BLASTX nr result

ID: Coptis23_contig00015121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015121
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527215.1| DNA binding protein, putative [Ricinus commu...    90   3e-20
ref|XP_003517161.1| PREDICTED: uncharacterized protein LOC100810...    89   1e-19
ref|XP_003534259.1| PREDICTED: uncharacterized protein LOC100782...    85   3e-18
ref|XP_003612947.1| Glycine-rich protein [Medicago truncatula] g...    87   7e-18
ref|XP_004164454.1| PREDICTED: uncharacterized protein LOC101228...    89   2e-17

>ref|XP_002527215.1| DNA binding protein, putative [Ricinus communis]
           gi|223533391|gb|EEF35141.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 871

 Score = 89.7 bits (221), Expect(2) = 3e-20
 Identities = 40/54 (74%), Positives = 46/54 (85%)
 Frame = -2

Query: 453 PVSYCKDLVEVLGEILEHDDTISDRTKGQKLDTGFSGTTMQWENTFGSRY*ESG 292
           P+SYCKDL E LG+ILEHDD  SDRTKG+KLD GFSGTT QWE TFG+RY ++G
Sbjct: 231 PISYCKDLSEALGKILEHDDMDSDRTKGKKLDVGFSGTTKQWEETFGTRYWKAG 284



 Score = 33.5 bits (75), Expect(2) = 3e-20
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -1

Query: 301 RVGGMYRGVAPSPVTVIPLLSKIEXXXXXXXXXXXXXXXLPKMKAVEVSLK 149
           + G MYRG  PSP+T+  LL  I                LP++K VEV L+
Sbjct: 282 KAGAMYRGSGPSPLTITSLLPNILRKDVLAPNEIQKIIQLPEVKIVEVLLE 332


>ref|XP_003517161.1| PREDICTED: uncharacterized protein LOC100810300 [Glycine max]
          Length = 852

 Score = 89.0 bits (219), Expect(2) = 1e-19
 Identities = 40/54 (74%), Positives = 47/54 (87%)
 Frame = -2

Query: 453 PVSYCKDLVEVLGEILEHDDTISDRTKGQKLDTGFSGTTMQWENTFGSRY*ESG 292
           PV+YCKDL E LG++LEHDDT SDRTKG+KLD GFSGTT QWE TFG+RY ++G
Sbjct: 232 PVAYCKDLNEALGKVLEHDDTDSDRTKGKKLDLGFSGTTRQWEVTFGTRYWKAG 285



 Score = 32.0 bits (71), Expect(2) = 1e-19
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -1

Query: 301 RVGGMYRGVAPSPVTVIPLLSKIEXXXXXXXXXXXXXXXLPKMKAVEVSLK 149
           + G MYRG APSP+T  P  S I                LP  K +EV L+
Sbjct: 283 KAGAMYRGNAPSPITSNPFPSSITCKKVVSSNEYPQEISLPDRKVMEVLLE 333


>ref|XP_003534259.1| PREDICTED: uncharacterized protein LOC100782361 [Glycine max]
          Length = 827

 Score = 84.7 bits (208), Expect(2) = 3e-18
 Identities = 39/54 (72%), Positives = 46/54 (85%)
 Frame = -2

Query: 453 PVSYCKDLVEVLGEILEHDDTISDRTKGQKLDTGFSGTTMQWENTFGSRY*ESG 292
           PV+Y KDL E LG++LEHDDT SDRTKG+KLD GFSGTT QWE TFG+RY ++G
Sbjct: 232 PVAYGKDLNEALGKVLEHDDTDSDRTKGKKLDVGFSGTTKQWEVTFGTRYWKAG 285



 Score = 31.6 bits (70), Expect(2) = 3e-18
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -1

Query: 301 RVGGMYRGVAPSPVTVIPLLSKIEXXXXXXXXXXXXXXXLPKMKAVEVSLK 149
           + G MYRG APSP+T  P  S I                LP  K +EV L+
Sbjct: 283 KAGAMYRGNAPSPITSNPFSSSIICKKVVSSNEYPQEVLLPDRKVMEVFLE 333


>ref|XP_003612947.1| Glycine-rich protein [Medicago truncatula]
           gi|163889366|gb|ABY48136.1| glycine-rich protein
           [Medicago truncatula] gi|355514282|gb|AES95905.1|
           Glycine-rich protein [Medicago truncatula]
          Length = 897

 Score = 87.4 bits (215), Expect(2) = 7e-18
 Identities = 40/54 (74%), Positives = 47/54 (87%)
 Frame = -2

Query: 453 PVSYCKDLVEVLGEILEHDDTISDRTKGQKLDTGFSGTTMQWENTFGSRY*ESG 292
           PV+Y KDL E LG+ILEHDDT SDRTKG+KLD GFSGTT QWE+TFG+RY ++G
Sbjct: 232 PVAYSKDLNEALGKILEHDDTDSDRTKGKKLDVGFSGTTKQWEDTFGTRYWKAG 285



 Score = 27.7 bits (60), Expect(2) = 7e-18
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 301 RVGGMYRGVAPSPVTVIPLLS 239
           + G MY+G APSP+T  P  S
Sbjct: 283 KAGAMYKGNAPSPITSSPFSS 303


>ref|XP_004164454.1| PREDICTED: uncharacterized protein LOC101228427 [Cucumis sativus]
          Length = 853

 Score = 89.4 bits (220), Expect(2) = 2e-17
 Identities = 39/54 (72%), Positives = 47/54 (87%)
 Frame = -2

Query: 453 PVSYCKDLVEVLGEILEHDDTISDRTKGQKLDTGFSGTTMQWENTFGSRY*ESG 292
           P+SYCKDL ++LG +LEHDDT SDRTKG+KLD GFSGTT QWE+TFG+RY  +G
Sbjct: 232 PLSYCKDLKKILGVVLEHDDTDSDRTKGKKLDNGFSGTTKQWEDTFGTRYWRAG 285



 Score = 24.6 bits (52), Expect(2) = 2e-17
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 301 RVGGMYRGVAPSPVTVIP 248
           R G MYRG  PSP+ + P
Sbjct: 283 RAGVMYRGHCPSPLVLNP 300


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