BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015036
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232...   285   2e-74
ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu...   281   2e-73
ref|XP_002326849.1| predicted protein [Populus trichocarpa] gi|2...   280   5e-73
gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein ...   279   7e-73
ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|2...   278   2e-72

>ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera]
            gi|297734640|emb|CBI16691.3| unnamed protein product
            [Vitis vinifera]
          Length = 812

 Score =  285 bits (728), Expect = 2e-74
 Identities = 135/289 (46%), Positives = 211/289 (73%), Gaps = 3/289 (1%)
 Frame = -3

Query: 944  KDKKKQSRIEIFVGGLDRKAVEEDLIKVFGAFGEIKAARIVKHPITHKSKGYAFITFATS 765
            K+++K+   E+FVGGLD+ A E+DL KVF   GE+   R++ +P T K+KG+AF+ FAT 
Sbjct: 224  KERRKRKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATV 283

Query: 764  EQAKKVLAEFKDGVEVKGKHAGISASQDSDTIYMGNICKSWTKEQVLETLKGYGIEQIED 585
            EQAK+ + E K+ V V GK  G++ SQDSDT+++GNICK+WTKE + E LK YG+E +ED
Sbjct: 284  EQAKRAVTELKNPV-VNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVED 342

Query: 584  IFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLRKPDAVFGRNRSAKVAFVPS-MHPSE 408
            + L ED  +EG  RGFA++EF + SDAM AF+RL+K D VFG +R+AKV+F  S + P +
Sbjct: 343  LTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGD 402

Query: 407  EALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEKVQLSRDLVNVRREDFGFVSFTSREN 228
            E ++QVKTV+++GL  SW+E ++++L ++YG++EK++L+R++ + +R+DFGFV+F + + 
Sbjct: 403  EIMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDA 462

Query: 227  ALACVAGINDAQVEDGD--VTVRANLAKPQYKGRLGKSARGGYRVQKDG 87
            A+ C   IN+A++ +G+    VRA L++P  +G+    +RG +R  + G
Sbjct: 463  AVTCAKSINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGG 511


>ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis]
            gi|223534154|gb|EEF35870.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 784

 Score =  281 bits (719), Expect = 2e-73
 Identities = 133/284 (46%), Positives = 208/284 (73%), Gaps = 3/284 (1%)
 Frame = -3

Query: 944  KDKKKQSRIEIFVGGLDRKAVEEDLIKVFGAFGEIKAARIVKHPITHKSKGYAFITFATS 765
            K+++K+   E+FVGGLD+ A E+DL KVF   GE+   R++ +P T K+KG+AF+ F+T 
Sbjct: 205  KERRKRKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFSTV 264

Query: 764  EQAKKVLAEFKDGVEVKGKHAGISASQDSDTIYMGNICKSWTKEQVLETLKGYGIEQIED 585
            EQAKK + E K+ V + GK  G++ SQDSDT+++GNICK+WTKE + E LK YG+E +ED
Sbjct: 265  EQAKKAVTELKNPV-INGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVED 323

Query: 584  IFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLRKPDAVFGRNRSAKVAFVPS-MHPSE 408
            + L ED  +EG  RGFA++EF + SDAM AF+RL+K D +FG +R AKV+F  S + P +
Sbjct: 324  VTLVEDSNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGD 383

Query: 407  EALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEKVQLSRDLVNVRREDFGFVSFTSREN 228
            E ++QVKTV+V+GL  SW+E ++++L +++G++EK++L+R++ + +R+DFGFV+F S + 
Sbjct: 384  EIMAQVKTVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDA 443

Query: 227  ALACVAGINDAQVEDGD--VTVRANLAKPQYKGRLGKSARGGYR 102
            A+ C   IN+A++ +GD    VRA L++P  +G+   ++R  +R
Sbjct: 444  AVTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHASRADFR 487


>ref|XP_002326849.1| predicted protein [Populus trichocarpa] gi|222835164|gb|EEE73599.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  280 bits (715), Expect = 5e-73
 Identities = 134/284 (47%), Positives = 207/284 (72%), Gaps = 3/284 (1%)
 Frame = -3

Query: 944 KDKKKQSRIEIFVGGLDRKAVEEDLIKVFGAFGEIKAARIVKHPITHKSKGYAFITFATS 765
           K+++K+   EIFVGGLD+ A E+DL KVF   GE+  AR++ +P T K+KG+AF+ FAT 
Sbjct: 24  KERRKRKEFEIFVGGLDKDATEDDLRKVFSRVGEVTEARLMMNPQTKKNKGFAFLRFATV 83

Query: 764 EQAKKVLAEFKDGVEVKGKHAGISASQDSDTIYMGNICKSWTKEQVLETLKGYGIEQIED 585
           EQAK+ + E K+ V + GK  G++ SQDSDT+++GNICK+WTKE + E LK YG+E +ED
Sbjct: 84  EQAKRAVTELKNPV-INGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVED 142

Query: 584 IFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLRKPDAVFGRNRSAKVAFVPS-MHPSE 408
           + L ED  + G  RGFA++EF + SDAM AF+RL+K D +FG +R AKV+F  S + P +
Sbjct: 143 LTLVEDSNNLGMNRGFAFLEFSSRSDAMNAFKRLQKRDVLFGVDRPAKVSFADSFIGPGD 202

