BLASTX nr result

ID: Coptis23_contig00015187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015187
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    79   5e-13
ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago...    78   8e-13
emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera]    74   2e-11
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    72   4e-11
emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]    72   4e-11

>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +3

Query: 6   VWNKHVHPRASGIVWKLIQKAYPTDDRVQQKGIKLASRCRLCGKAEESTQHLLWECDVTR 185
           +W+K + P  S + W+LI    PTD+++QQ+G +L S C LCG   E++ HL +EC    
Sbjct: 116 IWSKDIPPSKSILTWRLIHDKVPTDEKLQQRGCQLPSMCSLCGTHVETSFHLFFECCFAF 175

Query: 186 DMRCWLAQTFKASLPVLDLQSVMKAC-KHHSPIRQELWNAGLVQFMIGIWKTRNKIYFEE 362
            + CW A    +SL    +  +   C +  SP  + +  A +V  +  IW  RN+ + + 
Sbjct: 176 RIWCWFASVLDSSLHFQSIPDIWSVCDRGWSPQCKVVNQATIVNIISTIWYNRNQRWIKF 235

Query: 363 RT 368
            T
Sbjct: 236 NT 237


>ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula]
           gi|355506897|gb|AES88039.1| Glycerol-3-phosphate
           dehydrogenase [Medicago truncatula]
          Length = 866

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/145 (26%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
 Frame = +3

Query: 6   VWNKHVHPRASGIVWKLIQKAYPTDDRVQQKGIKLASRCRLCGKAEESTQHLLWECDVTR 185
           +W+ ++ P  S + W+L+    P D++++++G  +   C LC  AEES+ HL +EC    
Sbjct: 47  IWSPNIPPSKSLLAWRLMNDKIPVDEKLKERGHVIPFICSLCMTAEESSFHLFFECSYAV 106

Query: 186 DMRCWLAQTFKASLPVLDLQSVMK-ACKHHSPIRQELWNAGLVQFMIGIWKTRNKIYFEE 362
            + CWLA     SL  L L+ +   + +  SP       + ++  +  IW  RN   F+ 
Sbjct: 107 HLWCWLASILNQSLHFLALEEIWSLSARGWSPQFTLAITSTVINILSAIWNARNTYRFKN 166

Query: 363 RTLNIQLLKKDIMVGINIAGHLAKV 437
           R ++ + +   I+V ++++   +K+
Sbjct: 167 RKIHWESVISQIIVNVSLSASNSKL 191


>emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera]
          Length = 793

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 48/138 (34%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
 Frame = +3

Query: 6    VWNKHVHPRASGIVWKLIQKAYPTDDRVQQKGIKLASRCRLCGKAEESTQHLLWECDVTR 185
            +WN +V PR S   W+       T D++Q++G  LA+RC LC + EES  H+L  C   R
Sbjct: 656  IWNVYVQPRVSFFGWEATWGKALTLDQLQKRGWPLANRCYLCQRHEESIDHILLHCAKAR 715

Query: 186  DMRCWLAQTF----------KASLPVLDLQSVMKACKHHSPIRQELWNAGLVQFMIGIWK 335
             +   L   F          KA+L   D   V K        R+ +W A  +     +WK
Sbjct: 716  TLWALLCSLFGVQWVLPATVKATLLGWDGSFVGKK-------RKGVWRANPLCLFWMVWK 768

Query: 336  TRNKIYFEERTLNIQLLK 389
             RNK+ FEE  L+IQ LK
Sbjct: 769  VRNKVVFEEEELSIQRLK 786


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
 Frame = +3

Query: 3   WVWNKHVHPRASGIVWKLIQKAYPTDDRVQQKGIKLASRCRLCGKAEESTQHLLWECDVT 182
           ++WN ++ P  S I W+L+    PTD+ ++++G  + S C  C K+ ES+QH+ +EC VT
Sbjct: 39  FLWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSICCFCMKSAESSQHIFFECHVT 98

Query: 183 RDMRCWLAQTFKASLPVLD----LQSVMKACKHHSPIRQELWNAGLVQFMIGIWKTRNKI 350
             +  WL    K +  +LD    LQ +++     S +   + N+ ++  +  IW  RN+ 
Sbjct: 99  SRLWDWLG---KGTDKLLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTIWSIWIERNQR 155

Query: 351 YFEERTLNIQLLKKDIMVGINIAGHLAKV 437
            F  +   +  L   I+  + ++  L  +
Sbjct: 156 CFHNKHQAMTTLFNIILAEVKMSFSLCMI 184


>emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]
          Length = 577

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
 Frame = +3

Query: 6   VWNKHVHPRASGIVWKLIQKAYPTDDRVQQKGIKLASRCRLCGKAEESTQHLLWECDVTR 185
           +W   V PR S   W+       T D++Q++G  LA+RC LC + EES  H+L  CD  R
Sbjct: 434 IWKVSVQPRVSFFGWEATWGKTLTLDQLQRRGWALANRCYLCQRHEESIDHILLHCDKAR 493

Query: 186 DMRCWLAQTFKASLPVLDLQSVMKACKHHSPI---RQELWNAGLVQFMIGIWKTRNKIYF 356
            +   L   F     +  +   M +  + + +   R+ +W A  +     +WKTRNK+ F
Sbjct: 494 TLWVLLFSMFGVQWVLPAMVKEMLSGWNGTFVGKKRKGVWKASPLCLFWTVWKTRNKVAF 553

Query: 357 EERTLNIQLLKKDIM 401
           +E  L+IQ LK   +
Sbjct: 554 KEEELSIQRLKSSFV 568


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