BLASTX nr result
ID: Coptis23_contig00015186
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00015186
(1138 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinu... 177 4e-44
ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259... 169 1e-39
ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cuc... 168 3e-39
ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221... 168 3e-39
ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea ma... 165 2e-38
>ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1,
putative [Ricinus communis]
Length = 544
Score = 177 bits (450), Expect(2) = 4e-44
Identities = 118/304 (38%), Positives = 146/304 (48%), Gaps = 3/304 (0%)
Frame = +2
Query: 2 MVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLVNEVIS 181
++IGKGGETIK MQS+SGAR+Q+IPL LPPGD +TER V+I+G EQIE AK+LVN+V++
Sbjct: 193 LLIGKGGETIKYMQSRSGARMQIIPLHLPPGDPTTERTVYINGLTEQIEAAKELVNDVLN 252
Query: 182 ENRVRNPPVGNNQMQQAYYPPANWVPPVQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXM 361
R+ +P ++ Q Y NW P Q+
Sbjct: 253 GKRIIDPTGSSSYGQPTYPATGNWAQPGQT--PMQQPQYGYAQPGNQPTPPAYYGNYTQQ 310
Query: 362 VGWDQSN--SLAGPPQQSTGNYYGQQNQTGSAAPNVNLSYGQTQS-TSQNYEQGYSHQPQ 532
WDQSN +++ Q + YYGQQ Q GSA +N SY QT S Y YS Q
Sbjct: 311 PAWDQSNPTTMSQTQQMAGYGYYGQQPQMGSAP--LNSSYNQTPPVASSGYGNSYSQQTS 368
Query: 533 GSGQNISGQVPPYDQQNSYVTSGYGPPNVSSQLDGTIPTQPYATQPPAYQGYYGQSPAIA 712
GQNIS Q P +QQ Y TS YG VSSQ DG I +Q P Y Q A
Sbjct: 369 NYGQNISSQTPTLEQQRPYATSNYGSAAVSSQSDGAISSQSTQAAPAYPPPAYNQQVA-D 427
Query: 713 PTPAYGPQSYAGPLPPHPXXXXXXXXXXXXXXXPPAHPPAPLQSQPPISQPVYGQAGYPP 892
P + YAG PP + A +QPVYGQ GYP
Sbjct: 428 PQTYWTAAGYAGQPPPQ------------TGYDQTGYSQAGYGVSLSSNQPVYGQGGYPL 475
Query: 893 QAAP 904
Q +P
Sbjct: 476 QPSP 479
Score = 28.1 bits (61), Expect(2) = 4e-44
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +1
Query: 1000 NNFQGATAYGMTHPQMQAQPPPKT----YAAPLPYGAERNGDNS 1119
N QG G PQ++AQP + ++ L YGAE + NS
Sbjct: 483 NYAQGTNPLGYGQPQLEAQPQSQPSNNGHSQSLAYGAEIHDGNS 526
>ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 169 bits (428), Expect = 1e-39
Identities = 132/352 (37%), Positives = 155/352 (44%), Gaps = 53/352 (15%)
Frame = +2
Query: 2 MVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLVNEVIS 181
++IGKGGETIK+MQ+++GARIQVIPL LPPGDTS ER V IDGT EQIE AKQLVNEVIS
Sbjct: 241 LIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQLVNEVIS 300
