BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015004
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447837.1| hypothetical protein SORBIDRAFT_06g016627 [S...    66   3e-09
gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like p...    65   4e-09
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    64   1e-08
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    64   1e-08
ref|XP_002447028.1| hypothetical protein SORBIDRAFT_06g027160 [S...    63   2e-08

>ref|XP_002447837.1| hypothetical protein SORBIDRAFT_06g016627 [Sorghum bicolor]
           gi|241939020|gb|EES12165.1| hypothetical protein
           SORBIDRAFT_06g016627 [Sorghum bicolor]
          Length = 448

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
 Frame = -3

Query: 263 CVLCWREAETSQHLFFECTYSKNVWREVMSLTGYVRQNPTTW---QDEIQWLIQK-TSGN 96
           C LC R  ET+ HLF EC +S+ +W +V + TG V   P+ W    D  QW +    S N
Sbjct: 318 CHLCVRNLETTSHLFQECKFSRMIWDKVSTWTGAVNLKPSNWGCIDDMEQWFVNMGNSNN 377

Query: 95  GCKQDALKLVTNAFFYWIWQERNGRIFKH 9
              +D ++ +     + IW+ERN R+F +
Sbjct: 378 NEVRDGIRSIVILTIWEIWRERNNRVFNN 406


>gb|ABD33259.2| non-LTR retroelement reverse transcriptase-like protein, related
           [Medicago truncatula]
          Length = 196

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/86 (36%), Positives = 47/86 (54%)
 Frame = -3

Query: 266 ICVLCWREAETSQHLFFECTYSKNVWREVMSLTGYVRQNPTTWQDEIQWLIQKTSGNGCK 87
           +CVLC +E ET  HLFF C Y+  VW+ VM     +  N + W   +Q++    + N   
Sbjct: 77  VCVLCTKENETHSHLFFSCDYADAVWKGVMRWMN-MTVNTSNWHSILQYIQSHCNSNNGM 135

Query: 86  QDALKLVTNAFFYWIWQERNGRIFKH 9
             A ++V +   Y IW+ERN R F++
Sbjct: 136 HQAHRMVLSETLYVIWKERNDRKFQN 161


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/86 (33%), Positives = 43/86 (50%)
 Frame = -3

Query: 272  SDICVLCWREAETSQHLFFECTYSKNVWREVMSLTGYVRQNPTTWQDEIQWLIQKTSGNG 93
            S  C +C    E+  HLFF C+ ++ +W  ++   G  R +P  W  E+ W+I+ T G G
Sbjct: 1321 SSDCSICNCADESINHLFFNCSGTREIWGNILDWLGR-RHDPREWDMELAWIIENTKGKG 1379

Query: 92   CKQDALKLVTNAFFYWIWQERNGRIF 15
             K   LK+ T    Y +W  RN   F
Sbjct: 1380 WKSALLKMATAETVYNVWHYRNSMCF 1405


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/86 (33%), Positives = 43/86 (50%)
 Frame = -3

Query: 272  SDICVLCWREAETSQHLFFECTYSKNVWREVMSLTGYVRQNPTTWQDEIQWLIQKTSGNG 93
            S  C +C    E+  HLFF C+ ++ +W  ++   G  R +P  W  E+ W+I+ T G G
Sbjct: 1204 SSDCSICNCADESINHLFFNCSGTREIWGNILDWLGR-RHDPREWDMELAWIIENTKGKG 1262

Query: 92   CKQDALKLVTNAFFYWIWQERNGRIF 15
             K   LK+ T    Y +W  RN   F
Sbjct: 1263 WKSALLKMATAETVYNVWHYRNSMCF 1288


>ref|XP_002447028.1| hypothetical protein SORBIDRAFT_06g027160 [Sorghum bicolor]
            gi|241938211|gb|EES11356.1| hypothetical protein
            SORBIDRAFT_06g027160 [Sorghum bicolor]
          Length = 1400

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
 Frame = -3

Query: 263  CVLCWREAETSQHLFFECTYSKNVWREVMSLTGYVRQNPTTW---QDEIQWLIQK-TSGN 96
            C LC R  ET+ HLF EC +S+ +W +V + TG V   P+ W    D  QW +    S N
Sbjct: 1267 CQLCVRNLETTSHLFQECKFSRMIWDKVSTWTGAVNLKPSNWGCIDDMEQWFVNMGNSNN 1326

Query: 95   GCKQDALK--LVTNAFFYW-IWQERNGRIFKH 9
               +D ++  ++   +  W IW+ERN R+F +
Sbjct: 1327 NEVRDGIRSIVILTIWEIWKIWRERNNRVFNN 1358