BLASTX nr result

ID: Coptis23_contig00015104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015104
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273418.1| PREDICTED: uncharacterized protein LOC100267...   107   4e-21
ref|XP_003547353.1| PREDICTED: uncharacterized protein LOC100811...    99   1e-18
ref|NP_001143787.1| hypothetical protein [Zea mays] gi|195626994...    99   1e-18
ref|XP_002515247.1| conserved hypothetical protein [Ricinus comm...    98   2e-18
ref|XP_003533137.1| PREDICTED: uncharacterized protein LOC100778...    97   4e-18

>ref|XP_002273418.1| PREDICTED: uncharacterized protein LOC100267130 [Vitis vinifera]
           gi|296083220|emb|CBI22856.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score =  107 bits (266), Expect = 4e-21
 Identities = 67/132 (50%), Positives = 79/132 (59%), Gaps = 1/132 (0%)
 Frame = +3

Query: 180 LDAADQKLVREISELAMLKRARVERXXXXXXXXXXXXLXXXXXXXXXLCALVITVLFCLV 359
           LDAADQKLVREI+ELAMLKRARVER                      L A+V TV FCLV
Sbjct: 97  LDAADQKLVREIAELAMLKRARVERRKALRKMKVAKA-----SSNSSLFAMVFTVFFCLV 151

Query: 360 ILFQGLFSGSNSHASFEGSPESARATRGPLISVQYYKNPAAGNINP-SSESPNLAEQISR 536
           ILFQGL S  NS  +F GSPESA  T G LISVQYY + +  ++    SESP+L EQ+  
Sbjct: 152 ILFQGLSSRRNSAITFHGSPESAAPTEGGLISVQYYHSISPSDVKEHGSESPSLVEQLPG 211

Query: 537 SGPQEENSRVAG 572
              +E+  +  G
Sbjct: 212 LEAKEKAGKAPG 223


>ref|XP_003547353.1| PREDICTED: uncharacterized protein LOC100811193 [Glycine max]
          Length = 221

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 59/111 (53%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
 Frame = +3

Query: 180 LDAADQKLVREISELAMLKRARVERXXXXXXXXXXXXLXXXXXXXXXLCALVITVLFCLV 359
           LDAAD KL+REISELAMLKRAR+ER                      L A+V TV+F +V
Sbjct: 110 LDAADNKLIREISELAMLKRARIERMKALKKMKVVKSSSPSSSNTSSLLAMVFTVVFFVV 169

Query: 360 ILFQGLFSGSNSHASFEGSPESARATRGPLISVQYYKNPAAGNIN-PSSES 509
           I+FQG+ SG  S ASF+GSP SA  + G LISVQY  NP+A + N P SES
Sbjct: 170 IIFQGMSSGKTSVASFQGSPVSAGESEGGLISVQYQLNPSAVDSNAPGSES 220


>ref|NP_001143787.1| hypothetical protein [Zea mays] gi|195626994|gb|ACG35327.1|
           hypothetical protein [Zea mays]
           gi|413917542|gb|AFW57474.1| hypothetical protein
           ZEAMMB73_888241 [Zea mays] gi|413917543|gb|AFW57475.1|
           hypothetical protein ZEAMMB73_888241 [Zea mays]
          Length = 243

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
 Frame = +3

Query: 180 LDAADQKLVREISELAMLKRARVERXXXXXXXXXXXXLXXXXXXXXXLCALVITVLFCLV 359
           LD +DQKL+ E+SELA+LKRARVER                      LC L++TV+FC+V
Sbjct: 111 LDVSDQKLLNELSELAVLKRARVERMKALKKMKNAKQ----GFSGGNLCPLIVTVIFCVV 166

Query: 360 ILFQGLFSGSNSHASFEGSPESA-RATRGPLISVQYYKNPAAGNINPSSESPNLAEQISR 536
           IL+QG FSG     SF GSPES+ R TR  LIS+++YKN +     P SE+    + +  
Sbjct: 167 ILWQGFFSGHGPAVSFHGSPESSIRGTRSSLISIRFYKNHSNTRPPPFSETTAAPDNVVE 226

Query: 537 SGPQEENSRVA 569
           +GP+  N   A
Sbjct: 227 TGPRLRNRNQA 237


>ref|XP_002515247.1| conserved hypothetical protein [Ricinus communis]
           gi|223545727|gb|EEF47231.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 59/122 (48%), Positives = 76/122 (62%), Gaps = 1/122 (0%)
 Frame = +3

Query: 180 LDAADQKLVREISELAMLKRARVERXXXXXXXXXXXXLXXXXXXXXXLCALVITVLFCLV 359
           LDAADQKLV+EI+ELAM KRAR+ER                      + A++IT LFCLV
Sbjct: 131 LDAADQKLVQEITELAMRKRARMERIKALKKMRAAKS----SSWNSSVYAMIITFLFCLV 186

Query: 360 ILFQGLFSGSNSHASFEGSPESARATRGPLISVQYYKNPAAGNINPSSESPNLAE-QISR 536
           ++FQG+ + S+     +GSPE A A    LIS+Q+YKNPA G   P S SP+L+E Q+S 
Sbjct: 187 LIFQGICAKSSRSMFLQGSPEPAVAASEDLISIQFYKNPAFGIDGPGSGSPSLSEGQVSG 246

Query: 537 SG 542
           SG
Sbjct: 247 SG 248


>ref|XP_003533137.1| PREDICTED: uncharacterized protein LOC100778592 [Glycine max]
          Length = 256

 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 60/132 (45%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
 Frame = +3

Query: 180 LDAADQKLVREISELAMLKRARVERXXXXXXXXXXXXLXXXXXXXXXLCALVITVLFCLV 359
           LDAAD KL+REISELAMLKRAR+ER                      L A++ TV+F +V
Sbjct: 125 LDAADHKLIREISELAMLKRARMERMKTLKKMKIAKSSAPSSSNASSLLAMIFTVVFFVV 184

Query: 360 ILFQGLFSGSNSHASFEGSPESARATRGPLISVQYYKNPAAGNIN-PSSESPNLAEQISR 536
           I+ QG+ SG  S ASF+GSP SA  +   LISV Y  NP+A + N P SES    +Q++ 
Sbjct: 185 IILQGMSSGKTSVASFQGSPVSAGESEDGLISVHYQLNPSAIDSNAPGSESHTFVQQVAG 244

Query: 537 SGPQEENSRVAG 572
           S   E+  R +G
Sbjct: 245 SDLPEKLRRDSG 256


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