Query: 182 ENRVRNPPVGNNQMQQAYY--PPANW-----VPPVQS---SXXXXXXXXXXXXXXXXXXX 331
ENR+RNP + QQ Y PP+ W PP+Q S
Sbjct: 301 ENRIRNPAMAGGYPQQGYQARPPSGWGAPPGAPPMQQPGYSYAQPGSYPGPSPQYNMSQP 360
Query: 332 XXXXXXXXXMVGWDQSNSLAGPPQQSTG-----NYYGQQN-------QTGSAAPNVNLSY 475
GWDQ+ A PP Q T +YYGQQ G + P N Y
Sbjct: 361 AYAGYSQPNATGWDQT---AAPPSQQTTPGSGYDYYGQQQTQQQQQAHGGPSGPADNSGY 417
Query: 476 GQTQSTSQNYE---QGYSHQPQGSGQNIS------GQ---VPPYDQQNSY-VTSGYGPPN 616
Q + Y QGY G G + GQ +P YDQQ Y +GYG N
Sbjct: 418 NYNQPPASGYNQQGQGYPQDGYGGGYHAPAPQPGYGQPQPIPGYDQQQGYNSATGYG--N 475
Query: 617 VSSQLDGTIPTQPYATQPPAYQGYYGQSPAIAPTPAYGPQSYAGPLP-PHPXXXXXXXXX 793
V++ PTQ T QG GQ+P A G Q Y P P P
Sbjct: 476 VAN------PTQEGHTTSYGAQGETGQAPPSVQPSAIGQQGYNTQQPSPSPASYPPQGSN 529
Query: 794 XXXXXXPP-------AHPPA----------PLQSQPPISQPVYGQAGYPPQA 898
PP + PPA P + P + PVYGQ P A
Sbjct: 530 QPAYGMPPTSQTGFGSQPPAQSGYTTNYGPPQAQKAPANPPVYGQTQQSPSA 581
>ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
Length = 516
Score = 168 bits (425), Expect = 3e-39
Identities = 127/316 (40%), Positives = 153/316 (48%), Gaps = 32/316 (10%)
Frame = +2
Query: 2 MVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLVNEVIS 181
+VIGKGGETIKS+QSKS AR+Q+IPL LPPGDTSTER+V+I+G +EQIE AK+L+NEVIS
Sbjct: 193 LVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVIS 252
Query: 182 ENRVRNPPVGNNQMQQAYYPPANW-----VPPVQSSXXXXXXXXXXXXXXXXXXXXXXXX 346
R+ + + Q Y NW PP+Q
Sbjct: 253 GKRLVSET--TSYAQPTYPSTNNWSQAGQQPPLQQQ--QPQYGYAAGTYPPPQGPPYYST 308
Query: 347 XXXXMVGWDQSN-SLAGPPQQSTG-NYYGQQNQTGSAAPNV-NLSYGQTQST-SQNYEQG 514
+ WDQSN S P QSTG NYYGQQ+Q GSA P + SYGQ S+ + Y+Q
Sbjct: 309 YPAQVASWDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQYHDYSYGQPASSGTHGYDQS 368
Query: 515 YSHQPQGSGQNISGQVPP-YDQQNSYVTSGYGP---PNVSSQLDGTIPTQPY--ATQPPA 676
YS Q GQ+PP YDQQN Y+ SG P P+ + +GT PT Y +T
Sbjct: 369 YSQQAPS-----YGQIPPSYDQQNMYLNSGSAPSALPSSNGTSEGTYPTAAYQASTGYWT 423
Query: 677 YQ-----------------GYYGQSPAIAPTPAYGPQSYAGPLPPHPXXXXXXXXXXXXX 805
YQ Y S A P YG Y PP P
Sbjct: 424 YQTTDQTQSLPQTGNDQSGSYQTVSGGHAQPPVYGQSVY----PPPP-------GVYSAP 472
Query: 806 XXPPAHPPAPLQSQPP 853
PP AP QSQPP
Sbjct: 473 APPPPEMVAPTQSQPP 488
Score = 62.0 bits (149), Expect = 3e-07
Identities = 82/322 (25%), Positives = 112/322 (34%), Gaps = 21/322 (6%)
Frame = +2
Query: 2 MVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLVNEVIS 181
++IGKGGETIK +Q +SGA+IQ I S R+V + GT EQ+ A+QL+NEVI+