Query: 407 EALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEKVQLSRDLVNVRREDFGFVSFTSREN 228
           E ++QVKT++++GL  SW+E + + L ++YG +EK++L+R++ + RR+DFGFV+F + + 
Sbjct: 203 EIMAQVKTLFIDGLPASWDEDRFRVLLKKYGNIEKIELARNMPSARRKDFGFVTFDTHDA 262

Query: 227 ALACVAGINDAQVEDGD--VTVRANLAKPQYKGRLGKSARGGYR 102
           A+AC   IN+ ++ +GD  V VRA L++P  +G+   ++RG ++
Sbjct: 263 AVACAKSINNVELGEGDNKVKVRARLSRPLQRGKGKHASRGDFQ 306


>gb|AAN77868.1| putative heterogeneous nuclear ribonucleoprotein [Vitis vinifera]
          Length = 342

 Score =  279 bits (714), Expect = 7e-73
 Identities = 133/289 (46%), Positives = 209/289 (72%), Gaps = 3/289 (1%)
 Frame = -3

Query: 944 KDKKKQSRIEIFVGGLDRKAVEEDLIKVFGAFGEIKAARIVKHPITHKSKGYAFITFATS 765
           K+++K+   E+FVGGLD+ A E+DL KVF   GE+   R++ +P T K+KG+AF+ FAT 
Sbjct: 23  KERRKRKEFEVFVGGLDKDATEDDLKKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATV 82

Query: 764 EQAKKVLAEFKDGVEVKGKHAGISASQDSDTIYMGNICKSWTKEQVLETLKGYGIEQIED 585
           EQAK+ + E K+ V V GK  G++ SQDSDT+++GNICK+WTKE + E LK YG+E +ED
Sbjct: 83  EQAKRAVTELKNPV-VNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVED 141

Query: 584 IFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLRKPDAVFGRNRSAKVAFVPS-MHPSE 408
           + L ED  +EG  RGFA++EF   SDAM AF+RL++   VFG +R+AKV+F  S + P +
Sbjct: 142 LTLVEDSNNEGMNRGFAFLEFSFRSDAMDAFKRLQEERCVFGVDRTAKVSFTDSFIDPGD 201

Query: 407 EALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEKVQLSRDLVNVRREDFGFVSFTSREN 228
           E ++QVKTV+++GL  SW+E ++++L ++YG++EK++L+R++ + +R+DFGFV+F + + 
Sbjct: 202 EIMAQVKTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDA 261

Query: 227 ALACVAGINDAQVEDGD--VTVRANLAKPQYKGRLGKSARGGYRVQKDG 87
           A+ C   IN+A++ +G+    VRA L++P  +G+    +RG +R  + G
Sbjct: 262 AVTCAKSINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGG 310


>ref|XP_002302501.1| predicted protein [Populus trichocarpa] gi|222844227|gb|EEE81774.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  278 bits (711), Expect = 2e-72
 Identities = 131/284 (46%), Positives = 206/284 (72%), Gaps = 3/284 (1%)
 Frame = -3

Query: 944 KDKKKQSRIEIFVGGLDRKAVEEDLIKVFGAFGEIKAARIVKHPITHKSKGYAFITFATS 765
           K+++K+   E+FVGGLD+ A E+DL K+F   GE+   R++ +P T K+KG+AF+ FAT 
Sbjct: 24  KERRKRKEFEVFVGGLDKDATEDDLRKIFSRVGEVTEVRLMMNPQTKKNKGFAFLRFATV 83

Query: 764 EQAKKVLAEFKDGVEVKGKHAGISASQDSDTIYMGNICKSWTKEQVLETLKGYGIEQIED 585
           EQAK+ + E K+ V + GK  G++ SQDSDT+++GNICK+WTKE + E LK YG+E ++D
Sbjct: 84  EQAKRAVTELKNPV-INGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVKD 142

Query: 584 IFLPEDPKSEGKIRGFAYMEFGAHSDAMAAFQRLRKPDAVFGRNRSAKVAFVPS-MHPSE 408
           + L ED  + G  RGFA++EF + SDAM AF+RL+K D +FG +R AKV+F  S + P +
Sbjct: 143 LTLVEDSNNAGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGD 202

Query: 407 EALSQVKTVYVEGLTDSWNEGKLKQLCEQYGQVEKVQLSRDLVNVRREDFGFVSFTSREN 228
           E ++QVKTV+++GL  SW+E +++ L ++YG++EK++L+R++ + RR+DFGFV+F + + 
Sbjct: 203 EIMAQVKTVFIDGLPASWDEDRVRVLLKKYGEIEKIELARNMPSARRKDFGFVTFDTHDA 262

Query: 227 ALACVAGINDAQVEDGD--VTVRANLAKPQYKGRLGKSARGGYR 102
           A+ C   IN+A++ +GD    VRA L++P  +G+    +RG +R
Sbjct: 263 AVTCAKSINNAELGEGDNKAKVRARLSRPLQRGKGKHLSRGDFR 306