BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015161
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III s...   142   2e-32
emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]   139   2e-31
gb|AFK37258.1| unknown [Lotus japonicus]                              138   4e-31
gb|AFK40316.1| unknown [Lotus japonicus]                              137   1e-30
ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III s...   134   6e-30

>ref|XP_002263648.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC9 [Vitis
           vinifera] gi|296087853|emb|CBI35109.3| unnamed protein
           product [Vitis vinifera]
          Length = 156

 Score =  142 bits (359), Expect = 2e-32
 Identities = 72/106 (67%), Positives = 86/106 (81%)
 Frame = +2

Query: 5   QTNAGALTNFEVLDFLRSRGASTNPTRVIANVAQSEFQVYDYLVQSAACNQTRESINEFL 184
           + NAGALTNFEVLDFLRSRGA+ +PTRVIA +A SEF+VYDYLV+SAACNQTRESINE L
Sbjct: 5   KANAGALTNFEVLDFLRSRGAAKDPTRVIAPIAASEFKVYDYLVESAACNQTRESINELL 64

Query: 185 TSWVKFDPAKAEKLNLINIKPSPAIEIDSIVENCEQRMGNEDEALV 322
               K+D AKAE LN+INI+P+  +EID I+E  E+RMG   E L+
Sbjct: 65  EKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRMGEGIEDLI 110


>emb|CAN72759.1| hypothetical protein VITISV_004802 [Vitis vinifera]
          Length = 388

 Score =  139 bits (351), Expect = 2e-31
 Identities = 71/106 (66%), Positives = 85/106 (80%)
 Frame = +2

Query: 5   QTNAGALTNFEVLDFLRSRGASTNPTRVIANVAQSEFQVYDYLVQSAACNQTRESINEFL 184
           + NAGALTNFEVLDFLRSRGA+ + TRVIA +A SEF+VYDYLV+SAACNQTRESINE L
Sbjct: 26  KANAGALTNFEVLDFLRSRGAAKDXTRVIAPIAASEFKVYDYLVESAACNQTRESINELL 85

Query: 185 TSWVKFDPAKAEKLNLINIKPSPAIEIDSIVENCEQRMGNEDEALV 322
               K+D AKAE LN+INI+P+  +EID I+E  E+RMG   E L+
Sbjct: 86  EKCKKYDLAKAEILNIINIRPASPVEIDPIIEESEKRMGEGIEDLI 131


>gb|AFK37258.1| unknown [Lotus japonicus]
          Length = 162

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/103 (66%), Positives = 84/103 (81%)
 Frame = +2

Query: 2   LQTNAGALTNFEVLDFLRSRGASTNPTRVIANVAQSEFQVYDYLVQSAACNQTRESINEF 181
           L+ NAGALTNFEVLDFLR +GAS +PTRVIA VAQSE++VYDYLV +AA NQTRESINEF
Sbjct: 4   LEANAGALTNFEVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESINEF 63

Query: 182 LTSWVKFDPAKAEKLNLINIKPSPAIEIDSIVENCEQRMGNED 310
           + S  K D AKAE LN+INI+P+ A+E+  I+E CE R  +E+
Sbjct: 64  MASVKKHDLAKAEVLNIINIRPAAAVEMFPIIEECESRFPDEE 106


>gb|AFK40316.1| unknown [Lotus japonicus]
          Length = 162

 Score =  137 bits (344), Expect = 1e-30
 Identities = 69/103 (66%), Positives = 83/103 (80%)
 Frame = +2

Query: 2   LQTNAGALTNFEVLDFLRSRGASTNPTRVIANVAQSEFQVYDYLVQSAACNQTRESINEF 181
           L+ NAGALTNFEVLDFLR +GAS +PTRVIA VAQSE++VYDYLV +AA NQTRESINEF
Sbjct: 4   LEANAGALTNFEVLDFLRGKGASKDPTRVIAKVAQSEYKVYDYLVNTAASNQTRESINEF 63

Query: 182 LTSWVKFDPAKAEKLNLINIKPSPAIEIDSIVENCEQRMGNED 310
           + S  K D AKAE LN+INI P+ A+E+  I+E CE R  +E+
Sbjct: 64  MASVKKHDLAKAEVLNIINITPAAAVEMFPIIEECEPRFPDEE 106


>ref|XP_003552972.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc9-like
           [Glycine max]
          Length = 161

 Score =  134 bits (338), Expect = 6e-30
 Identities = 67/102 (65%), Positives = 85/102 (83%)
 Frame = +2

Query: 2   LQTNAGALTNFEVLDFLRSRGASTNPTRVIANVAQSEFQVYDYLVQSAACNQTRESINEF 181
           L+ NAGALTNFEVLDFLR++GAS +PTRVIA VAQSE++VYDYLV +AA  QTRESINEF
Sbjct: 4   LECNAGALTNFEVLDFLRAKGASKDPTRVIAKVAQSEYKVYDYLVDTAASVQTRESINEF 63

Query: 182 LTSWVKFDPAKAEKLNLINIKPSPAIEIDSIVENCEQRMGNE 307
           LTS  + D AKAE LN++NI P+  +E+  I+E+C++R G+E
Sbjct: 64  LTSVKQHDLAKAEVLNILNIGPAAEVELYPIIEDCDERFGDE 105