Sbjct: 99 LIIGKGGETIKYLQLQSGAKIQ-ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIA 157
Query: 182 ENRVRNPPVGNNQMQQAYYPPA-NWVPPVQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
E NQ + P +V + ++
Sbjct: 158 EADSGGSASTTNQAINSSQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARV---- 213
Query: 359 MVGWDQSNSLAGPPQQSTGN----YYGQQNQTGSAAPNVNLSYGQTQSTSQNYEQGYSHQ 526
Q L PP ++ G + Q SA +N + S+
Sbjct: 214 -----QIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTY 268
Query: 527 PQGSGQNISGQVPPYDQQN---SYVTSGYGPPNVSSQLDGTIPTQPYATQPPAYQGYYGQ 697
P + + +GQ PP QQ Y Y PP PY + PA + Q
Sbjct: 269 PSTNNWSQAGQQPPLQQQQPQYGYAAGTYPPPQ----------GPPYYSTYPAQVASWDQ 318
Query: 698 SPAIAPTPA--------YGPQSYAGPLPP--HPXXXXXXXXXXXXXXXPPAHPPAPLQSQ 847
S P+ YG QS G PP H AP Q
Sbjct: 319 SNQSTVQPSDQSTGYNYYGQQSQVGSAPPQYHDYSYGQPASSGTHGYDQSYSQQAPSYGQ 378
Query: 848 PPIS---QPVYGQAGYPPQAAP 904
P S Q +Y +G P A P
Sbjct: 379 IPPSYDQQNMYLNSGSAPSALP 400
>ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
Length = 516
Score = 168 bits (425), Expect = 3e-39
Identities = 127/316 (40%), Positives = 153/316 (48%), Gaps = 32/316 (10%)
Frame = +2
Query: 2 MVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLVNEVIS 181
+VIGKGGETIKS+QSKS AR+Q+IPL LPPGDTSTER+V+I+G +EQIE AK+L+NEVIS
Sbjct: 193 LVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVIS 252
Query: 182 ENRVRNPPVGNNQMQQAYYPPANW-----VPPVQSSXXXXXXXXXXXXXXXXXXXXXXXX 346
R+ + + Q Y NW PP+Q
Sbjct: 253 GKRLVSET--TSYAQPTYPSTNNWSQAGQQPPLQQQ--QPQYGYAAGTYPPPQGPPYYST 308
Query: 347 XXXXMVGWDQSN-SLAGPPQQSTG-NYYGQQNQTGSAAPNV-NLSYGQTQST-SQNYEQG 514
+ WDQSN S P QSTG NYYGQQ+Q GSA P + SYGQ S+ + Y+Q
Sbjct: 309 YPAQVASWDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQFHDYSYGQPASSGTHGYDQS 368
Query: 515 YSHQPQGSGQNISGQVPP-YDQQNSYVTSGYGP---PNVSSQLDGTIPTQPY--ATQPPA 676
YS Q GQ+PP YDQQN Y+ SG P P+ + +GT PT Y +T
Sbjct: 369 YSQQAPS-----YGQIPPSYDQQNMYLNSGSAPSALPSSNGTSEGTYPTAAYQASTGYWT 423
Query: 677 YQ-----------------GYYGQSPAIAPTPAYGPQSYAGPLPPHPXXXXXXXXXXXXX 805
YQ Y S A P YG Y PP P
Sbjct: 424 YQTTDQTQSLPQTGNDQSGSYQTVSGGHAQPPVYGQSVY----PPPP-------GVYSAP 472
Query: 806 XXPPAHPPAPLQSQPP 853
PP AP QSQPP
Sbjct: 473 APPPPEMVAPTQSQPP 488
Score = 62.0 bits (149), Expect = 3e-07
Identities = 82/322 (25%), Positives = 112/322 (34%), Gaps = 21/322 (6%)
Frame = +2
Query: 2 MVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLVNEVIS 181
