BLASTX nr result

ID: Coptis23_contig00015112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015112
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30474.3| unnamed protein product [Vitis vinifera]              225   1e-56
ref|XP_002272737.1| PREDICTED: probable peptide/nitrate transpor...   225   1e-56
emb|CAN73408.1| hypothetical protein VITISV_024373 [Vitis vinifera]   225   1e-56
ref|XP_002323528.1| predicted protein [Populus trichocarpa] gi|2...   225   1e-56
ref|XP_002309091.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56

>emb|CBI30474.3| unnamed protein product [Vitis vinifera]
          Length = 406

 Score =  225 bits (574), Expect = 1e-56
 Identities = 109/165 (66%), Positives = 138/165 (83%), Gaps = 3/165 (1%)
 Frame = -1

Query: 595 IPTRASTGVWKAALFIIVIEFIERLCYFGISTNLITYLTKVIRQDIKNAVRSVNYWVGMT 416
           +P RASTGVWKA+LFII IEF ERL YFGI+T+LI YL+KV+ +D+K+A +SVNYW G+T
Sbjct: 26  LPLRASTGVWKASLFIIAIEFSERLSYFGIATSLILYLSKVMHEDLKSAAKSVNYWSGVT 85

Query: 415 T---IIGGFLADSYLGRFNMVLLSSSIYVVGLCLLTMSQLIPSLQPSHVKTGDRAQGIHE 245
           T   ++GGFLAD+Y GRF+ VL+SS +Y++GL LLTMS+++PSL+P    T    + +HE
Sbjct: 86  TTMPLLGGFLADAYWGRFSTVLISSIVYLLGLILLTMSRVVPSLRPCGAGTCLEPRKVHE 145

Query: 244 VVFFLAIYLVFVATGGHKPALESFGADQFDDNHPEERKKKMSYFN 110
           VVFFLAIYL+ + TGGHKPALESFGADQFDD++ EERKKKMSYFN
Sbjct: 146 VVFFLAIYLISIGTGGHKPALESFGADQFDDDYSEERKKKMSYFN 190


>ref|XP_002272737.1| PREDICTED: probable peptide/nitrate transporter At3g53960 [Vitis
           vinifera]
          Length = 534

 Score =  225 bits (574), Expect = 1e-56
 Identities = 109/165 (66%), Positives = 138/165 (83%), Gaps = 3/165 (1%)
 Frame = -1

Query: 595 IPTRASTGVWKAALFIIVIEFIERLCYFGISTNLITYLTKVIRQDIKNAVRSVNYWVGMT 416
           +P RASTGVWKA+LFII IEF ERL YFGI+T+LI YL+KV+ +D+K+A +SVNYW G+T
Sbjct: 26  LPLRASTGVWKASLFIIAIEFSERLSYFGIATSLILYLSKVMHEDLKSAAKSVNYWSGVT 85

Query: 415 T---IIGGFLADSYLGRFNMVLLSSSIYVVGLCLLTMSQLIPSLQPSHVKTGDRAQGIHE 245
           T   ++GGFLAD+Y GRF+ VL+SS +Y++GL LLTMS+++PSL+P    T    + +HE
Sbjct: 86  TTMPLLGGFLADAYWGRFSTVLISSIVYLLGLILLTMSRVVPSLRPCGAGTCLEPRKVHE 145

Query: 244 VVFFLAIYLVFVATGGHKPALESFGADQFDDNHPEERKKKMSYFN 110
           VVFFLAIYL+ + TGGHKPALESFGADQFDD++ EERKKKMSYFN
Sbjct: 146 VVFFLAIYLISIGTGGHKPALESFGADQFDDDYSEERKKKMSYFN 190


>emb|CAN73408.1| hypothetical protein VITISV_024373 [Vitis vinifera]
          Length = 531

 Score =  225 bits (574), Expect = 1e-56
 Identities = 109/165 (66%), Positives = 138/165 (83%), Gaps = 3/165 (1%)
 Frame = -1

Query: 595 IPTRASTGVWKAALFIIVIEFIERLCYFGISTNLITYLTKVIRQDIKNAVRSVNYWVGMT 416
           +P RASTGVWKA+LFII IEF ERL YFGI+T+LI YL+KV+ +D+K+A +SVNYW G+T
Sbjct: 26  LPLRASTGVWKASLFIIAIEFSERLSYFGIATSLILYLSKVMHEDLKSAAKSVNYWSGVT 85

