BLASTX nr result

ID: Coptis23_contig00015166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015166
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 ...   200   1e-49
ref|XP_002517277.1| cyclin B, putative [Ricinus communis] gi|223...   186   3e-45
ref|XP_003554105.1| PREDICTED: G2/mitotic-specific cyclin S13-6 ...   183   2e-44
gb|ACU21049.1| unknown [Glycine max]                                  183   2e-44
ref|XP_002323225.1| cyclin b [Populus trichocarpa] gi|222867855|...   183   2e-44

>ref|XP_002283152.1| PREDICTED: G2/mitotic-specific cyclin S13-6 [Vitis vinifera]
           gi|297741679|emb|CBI32811.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  200 bits (509), Expect = 1e-49
 Identities = 113/202 (55%), Positives = 138/202 (68%), Gaps = 7/202 (3%)
 Frame = +3

Query: 9   QETVTENNNKKQIVVVVDG-PIV------GKEVAAIRKVALKNVTVRPKPEKVIEISPXX 167
           Q      NNKK + V VDG PI+      GK   A +  A K VT++PKPE+VIEISP  
Sbjct: 75  QAAAAAENNKKAVCVNVDGAPIITDGGAAGKAPVAAKAAAQKKVTIKPKPEQVIEISPDS 134

Query: 168 XXXXXXXKSEIRRQSREASSKKKKVHTLTSVLTARSKAACGITNKPKXXXXXXXXXXXXN 347
                  K   +++ RE SSKK  V T+TS+LTARSK ACG+TNKPK            N
Sbjct: 135 EEVKQE-KPVSKKKGREGSSKKN-VKTMTSILTARSKVACGLTNKPKEQIVDIDAADAGN 192

Query: 348 HLAAVDYVEDIYKYYKLAENSS*VHAYMYTQHEINEKMRDILVEWLIEVHNKFELMPETL 527
            LAAV+YVEDIYK+YKL E+ S VH YM +Q EINEKMR ILV+WLIEVH+KFELMPETL
Sbjct: 193 DLAAVEYVEDIYKFYKLIESESQVHDYMDSQAEINEKMRAILVDWLIEVHHKFELMPETL 252

Query: 528 YLTVHIVDRYLSMRSVSRKILQ 593
           YLT++IVDR+LS+++V R+ LQ
Sbjct: 253 YLTINIVDRFLSIKTVPRRELQ 274


>ref|XP_002517277.1| cyclin B, putative [Ricinus communis] gi|223543540|gb|EEF45070.1|
           cyclin B, putative [Ricinus communis]
          Length = 455

 Score =  186 bits (471), Expect = 3e-45
 Identities = 103/201 (51%), Positives = 129/201 (64%), Gaps = 6/201 (2%)
 Frame = +3

Query: 9   QETVTENNNKKQIVVVVDGPIV--GKEVAAIRKVAL-KNVTVRPKPEKVIEISPXXXXXX 179
           Q      NNKK + V VD  +   GK+ A   K A  K V V+PKP++VIEISP      
Sbjct: 74  QNAAAAENNKKLVCVNVDKVVAPDGKKAAVAAKPAQQKKVIVKPKPQEVIEISPDTEKEV 133

Query: 180 XXXKSE---IRRQSREASSKKKKVHTLTSVLTARSKAACGITNKPKXXXXXXXXXXXXNH 350
              K +   +  +     S KKKV TL+SVLTARSK ACG+TNKPK            N 
Sbjct: 134 VIEKQQKKAVEMKKELEGSAKKKVQTLSSVLTARSKLACGLTNKPKEDIIDIDAADANND 193

Query: 351 LAAVDYVEDIYKYYKLAENSS*VHAYMYTQHEINEKMRDILVEWLIEVHNKFELMPETLY 530
           LA V+YVEDIYK+YKL EN S  H YM +Q +INEKMR IL++WLI+VH KFEL PETLY
Sbjct: 194 LAGVEYVEDIYKFYKLVENESRPHNYMASQPDINEKMRGILIDWLIDVHQKFELSPETLY 253

Query: 531 LTVHIVDRYLSMRSVSRKILQ 593
           LT++I+DR+L +++VSR+ LQ
Sbjct: 254 LTINIIDRFLCVKNVSRRELQ 274


>ref|XP_003554105.1| PREDICTED: G2/mitotic-specific cyclin S13-6 [Glycine max]
          Length = 455

 Score =  183 bits (464), Expect = 2e-44
 Identities = 106/205 (51%), Positives = 133/205 (64%), Gaps = 10/205 (4%)
 Frame = +3

Query: 9   QETVTENNNKKQIVVVVDGP--IVGKEVAAIRKVALK------NVTVRPKPEKVIEI--S 158
           Q      NNKKQ    V GP  +    VA  ++VA K       VTV+PKPE+VI+I  S
Sbjct: 72  QAAAAAGNNKKQACANVAGPPAVANGGVAVAKRVAPKPGPKKVTVTVKPKPEEVIDIEAS 131

