BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015163
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...   115   4e-24
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]   112   2e-23
gb|AFK37258.1| unknown [Lotus japonicus]                              102   4e-20
gb|AFK40316.1| unknown [Lotus japonicus]                               99   3e-19
ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III s...    95   5e-18

>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/82 (69%), Positives = 67/82 (81%)
 Frame = +3

Query: 3   PTRVIASVAPSEFQVYDYLVQSAACNQTRESINEFLRCCEKFDLAKAEKINIINIRPSSA 182
           PTRVIA +A SEF+VYDYLV+SAACNQTRESINE L  C+K+DLAKAE +NIINIRP+S 
Sbjct: 29  PTRVIAPIAASEFKVYDYLVESAACNQTRESINELLEKCKKYDLAKAEILNIINIRPASP 88

Query: 183 AEIDSIVENCEQRMGNEDEALV 248
            EID I+E  E+RMG   E L+
Sbjct: 89  VEIDPIIEESEKRMGEGIEDLI 110


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/81 (69%), Positives = 66/81 (81%)
 Frame = +3

Query: 6   TRVIASVAPSEFQVYDYLVQSAACNQTRESINEFLRCCEKFDLAKAEKINIINIRPSSAA 185
           TRVIA +A SEF+VYDYLV+SAACNQTRESINE L  C+K+DLAKAE +NIINIRP+S  
Sbjct: 51  TRVIAPIAASEFKVYDYLVESAACNQTRESINELLEKCKKYDLAKAEILNIINIRPASPV 110

Query: 186 EIDSIVENCEQRMGNEDEALV 248
           EID I+E  E+RMG   E L+
Sbjct: 111 EIDPIIEESEKRMGEGIEDLI 131


>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/78 (64%), Positives = 62/78 (79%)
 Frame = +3

Query: 3   PTRVIASVAPSEFQVYDYLVQSAACNQTRESINEFLRCCEKFDLAKAEKINIINIRPSSA 182
           PTRVIA VA SE++VYDYLV +AA NQTRESINEF+   +K DLAKAE +NIINIRP++A
Sbjct: 29  PTRVIAKVAQSEYKVYDYLVNTAASNQTRESINEFMASVKKHDLAKAEVLNIINIRPAAA 88

Query: 183 AEIDSIVENCEQRMGNED 236
            E+  I+E CE R  +E+
Sbjct: 89  VEMFPIIEECESRFPDEE 106


>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/78 (62%), Positives = 61/78 (78%)
 Frame = +3

Query: 3   PTRVIASVAPSEFQVYDYLVQSAACNQTRESINEFLRCCEKFDLAKAEKINIINIRPSSA 182
           PTRVIA VA SE++VYDYLV +AA NQTRESINEF+   +K DLAKAE +NIINI P++A
Sbjct: 29  PTRVIAKVAQSEYKVYDYLVNTAASNQTRESINEFMASVKKHDLAKAEVLNIINITPAAA 88

Query: 183 AEIDSIVENCEQRMGNED 236
            E+  I+E CE R  +E+
Sbjct: 89  VEMFPIIEECEPRFPDEE 106


>ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
           [Glycine max]
          Length = 161

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/77 (59%), Positives = 61/77 (79%)
 Frame = +3

Query: 3   PTRVIASVAPSEFQVYDYLVQSAACNQTRESINEFLRCCEKFDLAKAEKINIINIRPSSA 182
           PTRVIA VA SE++VYDYLV +AA  QTRESINEFL   ++ DLAKAE +NI+NI P++ 
Sbjct: 29  PTRVIAKVAQSEYKVYDYLVDTAASVQTRESINEFLTSVKQHDLAKAEVLNILNIGPAAE 88

Query: 183 AEIDSIVENCEQRMGNE 233
            E+  I+E+C++R G+E
Sbjct: 89  VELYPIIEDCDERFGDE 105