BLASTX nr result

ID: Coptis23_contig00015156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015156
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282752.1| PREDICTED: iron-sulfur assembly protein IscA...   202   5e-50
ref|XP_002528740.1| iron-sulfur cluster assembly protein, putati...   200   3e-49
ref|XP_002315435.1| predicted protein [Populus trichocarpa] gi|2...   197   2e-48
ref|XP_003554433.1| PREDICTED: iron-sulfur assembly protein IscA...   197   2e-48
ref|NP_001241965.1| uncharacterized protein LOC100777750 [Glycin...   196   6e-48

>ref|XP_002282752.1| PREDICTED: iron-sulfur assembly protein IscA-like 1, mitochondrial
           [Vitis vinifera] gi|297740107|emb|CBI30289.3| unnamed
           protein product [Vitis vinifera]
          Length = 133

 Score =  202 bits (515), Expect = 5e-50
 Identities = 101/133 (75%), Positives = 111/133 (83%)
 Frame = +2

Query: 149 MASSFLAAAAERTGSAVRRQALSLTDSAATXXXXXXXXXXXXXXXXGVKARGCNGLSYTL 328
           MASSFLAAAA + G ++RRQAL+LTD+AA+                GVKARGCNGLSYTL
Sbjct: 1   MASSFLAAAAAKAGPSLRRQALTLTDAAASRIRHLLQQRQRTFLRLGVKARGCNGLSYTL 60

Query: 329 NYADEKGKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDTLRSEFVFINPNSKGQCGCG 508
           NYAD+KGKFDE+VEDKGVKILIDPKALMHVIGTKMDFVDD LRSEF+FINPNSKGQCGCG
Sbjct: 61  NYADDKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCG 120

Query: 509 ESFMTTNSAGAAK 547
           ESFMTT + GAAK
Sbjct: 121 ESFMTTGNPGAAK 133


>ref|XP_002528740.1| iron-sulfur cluster assembly protein, putative [Ricinus communis]
           gi|223531834|gb|EEF33652.1| iron-sulfur cluster assembly
           protein, putative [Ricinus communis]
          Length = 138

 Score =  200 bits (509), Expect = 3e-49
 Identities = 102/138 (73%), Positives = 111/138 (80%)
 Frame = +2

Query: 149 MASSFLAAAAERTGSAVRRQALSLTDSAATXXXXXXXXXXXXXXXXGVKARGCNGLSYTL 328
           MAS  LAAAAE+ G A RRQAL+LTD+AA+                GVKARGCNGLSYTL
Sbjct: 1   MASKLLAAAAEKIGPAARRQALTLTDAAASRIRHLLQQRQRPFLKLGVKARGCNGLSYTL 60

Query: 329 NYADEKGKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDTLRSEFVFINPNSKGQCGCG 508
           NYADEK KFDE+VE+KGVKILIDPKALMHVIGTKMDFVDD LRSEFVFINPNSKGQCGCG
Sbjct: 61  NYADEKAKFDELVEEKGVKILIDPKALMHVIGTKMDFVDDKLRSEFVFINPNSKGQCGCG 120

Query: 509 ESFMTTNSAGAAKPSGSK 562
           ESFMTT+SAG A+   S+
Sbjct: 121 ESFMTTSSAGDAEQRSSR 138


>ref|XP_002315435.1| predicted protein [Populus trichocarpa] gi|222864475|gb|EEF01606.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  197 bits (502), Expect = 2e-48
 Identities = 100/136 (73%), Positives = 107/136 (78%)
 Frame = +2

Query: 152 ASSFLAAAAERTGSAVRRQALSLTDSAATXXXXXXXXXXXXXXXXGVKARGCNGLSYTLN 331
           AS   AAAAE  GS+ R+Q LSLTD+AAT                GVKARGCNGLSYTLN
Sbjct: 6   ASKLFAAAAEAVGSSARKQVLSLTDAAATRIRDLLQQRKRPFLRLGVKARGCNGLSYTLN 65

Query: 332 YADEKGKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDTLRSEFVFINPNSKGQCGCGE 511
           YADEKGKFDE+VEDKGVKILIDPKALMHVIGTKMDFVDD LRSEF+FINPNSKGQCGCGE
Sbjct: 66  YADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFINPNSKGQCGCGE 125

Query: 512 SFMTTNSAGAAKPSGS 559
           SFMT +S+  AK  GS
Sbjct: 126 SFMTRSSSTTAKGGGS 141


>ref|XP_003554433.1| PREDICTED: iron-sulfur assembly protein IscA-like 1,
           mitochondrial-like [Glycine max]
          Length = 134

 Score =  197 bits (501), Expect = 2e-48
 Identities = 96/134 (71%), Positives = 109/134 (81%)
 Frame = +2

Query: 149 MASSFLAAAAERTGSAVRRQALSLTDSAATXXXXXXXXXXXXXXXXGVKARGCNGLSYTL 328
           MAS  ++ AAE+ G+A RRQA+SLTD+AA+                GVK RGCNGLSYTL
Sbjct: 1   MASKAMSVAAEKIGTAARRQAVSLTDAAASRIRQLLQQRQRAFLKLGVKTRGCNGLSYTL 60

Query: 329 NYADEKGKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDTLRSEFVFINPNSKGQCGCG 508
           NYADEKGKFDE+VEDKGV ILIDPKALMHVIGTKMDFVDD LRSEF+F+NPNSKGQCGCG
Sbjct: 61  NYADEKGKFDELVEDKGVMILIDPKALMHVIGTKMDFVDDKLRSEFIFVNPNSKGQCGCG 120

Query: 509 ESFMTTNSAGAAKP 550
           ESFMTT S+G++KP
Sbjct: 121 ESFMTTGSSGSSKP 134


>ref|NP_001241965.1| uncharacterized protein LOC100777750 [Glycine max]
           gi|255640925|gb|ACU20744.1| unknown [Glycine max]
          Length = 134

 Score =  196 bits (497), Expect = 6e-48
 Identities = 95/134 (70%), Positives = 110/134 (82%)
 Frame = +2

Query: 149 MASSFLAAAAERTGSAVRRQALSLTDSAATXXXXXXXXXXXXXXXXGVKARGCNGLSYTL 328
           MAS  ++ AAE+  +A RRQA+SLTD+AA+                GVKARGCNGLSYTL
Sbjct: 1   MASKAMSVAAEKIATAARRQAVSLTDAAASRIRQLLQQRQRPFLKLGVKARGCNGLSYTL 60

Query: 329 NYADEKGKFDEVVEDKGVKILIDPKALMHVIGTKMDFVDDTLRSEFVFINPNSKGQCGCG 508
           NYA+EKGKFDE+VEDKGVKILIDPKALMHVIGTKMDFVDD L+SEF+F+NPNSKGQCGCG
Sbjct: 61  NYANEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLKSEFIFVNPNSKGQCGCG 120

Query: 509 ESFMTTNSAGAAKP 550
           ESFMTT S+G++KP
Sbjct: 121 ESFMTTGSSGSSKP 134


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