Query: 159 PXXXXXXXXXKSEIRRQSREASSKKKKVHTLTSVLTARSKAACGITNKPKXXXXXXXXXX 338
           P         K+E      +A+SKKK  HTLTSVLTARSKAACGITNKPK          
Sbjct: 132 PDKKEVLKDKKNE-----GDANSKKKSQHTLTSVLTARSKAACGITNKPKEQIIDIDASD 186

Query: 339 XXNHLAAVDYVEDIYKYYKLAENSS*VHAYMYTQHEINEKMRDILVEWLIEVHNKFELMP 518
             N LAAV+Y++DIYK+YKL EN S  H Y+ +Q EINE+MR ILV+WLI+VH KFEL  
Sbjct: 187 VDNELAAVEYIDDIYKFYKLVENESHPHDYIDSQPEINERMRAILVDWLIDVHTKFELSL 246

Query: 519 ETLYLTVHIVDRYLSMRSVSRKILQ 593
           ETLYLT++I+DR+L++++V R+ LQ
Sbjct: 247 ETLYLTINIIDRFLAVKTVPRRELQ 271


>gb|ACU21049.1| unknown [Glycine max]
          Length = 353

 Score =  183 bits (464), Expect = 2e-44
 Identities = 106/205 (51%), Positives = 133/205 (64%), Gaps = 10/205 (4%)
 Frame = +3

Query: 9   QETVTENNNKKQIVVVVDGP--IVGKEVAAIRKVALK------NVTVRPKPEKVIEI--S 158
           Q      NNKKQ    V GP  +    VA  ++VA K       VTV+PKPE+VI+I  S
Sbjct: 72  QAAAAAGNNKKQACANVAGPPAVANGGVAVAKRVAPKPGPKKVTVTVKPKPEEVIDIEAS 131

Query: 159 PXXXXXXXXXKSEIRRQSREASSKKKKVHTLTSVLTARSKAACGITNKPKXXXXXXXXXX 338
           P         K+E      +A+SKKK  HTLTSVLTARSKAACGITNKPK          
Sbjct: 132 PDKKEVLKDKKNE-----GDANSKKKSQHTLTSVLTARSKAACGITNKPKEQIIDIDASD 186

Query: 339 XXNHLAAVDYVEDIYKYYKLAENSS*VHAYMYTQHEINEKMRDILVEWLIEVHNKFELMP 518
             N LAAV+Y++DIYK+YKL EN S  H Y+ +Q EINE+MR ILV+WLI+VH KFEL  
Sbjct: 187 VDNELAAVEYIDDIYKFYKLVENESHPHDYIDSQPEINERMRAILVDWLIDVHTKFELSL 246

Query: 519 ETLYLTVHIVDRYLSMRSVSRKILQ 593
           ETLYLT++I+DR+L++++V R+ LQ
Sbjct: 247 ETLYLTINIIDRFLAVKTVPRRELQ 271


>ref|XP_002323225.1| cyclin b [Populus trichocarpa] gi|222867855|gb|EEF04986.1| cyclin b
           [Populus trichocarpa]
          Length = 450

 Score =  183 bits (464), Expect = 2e-44
 Identities = 107/203 (52%), Positives = 127/203 (62%), Gaps = 8/203 (3%)
 Frame = +3

Query: 9   QETVTENNNKKQIVVV--------VDGPIVGKEVAAIRKVALKNVTVRPKPEKVIEISPX 164
           Q      NNKKQ+ V         VDG        A+RK A K VTV+PKPE+V EISP 
Sbjct: 73  QAAAAAENNKKQVCVKAEKVPAAGVDGVAAEARKVAVRKPAQKKVTVKPKPEEVTEISPD 132

Query: 165 XXXXXXXXKSEIRRQSREASSKKKKVHTLTSVLTARSKAACGITNKPKXXXXXXXXXXXX 344
                   K E      E S+KK K  TL+SVLTARSKAACG+ NKPK            
Sbjct: 133 TEEKPGNKKKE-----GEGSTKKNKP-TLSSVLTARSKAACGVANKPKGQVIDIDAADVN 186

Query: 345 NHLAAVDYVEDIYKYYKLAENSS*VHAYMYTQHEINEKMRDILVEWLIEVHNKFELMPET 524
           N LA V+YVEDIYK+YKL EN S  + YM  Q EINEKMR ILV+WLI+V +KFEL PET
Sbjct: 187 NDLAGVEYVEDIYKFYKLVENESRPNDYMDRQPEINEKMRAILVDWLIDVQHKFELSPET 246

Query: 525 LYLTVHIVDRYLSMRSVSRKILQ 593
           LYLT++I+DR+LS+++V RK LQ
Sbjct: 247 LYLTINIIDRFLSVKTVPRKELQ 269


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