BLASTX nr result

ID: Coptis23_contig00015169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015169
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273638.1| PREDICTED: casparian strip membrane protein ...    71   1e-10
ref|XP_002276085.1| PREDICTED: casparian strip membrane protein ...    69   4e-10
sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane p...    67   2e-09
sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane p...    66   5e-09
ref|XP_002309415.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08

>ref|XP_002273638.1| PREDICTED: casparian strip membrane protein VIT_06s0080g00840
           [Vitis vinifera] gi|226713612|sp|A7QF77.1|CASP1_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_06s0080g00840 gi|296084880|emb|CBI28289.3| unnamed
           protein product [Vitis vinifera]
          Length = 201

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/56 (62%), Positives = 40/56 (71%)
 Frame = -1

Query: 170 SKVIKHEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKAS 3
           +K I+H K G KRG+AIFDFILR+          T MGTTDQTLPF TQFFQF+AS
Sbjct: 26  TKAIQHPKAGLKRGLAIFDFILRLSAIGAALAATTTMGTTDQTLPFFTQFFQFQAS 81


>ref|XP_002276085.1| PREDICTED: casparian strip membrane protein VIT_08s0007g02880
           [Vitis vinifera] gi|226713603|sp|A7PP95.1|CASP2_VITVI
           RecName: Full=Casparian strip membrane protein
           VIT_08s0007g02880 gi|297740155|emb|CBI30337.3| unnamed
           protein product [Vitis vinifera]
          Length = 209

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 32/56 (57%), Positives = 39/56 (69%)
 Frame = -1

Query: 170 SKVIKHEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKAS 3
           +K   H   GWK+G+AIFDF+LR+         AT MGTTD+TLPF TQFFQF+AS
Sbjct: 34  TKATPHPNAGWKKGLAIFDFLLRLAAIAATLAAATTMGTTDETLPFFTQFFQFQAS 89


>sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane protein 3
          Length = 207

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 33/51 (64%), Positives = 36/51 (70%)
 Frame = -1

Query: 155 HEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKAS 3
           H++ G KRGVAIFDFILRI            MGTTDQTLPF TQFFQF+AS
Sbjct: 37  HKRGGMKRGVAIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQAS 87


>sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane protein 1
          Length = 208

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 31/47 (65%), Positives = 34/47 (72%)
 Frame = -1

Query: 143 GWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKAS 3
           GW+RGV+IFDFILRI            MGTTDQTLPF TQFFQF+AS
Sbjct: 42  GWRRGVSIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQAS 88


>ref|XP_002309415.1| predicted protein [Populus trichocarpa]
           gi|288559172|sp|B9HBX2.1|CASP4_POPTR RecName:
           Full=Casparian strip membrane protein POPTRDRAFT_763057
           gi|222855391|gb|EEE92938.1| predicted protein [Populus
           trichocarpa]
          Length = 199

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/54 (55%), Positives = 40/54 (74%)
 Frame = -1

Query: 164 VIKHEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKAS 3
           V ++EK G+++G+AIFDFILR+         A  MGT+D+TLPF TQFFQF+AS
Sbjct: 26  VSRNEKGGYRKGIAIFDFILRLAAIATALAAAAAMGTSDETLPFFTQFFQFQAS 79


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