BLASTX nr result

ID: Coptis23_contig00015115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015115
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262850.2| PREDICTED: uncharacterized protein LOC100248...    75   1e-26
emb|CBI35103.3| unnamed protein product [Vitis vinifera]               75   1e-26
ref|XP_002873288.1| hypothetical protein ARALYDRAFT_487516 [Arab...    74   1e-24
dbj|BAB11155.1| unnamed protein product [Arabidopsis thaliana]         73   2e-24
ref|NP_196314.2| uncharacterized protein [Arabidopsis thaliana] ...    73   2e-24

>ref|XP_002262850.2| PREDICTED: uncharacterized protein LOC100248009 [Vitis vinifera]
          Length = 1126

 Score = 75.5 bits (184), Expect(2) = 1e-26
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = -2

Query: 330  DINAAIDGICEFTGTKIIFWDLREAFIDNLYKPSVSQSRME 208
            DINAAID ICE+TGTK+IFWDLRE FIDNLYKP+V+ SR+E
Sbjct: 931  DINAAIDRICEYTGTKVIFWDLREPFIDNLYKPNVTHSRLE 971



 Score = 69.3 bits (168), Expect(2) = 1e-26
 Identities = 32/40 (80%), Positives = 37/40 (92%)
 Frame = -3

Query: 125  LCDIIVEPLRDHIVTGLLQASMEGLLRVLLDGGSSRLFLP 6
            LCDIIVEPLRD IVTGLLQA+++GLLRV+LDGG SR+F P
Sbjct: 984  LCDIIVEPLRDRIVTGLLQAALDGLLRVILDGGPSRVFFP 1023


>emb|CBI35103.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score = 75.5 bits (184), Expect(2) = 1e-26
 Identities = 33/41 (80%), Positives = 38/41 (92%)
 Frame = -2

Query: 330  DINAAIDGICEFTGTKIIFWDLREAFIDNLYKPSVSQSRME 208
            DINAAID ICE+TGTK+IFWDLRE FIDNLYKP+V+ SR+E
Sbjct: 884  DINAAIDRICEYTGTKVIFWDLREPFIDNLYKPNVTHSRLE 924



 Score = 69.3 bits (168), Expect(2) = 1e-26
 Identities = 32/40 (80%), Positives = 37/40 (92%)
 Frame = -3

Query: 125  LCDIIVEPLRDHIVTGLLQASMEGLLRVLLDGGSSRLFLP 6
            LCDIIVEPLRD IVTGLLQA+++GLLRV+LDGG SR+F P
Sbjct: 937  LCDIIVEPLRDRIVTGLLQAALDGLLRVILDGGPSRVFFP 976


>ref|XP_002873288.1| hypothetical protein ARALYDRAFT_487516 [Arabidopsis lyrata subsp.
            lyrata] gi|297319125|gb|EFH49547.1| hypothetical protein
            ARALYDRAFT_487516 [Arabidopsis lyrata subsp. lyrata]
          Length = 1101

 Score = 73.9 bits (180), Expect(2) = 1e-24
 Identities = 35/41 (85%), Positives = 38/41 (92%)
 Frame = -2

Query: 330  DINAAIDGICEFTGTKIIFWDLREAFIDNLYKPSVSQSRME 208
            DINAA+D ICEFTGTKIIF DLRE FI+NLYKPSVSQSR+E
Sbjct: 905  DINAALDRICEFTGTKIIFCDLREPFIENLYKPSVSQSRLE 945



 Score = 63.9 bits (154), Expect(2) = 1e-24
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = -3

Query: 125  LCDIIVEPLRDHIVTGLLQASMEGLLRVLLDGGSSRLFLP 6
            LC +I+EPLRD IVT LLQAS++GLLRVLLDGG SR+F P
Sbjct: 958  LCSVIMEPLRDRIVTSLLQASLDGLLRVLLDGGPSRVFHP 997


>dbj|BAB11155.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1105

 Score = 72.8 bits (177), Expect(2) = 2e-24
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = -2

Query: 330  DINAAIDGICEFTGTKIIFWDLREAFIDNLYKPSVSQSRME 208
            DINAA+D ICEFTGTKIIF DLRE FI+NLYKP+VSQSR+E
Sbjct: 909  DINAALDRICEFTGTKIIFCDLREPFIENLYKPNVSQSRLE 949



 Score = 64.7 bits (156), Expect(2) = 2e-24
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = -3

Query: 125  LCDIIVEPLRDHIVTGLLQASMEGLLRVLLDGGSSRLFLP 6
            LC +I+EPLRD IVT LLQAS++GLLRVLLDGG+SR+F P
Sbjct: 962  LCSVIMEPLRDRIVTSLLQASLDGLLRVLLDGGASRVFHP 1001


>ref|NP_196314.2| uncharacterized protein [Arabidopsis thaliana]
            gi|19699369|gb|AAL91294.1| AT5g06970/MOJ9_14 [Arabidopsis
            thaliana] gi|27363442|gb|AAO11640.1| At5g06970/MOJ9_14
            [Arabidopsis thaliana] gi|332003708|gb|AED91091.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 1101

 Score = 72.8 bits (177), Expect(2) = 2e-24
 Identities = 34/41 (82%), Positives = 38/41 (92%)
 Frame = -2

Query: 330  DINAAIDGICEFTGTKIIFWDLREAFIDNLYKPSVSQSRME 208
            DINAA+D ICEFTGTKIIF DLRE FI+NLYKP+VSQSR+E
Sbjct: 905  DINAALDRICEFTGTKIIFCDLREPFIENLYKPNVSQSRLE 945



 Score = 64.7 bits (156), Expect(2) = 2e-24
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = -3

Query: 125  LCDIIVEPLRDHIVTGLLQASMEGLLRVLLDGGSSRLFLP 6
            LC +I+EPLRD IVT LLQAS++GLLRVLLDGG+SR+F P
Sbjct: 958  LCSVIMEPLRDRIVTSLLQASLDGLLRVLLDGGASRVFHP 997


Top