BLASTX nr result

ID: Coptis23_contig00015025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015025
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307037.1| predicted protein [Populus trichocarpa] gi|2...   174   2e-41
emb|CBI21604.3| unnamed protein product [Vitis vinifera]              163   4e-38
dbj|BAA96904.1| unnamed protein product [Arabidopsis thaliana]        160   3e-37
ref|XP_003630285.1| hypothetical protein MTR_8g093850 [Medicago ...   159   4e-37
gb|AAO22663.1| unknown protein [Arabidopsis thaliana] gi|5025357...   159   7e-37

>ref|XP_002307037.1| predicted protein [Populus trichocarpa] gi|222856486|gb|EEE94033.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  174 bits (441), Expect = 2e-41
 Identities = 101/224 (45%), Positives = 141/224 (62%)
 Frame = +3

Query: 54  GFEAFEPIFGKANAEWAXXXXXXXXXXXXXXXFLPFLFHVHALDIYSLRIHVTDFHSYTF 233
           GF+ FEPIF +    WA                  FL H+ A D   L+I VTD+HS TF
Sbjct: 3   GFQEFEPIFNEPRIGWAKNSNPGSGLMDQ------FLMHIFAPDDNHLKIQVTDYHSNTF 56

Query: 234 DSIRSIQQFEDMRDDIGVGGSWSEFVDYVIESLKSDNVKLVVGSAKSKNSDADHGAKLAK 413
           ++++S+ Q +DMRD IG+GGSW+EFV+Y++ S K+++VKLV+     K SD+D G   AK
Sbjct: 57  EAVKSVMQLDDMRDCIGIGGSWAEFVEYLVASFKAEDVKLVL----EKLSDSD-GVAYAK 111

Query: 414 LIAHKSKGMPRISISLDRLMESSASDAMANLSLQLFKAFKSKHTLPVKEEQEKCQQLTNK 593
           L+A KSKGMP ISISL +L++++A DAMAN+S  LFKAFK    L V +E+E   QLT  
Sbjct: 112 LVAQKSKGMPLISISLTKLLDNAARDAMANMSFGLFKAFKRTKNL-VLQEKEHSLQLTKV 170

Query: 594 SSIEQARHEHIQNQHDPVLFSRKQKLQKLSISDNISPVTTASSN 725
            S E+ R E+IQ+Q       ++QKL+K++ SD +      +SN
Sbjct: 171 ISAEKERSENIQSQ-----LGKRQKLEKMNSSDRLDVSGPPASN 209


>emb|CBI21604.3| unnamed protein product [Vitis vinifera]
          Length = 169

 Score =  163 bits (412), Expect = 4e-38
 Identities = 89/168 (52%), Positives = 115/168 (68%)
 Frame = +3

Query: 54  GFEAFEPIFGKANAEWAXXXXXXXXXXXXXXXFLPFLFHVHALDIYSLRIHVTDFHSYTF 233
           GFE FE IFG+A  EWA                  FLFH  A+D   LRI VTDFHS T+
Sbjct: 2   GFEDFEAIFGEAKPEWANESRR-------------FLFHFDAIDPSRLRIRVTDFHSSTW 48

Query: 234 DSIRSIQQFEDMRDDIGVGGSWSEFVDYVIESLKSDNVKLVVGSAKSKNSDADHGAKLAK 413
           +++RS++Q EDMRD +G+GGSWSEFVDYVI S+KS++VKLV+     +N+ +D GA  AK
Sbjct: 49  EAVRSVEQLEDMRDTVGIGGSWSEFVDYVIASIKSEDVKLVL----EENAKSD-GAAYAK 103

Query: 414 LIAHKSKGMPRISISLDRLMESSASDAMANLSLQLFKAFKSKHTLPVK 557
           L+A KSKGMP I  SL +L  S+AS+AM NLSL+LFK++K+   L +K
Sbjct: 104 LVAQKSKGMPLICFSLAKLENSAASEAMMNLSLELFKSYKNMQNLFIK 151


>dbj|BAA96904.1| unnamed protein product [Arabidopsis thaliana]
          Length = 245

 Score =  160 bits (404), Expect = 3e-37
 Identities = 85/166 (51%), Positives = 111/166 (66%)
 Frame = +3

Query: 57  FEAFEPIFGKANAEWAXXXXXXXXXXXXXXXFLPFLFHVHALDIYSLRIHVTDFHSYTFD 236
           FE FEPIFG+   E +                   LFHV+A D Y+L +HVTDF S  + 
Sbjct: 4   FEKFEPIFGEVVPERSDPGSGLLRRC---------LFHVYASDSYNLTVHVTDFISGVWT 54

