BLASTX nr result
ID: Coptis23_contig00015169
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00015169 (572 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273638.1| PREDICTED: casparian strip membrane protein ... 71 1e-10 ref|XP_002276085.1| PREDICTED: casparian strip membrane protein ... 69 4e-10 sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane p... 67 2e-09 sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane p... 66 5e-09 ref|XP_002309415.1| predicted protein [Populus trichocarpa] gi|2... 64 2e-08 >ref|XP_002273638.1| PREDICTED: casparian strip membrane protein VIT_06s0080g00840 [Vitis vinifera] gi|226713612|sp|A7QF77.1|CASP1_VITVI RecName: Full=Casparian strip membrane protein VIT_06s0080g00840 gi|296084880|emb|CBI28289.3| unnamed protein product [Vitis vinifera] Length = 201 Score = 71.2 bits (173), Expect = 1e-10 Identities = 35/56 (62%), Positives = 40/56 (71%) Frame = -1 Query: 170 SKVIKHEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKAS 3 +K I+H K G KRG+AIFDFILR+ T MGTTDQTLPF TQFFQF+AS Sbjct: 26 TKAIQHPKAGLKRGLAIFDFILRLSAIGAALAATTTMGTTDQTLPFFTQFFQFQAS 81 >ref|XP_002276085.1| PREDICTED: casparian strip membrane protein VIT_08s0007g02880 [Vitis vinifera] gi|226713603|sp|A7PP95.1|CASP2_VITVI RecName: Full=Casparian strip membrane protein VIT_08s0007g02880 gi|297740155|emb|CBI30337.3| unnamed protein product [Vitis vinifera] Length = 209 Score = 69.3 bits (168), Expect = 4e-10 Identities = 32/56 (57%), Positives = 39/56 (69%) Frame = -1 Query: 170 SKVIKHEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKAS 3 +K H GWK+G+AIFDF+LR+ AT MGTTD+TLPF TQFFQF+AS Sbjct: 34 TKATPHPNAGWKKGLAIFDFLLRLAAIAATLAAATTMGTTDETLPFFTQFFQFQAS 89 >sp|P0DI53.1|CASP3_MIMGU RecName: Full=Casparian strip membrane protein 3 Length = 207 Score = 67.0 bits (162), Expect = 2e-09 Identities = 33/51 (64%), Positives = 36/51 (70%) Frame = -1 Query: 155 HEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKAS 3 H++ G KRGVAIFDFILRI MGTTDQTLPF TQFFQF+AS Sbjct: 37 HKRGGMKRGVAIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQAS 87 >sp|P0DI30.1|CASP1_TRIPD RecName: Full=Casparian strip membrane protein 1 Length = 208 Score = 65.9 bits (159), Expect = 5e-09 Identities = 31/47 (65%), Positives = 34/47 (72%) Frame = -1 Query: 143 GWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKAS 3 GW+RGV+IFDFILRI MGTTDQTLPF TQFFQF+AS Sbjct: 42 GWRRGVSIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQAS 88 >ref|XP_002309415.1| predicted protein [Populus trichocarpa] gi|288559172|sp|B9HBX2.1|CASP4_POPTR RecName: Full=Casparian strip membrane protein POPTRDRAFT_763057 gi|222855391|gb|EEE92938.1| predicted protein [Populus trichocarpa] Length = 199 Score = 63.9 bits (154), Expect = 2e-08 Identities = 30/54 (55%), Positives = 40/54 (74%) Frame = -1 Query: 164 VIKHEKRGWKRGVAIFDFILRIVXXXXXXXXATVMGTTDQTLPFVTQFFQFKAS 3 V ++EK G+++G+AIFDFILR+ A MGT+D+TLPF TQFFQF+AS Sbjct: 26 VSRNEKGGYRKGIAIFDFILRLAAIATALAAAAAMGTSDETLPFFTQFFQFQAS 79