++IGKGGETIK +Q +SGA+IQ I S R+V + GT EQ+ A+QL+NEVI+
Sbjct: 99 LIIGKGGETIKYLQLQSGAKIQ-ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIA 157
Query: 182 ENRVRNPPVGNNQMQQAYYPPA-NWVPPVQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 358
E NQ + P +V + ++
Sbjct: 158 EADSGGSASTTNQAINSSQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARV---- 213
Query: 359 MVGWDQSNSLAGPPQQSTGN----YYGQQNQTGSAAPNVNLSYGQTQSTSQNYEQGYSHQ 526
Q L PP ++ G + Q SA +N + S+
Sbjct: 214 -----QIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTY 268
Query: 527 PQGSGQNISGQVPPYDQQN---SYVTSGYGPPNVSSQLDGTIPTQPYATQPPAYQGYYGQ 697
P + + +GQ PP QQ Y Y PP PY + PA + Q
Sbjct: 269 PSTNNWSQAGQQPPLQQQQPQYGYAAGTYPPPQ----------GPPYYSTYPAQVASWDQ 318
Query: 698 SPAIAPTPA--------YGPQSYAGPLPP--HPXXXXXXXXXXXXXXXPPAHPPAPLQSQ 847
S P+ YG QS G PP H AP Q
Sbjct: 319 SNQSTVQPSDQSTGYNYYGQQSQVGSAPPQFHDYSYGQPASSGTHGYDQSYSQQAPSYGQ 378
Query: 848 PPIS---QPVYGQAGYPPQAAP 904
P S Q +Y +G P A P
Sbjct: 379 IPPSYDQQNMYLNSGSAPSALP 400
>ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein
ZEAMMB73_610626 [Zea mays] gi|413936737|gb|AFW71288.1|
hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 165 bits (417), Expect = 2e-38
Identities = 134/353 (37%), Positives = 153/353 (43%), Gaps = 54/353 (15%)
Frame = +2
Query: 2 MVIGKGGETIKSMQSKSGARIQVIPLRLPPGDTSTERNVHIDGTQEQIEFAKQLVNEVIS 181
++IGKGGETIKSMQ+KSGARIQVIPL LP GDTSTER VHIDGTQEQIE AKQLV EV S
Sbjct: 250 LIIGKGGETIKSMQAKSGARIQVIPLHLPAGDTSTERTVHIDGTQEQIEHAKQLVAEVTS 309
Query: 182 ENRVRNPPVGNNQMQQAYYPP---ANW----VPPVQS-----SXXXXXXXXXXXXXXXXX 325
ENR RNP G QQ Y+PP +NW PP QS
Sbjct: 310 ENRARNPMSG-GYSQQGYHPPRPQSNWGPPSAPPQQSGYGYMQPGAYPGAPPQYGAPQQP 368
Query: 326 XXXXXXXXXXXMVGWDQS-NSLAGPPQQSTG-NYYGQQNQ---------TGSAAPNVNLS 472
GWDQS N + TG +YY QQ Q T ++ + +
Sbjct: 369 YGSYPPTSGGYQTGWDQSQNQQSHTTPPGTGYDYYSQQQQPQQQQSAPGTAASTDATSYN 428
Query: 473 YGQTQS-TSQNYEQGYSHQPQG---------SGQNISGQVPPYDQQNSYVTSGYGPPNVS 622
YGQ + SQ Y+ Y+ G SG GQ Y QQ Y GYG
Sbjct: 429 YGQPSTYASQGYDSTYTQHSGGQQAYGHDGYSGYQTQGQQQGYSQQTGYDQQGYGASAYG 488
Query: 623 SQLDGTIPTQPYA-------------TQPPA---YQGYYGQSPAIA----PTPAYGPQSY 742
S + T Y T PA + GY Q P A P P Y
Sbjct: 489 SAANSTQDGSSYGGPGGATQASPGQQTSTPAAGSHPGYASQPPTSAAASYPVQGSAPSGY 548
Query: 743 AGPLPPHPXXXXXXXXXXXXXXXPPAH-PPAPLQSQPPISQPVYGQAGYPPQA 898
P PP P P A+ P+P +PP S P YGQA P A
Sbjct: 549 GAP-PPQP--GYGTQPPQQGGYGPGAYGQPSPHGEKPPASSP-YGQAPPPGSA 597