BLASTX nr result

ID: Coptis23_contig00015139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015139
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...   108   4e-44
emb|CBI17106.3| unnamed protein product [Vitis vinifera]              108   4e-44
gb|AFW67327.1| putative argonaute superfamily protein [Zea mays]      101   1e-40
ref|XP_002463728.1| hypothetical protein SORBIDRAFT_01g004920 [S...   101   1e-40
gb|EEC76305.1| hypothetical protein OsI_13832 [Oryza sativa Indi...    98   6e-40

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
           vinifera]
          Length = 1038

 Score =  108 bits (271), Expect(2) = 4e-44
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = +3

Query: 234 IKVKKAVKGLRVELTHRKEEKRNKITGITAQPIEQLMFTVVEDGRRMSVAQYFHDKYDVK 413
           IKVKKA+KG++V+LTHR+  KR KI G+++QP  QLMFT+ ++  R+SV QYF  KY++ 
Sbjct: 411 IKVKKALKGVKVQLTHREFAKRYKIAGVSSQPTNQLMFTLDDEATRVSVVQYFRQKYNIV 470

Query: 414 LRYGHWPALQAGSDSKQAYFPMEV 485
           L+Y  WP+LQAGSDSK  Y PMEV
Sbjct: 471 LKYPSWPSLQAGSDSKPIYLPMEV 494



 Score = 94.4 bits (233), Expect(2) = 4e-44
 Identities = 44/66 (66%), Positives = 54/66 (81%)
 Frame = +2

Query: 2   YTAVGRSFFSMKMGQRTDVGDGLECWRGYYQSLRPTQIGMSLNIDVVAASLYEAIPVIDY 181
           YT VGRSFFS ++G++ ++GDGLE WRGYYQSLRPTQ+G+S NIDV A S YE+I V D+
Sbjct: 332 YTVVGRSFFSTQLGRKGELGDGLEYWRGYYQSLRPTQMGLSFNIDVSARSFYESILVTDF 391

Query: 182 VQKLLK 199
           V K LK
Sbjct: 392 VAKHLK 397


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score =  108 bits (271), Expect(2) = 4e-44
 Identities = 50/84 (59%), Positives = 66/84 (78%)
 Frame = +3

Query: 234 IKVKKAVKGLRVELTHRKEEKRNKITGITAQPIEQLMFTVVEDGRRMSVAQYFHDKYDVK 413
           IKVKKA+KG++V+LTHR+  KR KI G+++QP  QLMFT+ ++  R+SV QYF  KY++ 
Sbjct: 405 IKVKKALKGVKVQLTHREFAKRYKIAGVSSQPTNQLMFTLDDEATRVSVVQYFRQKYNIV 464

Query: 414 LRYGHWPALQAGSDSKQAYFPMEV 485
           L+Y  WP+LQAGSDSK  Y PMEV
Sbjct: 465 LKYPSWPSLQAGSDSKPIYLPMEV 488



 Score = 94.4 bits (233), Expect(2) = 4e-44
 Identities = 44/66 (66%), Positives = 54/66 (81%)
 Frame = +2

Query: 2   YTAVGRSFFSMKMGQRTDVGDGLECWRGYYQSLRPTQIGMSLNIDVVAASLYEAIPVIDY 181
           YT VGRSFFS ++G++ ++GDGLE WRGYYQSLRPTQ+G+S NIDV A S YE+I V D+
Sbjct: 326 YTVVGRSFFSTQLGRKGELGDGLEYWRGYYQSLRPTQMGLSFNIDVSARSFYESILVTDF 385

Query: 182 VQKLLK 199
           V K LK
Sbjct: 386 VAKHLK 391


>gb|AFW67327.1| putative argonaute superfamily protein [Zea mays]
          Length = 941

 Score =  101 bits (252), Expect(2) = 1e-40
 Identities = 47/85 (55%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = +3

Query: 234 IKVKKAVKGLRVELTHRKEE-KRNKITGITAQPIEQLMFTVVEDGRRMSVAQYFHDKYDV 410
           +K+KKA++G+R+E TH++++ +R KITGIT  P+ QL+F V + G R +V QYF DKYD 
Sbjct: 398 VKIKKALRGVRIETTHQQDQIRRYKITGITPIPMSQLIFPVDDKGTRKTVVQYFLDKYDY 457

