BLASTX nr result

ID: Coptis23_contig00015046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015046
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]   172   1e-40
ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...   170   6e-40
ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Rici...   169   8e-40
ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycin...   169   1e-39
ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycin...   167   3e-39

>emb|CAN82068.1| hypothetical protein VITISV_037474 [Vitis vinifera]
          Length = 223

 Score =  172 bits (436), Expect = 1e-40
 Identities = 87/150 (58%), Positives = 100/150 (66%), Gaps = 3/150 (2%)
 Frame = +3

Query: 369 IFKNMGLYSLPTPAEGVLCIILVNTAISISIFKGIVRXXXXXXXXXXXXXXXXXXXXXXX 548
           I+ +MGL SLP P+EGVLC++LVNTA+SISIFKGIVR                       
Sbjct: 69  IWSSMGLSSLPAPSEGVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPT 128

Query: 549 XXLI---LPPSDSFAEEFRNRVPAIRFCSVFNCNSFNQECLVCLTGFEPDSMINHLCCGH 719
                    PS++  EEFR+R PAIRF +V +C     +C VCLT FEPDS INHL CGH
Sbjct: 129 SEPFEFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGH 188

Query: 720 VFHKVCLEKWLDYWNITCPLCRSPLMPEEE 809
            FHKVCLEKWLDYWNITCPLCR+PLMPEEE
Sbjct: 189 FFHKVCLEKWLDYWNITCPLCRTPLMPEEE 218


>ref|XP_002264718.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B [Vitis vinifera]
          Length = 151

 Score =  170 bits (430), Expect = 6e-40
 Identities = 86/146 (58%), Positives = 97/146 (66%), Gaps = 3/146 (2%)
 Frame = +3

Query: 381 MGLYSLPTPAEGVLCIILVNTAISISIFKGIVRXXXXXXXXXXXXXXXXXXXXXXXXXLI 560
           MGL SLP P+EGVLC++LVNTA+SISIFKGIVR                           
Sbjct: 1   MGLSSLPAPSEGVLCVLLVNTALSISIFKGIVRAILHVIGIHLSATPSSSDSPEPTSEPF 60

Query: 561 ---LPPSDSFAEEFRNRVPAIRFCSVFNCNSFNQECLVCLTGFEPDSMINHLCCGHVFHK 731
                PS++  EEFR+R PAIRF +V +C     +C VCLT FEPDS INHL CGH FHK
Sbjct: 61  EFRRNPSETCMEEFRSRNPAIRFDTVCSCKRPEHDCAVCLTRFEPDSEINHLPCGHFFHK 120

Query: 732 VCLEKWLDYWNITCPLCRSPLMPEEE 809
           VCLEKWLDYWNITCPLCR+PLMPEEE
Sbjct: 121 VCLEKWLDYWNITCPLCRTPLMPEEE 146


>ref|XP_002533895.1| RING-H2 finger protein ATL3J, putative [Ricinus communis]
           gi|223526146|gb|EEF28485.1| RING-H2 finger protein
           ATL3J, putative [Ricinus communis]
          Length = 156

 Score =  169 bits (429), Expect = 8e-40
 Identities = 84/153 (54%), Positives = 98/153 (64%), Gaps = 6/153 (3%)
 Frame = +3

Query: 381 MGLYSLPTPAEGVLCIILVNTAISISIFKGIVRXXXXXXXXXXXXXXXXXXXXXXXXX-- 554
           MGL SLP P+EGVLC++LVNTA+SISIFKGIVR                           
Sbjct: 1   MGLSSLPAPSEGVLCVLLVNTALSISIFKGIVRSILHIVGIRLSSSSSSTASSDYNEDPT 60

Query: 555 ----LILPPSDSFAEEFRNRVPAIRFCSVFNCNSFNQECLVCLTGFEPDSMINHLCCGHV 722
                 LPPS+S+  EFR+R PA RF SV  C     +C VCLT FEP+S IN L CGH+
Sbjct: 61  DLFEFRLPPSESYINEFRSRTPATRFDSVCRCKQIEHDCSVCLTRFEPESEINCLSCGHL 120

Query: 723 FHKVCLEKWLDYWNITCPLCRSPLMPEEEVPSA 821
           FHKVCLEKWLDYWN+TCPLCRSP++P EE  S+
Sbjct: 121 FHKVCLEKWLDYWNVTCPLCRSPVIPSEEDTSS 153


>ref|NP_001240255.1| uncharacterized protein LOC100786803 [Glycine max]
           gi|255639664|gb|ACU20126.1| unknown [Glycine max]
          Length = 155

 Score =  169 bits (427), Expect = 1e-39
 Identities = 83/152 (54%), Positives = 97/152 (63%), Gaps = 7/152 (4%)
 Frame = +3

Query: 381 MGLYSLPTPAEGVLCIILVNTAISISIFKGIVRXXXXXXXXXXXXXXXXXXXXXXXXXLI 560
           MGL SLP P+EGVLC++LVNT +SISIFKGIVR                           
Sbjct: 1   MGLSSLPAPSEGVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSSSTSPSSPDPSLTA 60

Query: 561 -------LPPSDSFAEEFRNRVPAIRFCSVFNCNSFNQECLVCLTGFEPDSMINHLCCGH 719
                  L PS+S+ EEFR+R P +RF SV  C     +C VCLT FEP+S IN L CGH
Sbjct: 61  PESFEFHLSPSESYIEEFRSRTPTLRFDSVCCCKQPEHDCSVCLTQFEPESEINRLSCGH 120

Query: 720 VFHKVCLEKWLDYWNITCPLCRSPLMPEEEVP 815
           +FHKVCLEKWLDYWNITCPLCR+PLMPE++ P
Sbjct: 121 LFHKVCLEKWLDYWNITCPLCRTPLMPEDDTP 152


>ref|NP_001236683.1| uncharacterized protein LOC100305532 [Glycine max]
           gi|255625823|gb|ACU13256.1| unknown [Glycine max]
          Length = 154

 Score =  167 bits (424), Expect = 3e-39
 Identities = 83/151 (54%), Positives = 97/151 (64%), Gaps = 6/151 (3%)
 Frame = +3

Query: 381 MGLYSLPTPAEGVLCIILVNTAISISIFKGIVRXXXXXXXXXXXXXXXXXXXXXXXXX-- 554
           MGL SLP P+EGVLC++LVNT +SISIFKGIVR                           
Sbjct: 1   MGLSSLPAPSEGVLCVLLVNTVLSISIFKGIVRTILHIVGIHLPSSSTSPSSPDPSQAAP 60

Query: 555 ----LILPPSDSFAEEFRNRVPAIRFCSVFNCNSFNQECLVCLTGFEPDSMINHLCCGHV 722
               L L PS+S+ EEFR+R P +RF SV        +C VCLT FEP+S IN L CGH+
Sbjct: 61  ESFELHLSPSESYIEEFRSRTPTLRFDSVCCSKRLEHDCSVCLTQFEPESEINRLSCGHL 120

Query: 723 FHKVCLEKWLDYWNITCPLCRSPLMPEEEVP 815
           FHKVCLEKWLDYWNITCPLCR+PLMPE++ P
Sbjct: 121 FHKVCLEKWLDYWNITCPLCRTPLMPEDDTP 151


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