BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015105
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305655.1| f-box family protein [Populus trichocarpa] g...    88   6e-16
gb|ADO00336.1| F-box protein [Elaeis guineensis]                       86   3e-15
ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis ...    79   3e-13
emb|CBI23311.3| unnamed protein product [Vitis vinifera]               79   3e-13

>ref|XP_002305655.1| f-box family protein [Populus trichocarpa]
           gi|222848619|gb|EEE86166.1| f-box family protein
           [Populus trichocarpa]
          Length = 189

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 52/88 (59%), Positives = 64/88 (72%), Gaps = 6/88 (6%)
 Frame = +3

Query: 3   HDDLKQLFKVSKTVKEAALIAKRDHFAYSTPSKTV-FRRFGDME-----IEDEAPNAPKQ 164
           HDDLKQLF VSK ++EA LIAK  HFAYSTP K+  FR   D+E      E EAPNAPKQ
Sbjct: 96  HDDLKQLFHVSKVIREATLIAKESHFAYSTPRKSQGFRSPFDLENPGELDEIEAPNAPKQ 155

Query: 165 DRKNYRKSRIDGKKLGDITVALFHSPEK 248
            R++Y KSR++ K + D++VALF SP+K
Sbjct: 156 -RRSY-KSRLNRKSIADVSVALFASPKK 181


>gb|ADO00336.1| F-box protein [Elaeis guineensis]
          Length = 178

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 52/87 (59%), Positives = 57/87 (65%), Gaps = 6/87 (6%)
 Frame = +3

Query: 3   HDDLKQLFKVSKTVKEAALIAKRDHFAYSTP-SKTVFRRFG-----DMEIEDEAPNAPKQ 164
           H DLKQL  VSK V  A LIAK  HFA+STP SK  FRR G     D+E+ +EAPNAPKQ
Sbjct: 82  HSDLKQLILVSKIVHGATLIAKEMHFAFSTPSSKPTFRREGNMGDIDLEVSEEAPNAPKQ 141

Query: 165 DRKNYRKSRIDGKKLGDITVALFHSPE 245
            R    KSR+ GK L  I VALF SPE
Sbjct: 142 RR--VAKSRLGGKTLSSIAVALFTSPE 166


>ref|XP_002316660.1| predicted protein [Populus trichocarpa] gi|222859725|gb|EEE97272.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 6/88 (6%)
 Frame = +3

Query: 3   HDDLKQLFKVSKTVKEAALIAKRDHFAYSTPSKT-VFRR---FGDME--IEDEAPNAPKQ 164
           HDDLKQLF VSK ++EA LIAK  HFAYSTP KT  FR    FG+     E EAPNAPKQ
Sbjct: 96  HDDLKQLFHVSKVIREATLIAKEWHFAYSTPRKTQAFRTRIDFGNPSGLDEIEAPNAPKQ 155

Query: 165 DRKNYRKSRIDGKKLGDITVALFHSPEK 248
            R++Y KS ++ K + D++VALF SP+K
Sbjct: 156 -RRSY-KSLLNRKSIADVSVALFASPKK 181


>ref|XP_003634996.1| PREDICTED: F-box protein SKIP27-like [Vitis vinifera]
          Length = 172

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 6/88 (6%)
 Frame = +3

Query: 3   HDDLKQLFKVSKTVKEAALIAKRDHFAYSTPSKT-VFRRFGDMEIED-----EAPNAPKQ 164
           HDDLKQLF VS T+++A LIAK+ HFAYSTPSK   FR   D E        + P+APKQ
Sbjct: 87  HDDLKQLFHVSNTIRDATLIAKKSHFAYSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQ 146

Query: 165 DRKNYRKSRIDGKKLGDITVALFHSPEK 248
            R  + +SR+ G+KL  I +ALF S E+
Sbjct: 147 SR--HFRSRLRGRKLSGIAIALFSSDEE 172


>emb|CBI23311.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 46/88 (52%), Positives = 58/88 (65%), Gaps = 6/88 (6%)
 Frame = +3

Query: 3   HDDLKQLFKVSKTVKEAALIAKRDHFAYSTPSKT-VFRRFGDMEIED-----EAPNAPKQ 164
           HDDLKQLF VS T+++A LIAK+ HFAYSTPSK   FR   D E        + P+APKQ
Sbjct: 345 HDDLKQLFHVSNTIRDATLIAKKSHFAYSTPSKVQTFRSPLDPEESSGFDDLQTPDAPKQ 404

Query: 165 DRKNYRKSRIDGKKLGDITVALFHSPEK 248
            R  + +SR+ G+KL  I +ALF S E+
Sbjct: 405 SR--HFRSRLRGRKLSGIAIALFSSDEE 430