BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015162
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...    89   4e-16
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]    89   4e-16
gb|AFK37258.1| unknown [Lotus japonicus]                               84   2e-14
ref|XP_002306270.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
gb|AFK40316.1| unknown [Lotus japonicus]                               81   8e-14

>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
 Frame = +1

Query: 1   EVVDFLRSRGASTDSTRVIANVAPTEFQV-----QSAARNQTRESIDEFLTSCIKFDLAK 165
           EV+DFLRSRGA+ D TRVIA +A +EF+V     +SAA NQTRESI+E L  C K+DLAK
Sbjct: 15  EVLDFLRSRGAAKDPTRVIAPIAASEFKVYDYLVESAACNQTRESINELLEKCKKYDLAK 74

Query: 166 ADKLNLINIRLSSAVEIE 219
           A+ LN+INIR +S VEI+
Sbjct: 75  AEILNIINIRPASPVEID 92


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
 Frame = +1

Query: 1   EVVDFLRSRGASTDSTRVIANVAPTEFQV-----QSAARNQTRESIDEFLTSCIKFDLAK 165
           EV+DFLRSRGA+ D TRVIA +A +EF+V     +SAA NQTRESI+E L  C K+DLAK
Sbjct: 36  EVLDFLRSRGAAKDXTRVIAPIAASEFKVYDYLVESAACNQTRESINELLEKCKKYDLAK 95

Query: 166 ADKLNLINIRLSSAVEIE 219
           A+ LN+INIR +S VEI+
Sbjct: 96  AEILNIINIRPASPVEID 113


>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 46/77 (59%), Positives = 59/77 (76%), Gaps = 5/77 (6%)
 Frame = +1

Query: 1   EVVDFLRSRGASTDSTRVIANVAPTEFQV-----QSAARNQTRESIDEFLTSCIKFDLAK 165
           EV+DFLR +GAS D TRVIA VA +E++V      +AA NQTRESI+EF+ S  K DLAK
Sbjct: 15  EVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESINEFMASVKKHDLAK 74

Query: 166 ADKLNLINIRLSSAVEI 216
           A+ LN+INIR ++AVE+
Sbjct: 75  AEVLNIINIRPAAAVEM 91


>ref|XP_002306270.1| predicted protein [Populus trichocarpa] gi|222855719|gb|EEE93266.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
 Frame = +1

Query: 1   EVVDFLRSRGASTDSTRVIANVAPTEFQV-----QSAARNQTRESIDEFLTSCIKFDLAK 165
           EV+DFLRSRGAS D +RV+A VA +E++V     ++ A N TRE I+EFL  C K+DLAK
Sbjct: 15  EVLDFLRSRGASRDVSRVLAPVAASEYKVYDYLVETPACNLTREKINEFLERCKKYDLAK 74

Query: 166 ADKLNLINIRLSSAVEIET 222
           A+ LN+INIR S  VEI T
Sbjct: 75  AELLNIINIRPSQTVEIYT 93


>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/77 (58%), Positives = 58/77 (75%), Gaps = 5/77 (6%)
 Frame = +1

Query: 1   EVVDFLRSRGASTDSTRVIANVAPTEFQV-----QSAARNQTRESIDEFLTSCIKFDLAK 165
           EV+DFLR +GAS D TRVIA VA +E++V      +AA NQTRESI+EF+ S  K DLAK
Sbjct: 15  EVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESINEFMASVKKHDLAK 74

Query: 166 ADKLNLINIRLSSAVEI 216
           A+ LN+INI  ++AVE+
Sbjct: 75  AEVLNIINITPAAAVEM 91