BLASTX nr result

ID: Coptis23_contig00015094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015094
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71787.1| hypothetical protein VITISV_031913 [Vitis vinifera]    79   2e-12
emb|CAN79373.1| hypothetical protein VITISV_028502 [Vitis vinifera]    78   3e-12
emb|CAN76063.1| hypothetical protein VITISV_040632 [Vitis vinifera]    76   1e-11
emb|CAN68329.1| hypothetical protein VITISV_030159 [Vitis vinifera]    76   2e-11
emb|CAN65836.1| hypothetical protein VITISV_025816 [Vitis vinifera]    75   2e-11

>emb|CAN71787.1| hypothetical protein VITISV_031913 [Vitis vinifera]
          Length = 1667

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 48/117 (41%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
 Frame = +3

Query: 12  RLFNFMSGLQSWAQIERRRQGVKDLPSAMDAADSLVDYKLG-------KPSESDASKPKS 170
           +LFNFMSGLQ WAQ E RRQGV+DLP+AM AAD L+DYK+G       +P      K K 
Sbjct: 233 KLFNFMSGLQGWAQTELRRQGVRDLPAAMSAADCLMDYKMGGASSTTQRPKSEGGKKAKF 292

Query: 171 KGMNXXXXXXXXXXXXXXXXXXXXGQESKGQIQAL----SFAMVPIHRAKDCPKRER 329
           +G                       + +K   Q       F     HRAKDCPKRE+
Sbjct: 293 EGKTSQKSGWKKQGKKPAVGGKPVEKTTKVVQQTTRMMGCFICNGPHRAKDCPKREK 349


>emb|CAN79373.1| hypothetical protein VITISV_028502 [Vitis vinifera]
          Length = 1439

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 48/107 (44%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
 Frame = +3

Query: 12  RLFNFMSGLQSWAQIERRRQGVKDLPSAMDAADSLVDYKLGKPSESDASKPKSKGMNXXX 191
           +LFNFMSGLQ WAQ E RRQGV+DLP+AM AAD LVDYK+G  + S   +P+S+G N   
Sbjct: 206 KLFNFMSGLQGWAQTELRRQGVRDLPAAMAAADCLVDYKMG-GAISTTQRPRSEGGNKAK 264

Query: 192 XXXXXXXXXXXXXXXXXGQESKGQIQALSFAMVPIHR-AKDCPKRER 329
                              E K Q +  +    P+ +  KDCPKRE+
Sbjct: 265 FEGKTSKK----------SEWKKQGKKPAVGGKPVEKTTKDCPKREK 301


>emb|CAN76063.1| hypothetical protein VITISV_040632 [Vitis vinifera]
          Length = 1453

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 48/117 (41%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
 Frame = +3

Query: 12  RLFNFMSGLQSWAQIERRRQGVKDLPSAMDAADSLVDYKLG-------KPSESDASKPKS 170
           +LFNFMSGLQ WAQ E RRQGV+DLP+AM AAD LVD K+G       +P      K K 
Sbjct: 233 KLFNFMSGLQGWAQTELRRQGVRDLPAAMXAADCLVDXKMGGASSTTQRPKSEGGKKAKF 292

Query: 171 KGMNXXXXXXXXXXXXXXXXXXXXGQESKGQIQAL----SFAMVPIHRAKDCPKRER 329
           +G                       + +K   Q       F     HRAKDCPKRE+
Sbjct: 293 EGKTSQKSGWKKQGKKPAVGGKPVEKTTKVVQQTTRMMGCFICNGPHRAKDCPKREK 349


>emb|CAN68329.1| hypothetical protein VITISV_030159 [Vitis vinifera]
          Length = 1330

 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 48/106 (45%), Positives = 62/106 (58%)
 Frame = +3

Query: 12  RLFNFMSGLQSWAQIERRRQGVKDLPSAMDAADSLVDYKLGKPSESDASKPKSKGMNXXX 191
           +LFNFMSGLQ WAQ+E RRQGV+DLP+ M A D LV YK+G  + S   +PKS G     
Sbjct: 205 KLFNFMSGLQGWAQMELRRQGVRDLPATMAAVDCLVHYKMG-CAISTTQRPKSDG----- 258

Query: 192 XXXXXXXXXXXXXXXXXGQESKGQIQALSFAMVPIHRAKDCPKRER 329
                            G+++K + +A S    P HRA+DCPKRE+
Sbjct: 259 -----------------GKKAKAEGKA-SKKPGP-HRARDCPKREK 285


>emb|CAN65836.1| hypothetical protein VITISV_025816 [Vitis vinifera]
          Length = 1193

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 47/117 (40%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
 Frame = +3

Query: 12  RLFNFMSGLQSWAQIERRRQGVKDLPSAMDAADSLVDYKLGKPSESDASKPKSKGMNXXX 191
           +LFNFMSGLQ WAQ E RRQGV+DLP+ M AAD LVDYK+G  + S   +P+S+G     
Sbjct: 220 KLFNFMSGLQGWAQTELRRQGVRDLPTVMAAADYLVDYKMG-GAVSTTQRPRSEGGKKAK 278

Query: 192 XXXXXXXXXXXXXXXXXGQESKGQIQALS-----------FAMVPIHRAKDCPKRER 329
                             +  K   +              F     HRAKDCPKRE+
Sbjct: 279 NEGKTKKSDWKKHNKKPAEGGKPVEKTTKVVQQTTRMTGCFICNGPHRAKDCPKREK 335


Top