/89 (57%)
 Frame = -3

Query: 440 MGSSAKVNSFKSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPXXXXXXXXXXXXX 261
           MG S +    KS +VV GALAFGWL IE+A KPFL+KAR A+DKSDP             
Sbjct: 1   MGKSTEAGPLKSVMVVFGALAFGWLAIELAFKPFLDKARSALDKSDP------------- 47

Query: 260 XXXXXXXXDPDDNEDGVNFGTNKSSSDED 174
                   DPDD+EDG    T KS SDE+
Sbjct: 48  ------TRDPDDDEDGGT--TQKSLSDEE 68


>emb|CAN77097.1| hypothetical protein VITISV_002769 [Vitis vinifera]
          Length = 70

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/89 (47%), Positives = 50/89 (56%)
 Frame = -3

Query: 440 MGSSAKVNSFKSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPXXXXXXXXXXXXX 261
           MG S +    KS +VV GALAFGWL IE+A KPFL+KAR A+DKSDP             
Sbjct: 1   MGKSTEAGPLKSVMVVFGALAFGWLAIELAFKPFLDKARSALDKSDP------------- 47

Query: 260 XXXXXXXXDPDDNEDGVNFGTNKSSSDED 174
                   DPDD+EDG   GT + S  +D
Sbjct: 48  ------TRDPDDDEDG---GTTQRSLSDD 67


>ref|XP_002520763.1| conserved hypothetical protein [Ricinus communis]
           gi|223540148|gb|EEF41725.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 69

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/37 (78%), Positives = 33/37 (89%)
 Frame = -3

Query: 410 KSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDP 300
           K A+VV+GALAFGWL IE+A KPFL+KAR AMDKSDP
Sbjct: 7   KQAMVVVGALAFGWLAIEMAFKPFLDKARAAMDKSDP 43


>ref|XP_002306767.1| predicted protein [Populus trichocarpa] gi|222856216|gb|EEE93763.1|
           predicted protein [Populus trichocarpa]
          Length = 77

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -3

Query: 410 KSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDP 300
           K A VV GALAFGWL IE+A KPFL+KAR AMDKSDP
Sbjct: 7   KQAAVVFGALAFGWLAIEMAFKPFLDKARSAMDKSDP 43


>gb|ADT82942.1| chloroplast outer envelope protein 8 [Suaeda salsa]
          Length = 76

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -3

Query: 431 SAKVNSFKSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDP 300
           + K  S K A +V+ ALAFGWLTIE+A KP+L+KAR  ++KSDP
Sbjct: 5   ATKSGSLKQAAIVMSALAFGWLTIELAFKPWLDKARATLNKSDP 48


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