Query: 411 KLRYGHWPALQAGSDSKQAYFPMEV 485
           +L+Y  WP LQAGSDS+  Y PMEV
Sbjct: 458 RLKYVSWPCLQAGSDSRPVYLPMEV 482



 Score = 90.1 bits (222), Expect(2) = 1e-40
 Identities = 38/65 (58%), Positives = 50/65 (76%)
 Frame = +2

Query: 2   YTAVGRSFFSMKMGQRTDVGDGLECWRGYYQSLRPTQIGMSLNIDVVAASLYEAIPVIDY 181
           Y  V RSFFS   G R D+G+GLECWRGYYQSLRPTQ+G+SLNID+ A S ++ + +I +
Sbjct: 319 YVTVSRSFFSTTFGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTIIKF 378

Query: 182 VQKLL 196
           V++ L
Sbjct: 379 VEEFL 383


>ref|XP_002463728.1| hypothetical protein SORBIDRAFT_01g004920 [Sorghum bicolor]
           gi|241917582|gb|EER90726.1| hypothetical protein
           SORBIDRAFT_01g004920 [Sorghum bicolor]
          Length = 1067

 Score =  101 bits (251), Expect(2) = 1e-40
 Identities = 45/85 (52%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
 Frame = +3

Query: 234 IKVKKAVKGLRVELTHRKEE-KRNKITGITAQPIEQLMFTVVEDGRRMSVAQYFHDKYDV 410
           +K+KKA++G+R+E TH++++ +R KITG+T+ P+ QL+F V + G R +V QYF DKY+ 
Sbjct: 437 VKIKKALRGVRIETTHQQDQIRRYKITGVTSIPMSQLIFPVDDKGTRKTVVQYFWDKYNY 496

Query: 411 KLRYGHWPALQAGSDSKQAYFPMEV 485
            L++G WP LQAGSDS+  Y PMEV
Sbjct: 497 SLKHGSWPCLQAGSDSRPVYLPMEV 521



 Score = 90.1 bits (222), Expect(2) = 1e-40
 Identities = 39/65 (60%), Positives = 50/65 (76%)
 Frame = +2

Query: 2   YTAVGRSFFSMKMGQRTDVGDGLECWRGYYQSLRPTQIGMSLNIDVVAASLYEAIPVIDY 181
           Y  V RSFFS   G R D+G+GLECWRGYYQSLRPTQ+G+SLNID+ A S ++ + VI +
Sbjct: 358 YVTVSRSFFSTTFGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVSVIKF 417

Query: 182 VQKLL 196
           V++ L
Sbjct: 418 VEEYL 422


>gb|EEC76305.1| hypothetical protein OsI_13832 [Oryza sativa Indica Group]
          Length = 1299

 Score = 97.8 bits (242), Expect(2) = 6e-40
 Identities = 43/85 (50%), Positives = 65/85 (76%), Gaps = 1/85 (1%)
 Frame = +3

Query: 234 IKVKKAVKGLRVELTHRKEE-KRNKITGITAQPIEQLMFTVVEDGRRMSVAQYFHDKYDV 410
           +K+KKA++G+R+E  H++++ +R KITGIT  P+ QL+F V ++G R +V QYF D+Y+ 
Sbjct: 336 VKIKKALRGVRIETNHQEDQIRRYKITGITPIPMSQLIFPVDDNGTRKTVVQYFWDRYNY 395

Query: 411 KLRYGHWPALQAGSDSKQAYFPMEV 485
           +L+Y  WP LQ+GSDS+  Y PMEV
Sbjct: 396 RLKYASWPCLQSGSDSRPVYLPMEV 420



 Score = 91.7 bits (226), Expect(2) = 6e-40
 Identities = 39/65 (60%), Positives = 51/65 (78%)
 Frame = +2

Query: 2   YTAVGRSFFSMKMGQRTDVGDGLECWRGYYQSLRPTQIGMSLNIDVVAASLYEAIPVIDY 181
           Y  V RSFFS + G R D+G+GLECWRGYYQSLRPTQ+G+SLNID+ A S ++ + VI +
Sbjct: 257 YVTVSRSFFSTQFGHRGDIGEGLECWRGYYQSLRPTQMGLSLNIDISATSFFKPVTVIQF 316

Query: 182 VQKLL 196
           V++ L
Sbjct: 317 VEEFL 321


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