Query: 415 T---IIGGFLADSYLGRFNMVLLSSSIYVVGLCLLTMSQLIPSLQPSHVKTGDRAQGIHE 245
           T   ++GGFLAD+Y GRF+ VL+SS +Y++GL LLTMS+++PSL+P    T    + +HE
Sbjct: 86  TTMPLLGGFLADAYWGRFSTVLISSIVYLLGLILLTMSRVVPSLRPCGAGTCLEPRKVHE 145

Query: 244 VVFFLAIYLVFVATGGHKPALESFGADQFDDNHPEERKKKMSYFN 110
           VVFFLAIYL+ + TGGHKPALESFGADQFDD++ EERKKKMSYFN
Sbjct: 146 VVFFLAIYLISIGTGGHKPALESFGADQFDDDYSEERKKKMSYFN 190


>ref|XP_002323528.1| predicted protein [Populus trichocarpa] gi|222868158|gb|EEF05289.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  225 bits (573), Expect = 1e-56
 Identities = 109/174 (62%), Positives = 135/174 (77%), Gaps = 3/174 (1%)
 Frame = -1

Query: 595 IPTRASTGVWKAALFIIVIEFIERLCYFGISTNLITYLTKVIRQDIKNAVRSVNYWVGMT 416
           +P RASTGVWKA LFIIVIEF ERL YFG++T+LI YLTKVI QD+K A R+VNYW G+T
Sbjct: 29  VPLRASTGVWKATLFIIVIEFSERLSYFGVATSLIIYLTKVIHQDLKTAARNVNYWAGVT 88

Query: 415 TII---GGFLADSYLGRFNMVLLSSSIYVVGLCLLTMSQLIPSLQPSHVKTGDRAQGIHE 245
           T++   GGFLAD+Y GRF  V LSS +Y++GL LLTMS  +PSL+          + +HE
Sbjct: 89  TLMPLFGGFLADAYFGRFTTVFLSSVVYLLGLILLTMSTFVPSLKACDAAVCLEPRKVHE 148

Query: 244 VVFFLAIYLVFVATGGHKPALESFGADQFDDNHPEERKKKMSYFN*ISW*TLCG 83
           +VFF+AIY++ + TGGHKP+LESFGADQFD+NH EERKKKMSYFN  ++   CG
Sbjct: 149 MVFFIAIYMISIGTGGHKPSLESFGADQFDENHSEERKKKMSYFNWWNFGLCCG 202


>ref|XP_002309091.1| predicted protein [Populus trichocarpa] gi|222855067|gb|EEE92614.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  224 bits (572), Expect = 2e-56
 Identities = 110/174 (63%), Positives = 136/174 (78%), Gaps = 3/174 (1%)
 Frame = -1

Query: 595 IPTRASTGVWKAALFIIVIEFIERLCYFGISTNLITYLTKVIRQDIKNAVRSVNYWVGMT 416
           +P RASTG WKA+LFII IEF ERL YFGI+T+LI YL+KV+ QD+K A RSVNYW G+T
Sbjct: 29  VPLRASTGAWKASLFIIAIEFSERLSYFGIATSLIIYLSKVMHQDLKTAARSVNYWGGVT 88

Query: 415 TII---GGFLADSYLGRFNMVLLSSSIYVVGLCLLTMSQLIPSLQPSHVKTGDRAQGIHE 245
           T++   GGFLAD+YLGRF  V +SS +Y++GL LLTMS  +PSL+        + + +HE
Sbjct: 89  TLMPLFGGFLADAYLGRFTTVFVSSIVYLLGLILLTMSAFVPSLKACEAAVCPKPRKVHE 148

Query: 244 VVFFLAIYLVFVATGGHKPALESFGADQFDDNHPEERKKKMSYFN*ISW*TLCG 83
           VVFFLAIYL+ V TGGHKP+LESFGADQFD+NH +ERKKKMSYFN  ++   CG
Sbjct: 149 VVFFLAIYLISVGTGGHKPSLESFGADQFDENHDDERKKKMSYFNWWNFGLCCG 202


Top