Query: 237 SIRSIQQFEDMRDDIGVGGSWSEFVDYVIESLKSDNVKLVVGSAKSKNSDADHGAKLAKL 416
           +I S+ Q +DMRD +G+GGSWSEFVDY + SLKSDNVKL++G     N     G K A+L
Sbjct: 55  TILSVSQLDDMRDTVGIGGSWSEFVDYTVASLKSDNVKLLLGETSVSN-----GVKTARL 109

Query: 417 IAHKSKGMPRISISLDRLMESSASDAMANLSLQLFKAFKSKHTLPV 554
           ++ K+KGMPRI++ L +++ESSAS+AMANLSL+LF+AFKSK  L V
Sbjct: 110 VSQKAKGMPRINVPLTKMVESSASEAMANLSLELFRAFKSKQHLQV 155


>ref|XP_003630285.1| hypothetical protein MTR_8g093850 [Medicago truncatula]
           gi|355524307|gb|AET04761.1| hypothetical protein
           MTR_8g093850 [Medicago truncatula]
          Length = 243

 Score =  159 bits (403), Expect = 4e-37
 Identities = 98/223 (43%), Positives = 133/223 (59%)
 Frame = +3

Query: 57  FEAFEPIFGKANAEWAXXXXXXXXXXXXXXXFLPFLFHVHALDIYSLRIHVTDFHSYTFD 236
           F+ FEPIF +   EW                  PFLFHVH  +   L IHVT+FHS T++
Sbjct: 3   FQDFEPIFAEPKLEWKPHCSHPLR---------PFLFHVHPPNSSHLVIHVTNFHSDTWE 53

Query: 237 SIRSIQQFEDMRDDIGVGGSWSEFVDYVIESLKSDNVKLVVGSAKSKNSDADHGAKLAKL 416
           +  S+   ED+ D IG+GGSWSEF +Y + SLKS+++KLV+      NS++D G   AKL
Sbjct: 54  AHLSVSSLEDIMDIIGIGGSWSEFANYFVNSLKSEDLKLVL----EPNSNSD-GVSSAKL 108

Query: 417 IAHKSKGMPRISISLDRLMESSASDAMANLSLQLFKAFKSKHTLPVKEEQEKCQQLTNKS 596
           IA KSKGMP I+I L +L++SSAS+A++NLSL LFKAF+S     V + QE+  QLTN  
Sbjct: 109 IAQKSKGMPLITIPLTKLVDSSASEAVSNLSLSLFKAFRSTKCSLV-DVQERSVQLTNMM 167

Query: 597 SIEQARHEHIQNQHDPVLFSRKQKLQKLSISDNISPVTTASSN 725
           + E+ R+E I          R+QK QK+S S+        + N
Sbjct: 168 ASEKERNETIP-------LDRRQKFQKISDSEKAGVSNNGAQN 203


>gb|AAO22663.1| unknown protein [Arabidopsis thaliana] gi|50253576|gb|AAT71990.1|
           At1g12020 [Arabidopsis thaliana]
          Length = 236

 Score =  159 bits (401), Expect = 7e-37
 Identities = 84/164 (51%), Positives = 110/164 (67%)
 Frame = +3

Query: 57  FEAFEPIFGKANAEWAXXXXXXXXXXXXXXXFLPFLFHVHALDIYSLRIHVTDFHSYTFD 236
           FE FEPIFG+   E +                   LFHV+A D Y+L +HVTDF S  + 
Sbjct: 4   FEKFEPIFGEVVPERSDPGSGLLRRC---------LFHVYASDSYNLTVHVTDFISGVWT 54

Query: 237 SIRSIQQFEDMRDDIGVGGSWSEFVDYVIESLKSDNVKLVVGSAKSKNSDADHGAKLAKL 416
           +I S+ Q +DMRD +G+GGSWSEFVDY + SLKSDNVKL++G     N     G K A+L
Sbjct: 55  TILSVSQLDDMRDTVGIGGSWSEFVDYTVASLKSDNVKLLLGETSVSN-----GVKTARL 109

Query: 417 IAHKSKGMPRISISLDRLMESSASDAMANLSLQLFKAFKSKHTL 548
           ++ K+KGMPRI++ L +++ESSAS+AMANLSL+LF+AFKSK  L
Sbjct: 110 VSQKAKGMPRINVPLTKMVESSASEAMANLSLELFRAFKSKQHL 153


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