BLASTX nr result

ID: Coptis23_contig00015109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015109
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280844.1| PREDICTED: transmembrane protein 87B [Vitis ...   144   7e-33
ref|XP_003615412.1| Transmembrane protein 87B [Medicago truncatu...   135   3e-30
dbj|BAJ94253.1| predicted protein [Hordeum vulgare subsp. vulgar...   134   6e-30
ref|XP_003557969.1| PREDICTED: transmembrane protein 87B-like [B...   134   8e-30
gb|EEC75201.1| hypothetical protein OsI_11451 [Oryza sativa Indi...   133   1e-29

>ref|XP_002280844.1| PREDICTED: transmembrane protein 87B [Vitis vinifera]
           gi|297736477|emb|CBI25348.3| unnamed protein product
           [Vitis vinifera]
          Length = 524

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/106 (65%), Positives = 84/106 (79%)
 Frame = +2

Query: 32  PAATSEDNNNSYNGKSFIRFESVTFRRTNESTVKVNPIQTHTGLVEAIIVEVRDRGRIGG 211
           P   SED     NGKSFIRFES+TFRRT E+T K N +Q  TGL+EAIIVEV+DRGRIGG
Sbjct: 60  PHPNSEDK--PLNGKSFIRFESITFRRTKETTEKQNEMQQKTGLIEAIIVEVKDRGRIGG 117

Query: 212 SFVNSDTLCCSPEIAKTKSCKTGEVIIHQNPDNSEWPKRIQTFFEG 349
           S+ N+D +CC+P++A+  SCK GEVII Q+P+N +WPKRIQT FEG
Sbjct: 118 SYENTDVICCNPKLAEQGSCKVGEVIIRQDPNNPDWPKRIQTSFEG 163


>ref|XP_003615412.1| Transmembrane protein 87B [Medicago truncatula]
           gi|355516747|gb|AES98370.1| Transmembrane protein 87B
           [Medicago truncatula]
          Length = 541

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/108 (59%), Positives = 79/108 (73%)
 Frame = +2

Query: 26  NKPAATSEDNNNSYNGKSFIRFESVTFRRTNESTVKVNPIQTHTGLVEAIIVEVRDRGRI 205
           +KP   +   +N   GKSFIRFES+ FRRT ES  K + +Q  TGLVEAII++VRDR  I
Sbjct: 68  SKPIEFNHSLDNFPTGKSFIRFESINFRRTKESAAKASSMQQKTGLVEAIIIKVRDRNNI 127

Query: 206 GGSFVNSDTLCCSPEIAKTKSCKTGEVIIHQNPDNSEWPKRIQTFFEG 349
           GG ++NSD +CC+PE+AK  SCK GEVII +NPD    PKR+QTFFEG
Sbjct: 128 GGVYLNSDAICCTPELAKEGSCKLGEVIIRENPDEPNGPKRLQTFFEG 175


>dbj|BAJ94253.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326515472|dbj|BAK06982.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 501

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/102 (62%), Positives = 80/102 (78%)
 Frame = +2

Query: 44  SEDNNNSYNGKSFIRFESVTFRRTNESTVKVNPIQTHTGLVEAIIVEVRDRGRIGGSFVN 223
           SE ++NS N  SFIRF+ VTFRR  ES  +   +Q  TGLVEAIIVE++DR +IGGS+++
Sbjct: 59  SESSSNSSN--SFIRFDIVTFRRPQESAARHEEMQQKTGLVEAIIVEIQDRDKIGGSYLH 116

Query: 224 SDTLCCSPEIAKTKSCKTGEVIIHQNPDNSEWPKRIQTFFEG 349
           SD +CC+PE+ K KSCK GEVII  NPDN +WPKRIQTFF+G
Sbjct: 117 SDAICCTPELDKEKSCKVGEVIIRPNPDNPDWPKRIQTFFDG 158


>ref|XP_003557969.1| PREDICTED: transmembrane protein 87B-like [Brachypodium distachyon]
          Length = 501

 Score =  134 bits (337), Expect = 8e-30
 Identities = 63/102 (61%), Positives = 81/102 (79%)
 Frame = +2

Query: 44  SEDNNNSYNGKSFIRFESVTFRRTNESTVKVNPIQTHTGLVEAIIVEVRDRGRIGGSFVN 223
           SE ++NS    SFIRF++VTFRR+ ES  +   +Q  TGLVEAIIVE++DR +IGG++++
Sbjct: 59  SEPSSNS--SASFIRFDTVTFRRSQESAARHEEMQQKTGLVEAIIVEIQDRDKIGGAYLH 116

Query: 224 SDTLCCSPEIAKTKSCKTGEVIIHQNPDNSEWPKRIQTFFEG 349
           SD +CC+PE+ K KSCK GEVII  NPDN +WPKRIQTFFEG
Sbjct: 117 SDAICCTPELDKEKSCKVGEVIIRPNPDNPDWPKRIQTFFEG 158


>gb|EEC75201.1| hypothetical protein OsI_11451 [Oryza sativa Indica Group]
           gi|222624879|gb|EEE59011.1| hypothetical protein
           OsJ_10744 [Oryza sativa Japonica Group]
          Length = 482

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/96 (63%), Positives = 76/96 (79%)
 Frame = +2

Query: 62  SYNGKSFIRFESVTFRRTNESTVKVNPIQTHTGLVEAIIVEVRDRGRIGGSFVNSDTLCC 241
           S +  SFIRF+SVTFRRT ES  +   +Q  TGLVEAIIVE++DR +IGGS+++SD +CC
Sbjct: 56  SNSSASFIRFDSVTFRRTQESAGRHEAMQQKTGLVEAIIVEIQDRSKIGGSYLHSDAICC 115

Query: 242 SPEIAKTKSCKTGEVIIHQNPDNSEWPKRIQTFFEG 349
           +PE+ K KSCK GEVII  NPDN +WPKR+QTFF G
Sbjct: 116 TPELDKEKSCKVGEVIIQPNPDNPDWPKRVQTFFSG 151


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