BLASTX nr result

ID: Coptis23_contig00015003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00015003
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|2...   308   1e-81
ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-lik...   306   6e-81
ref|XP_003527964.1| PREDICTED: transcription factor LAF1-like [G...   269   8e-70
ref|XP_002300949.1| predicted protein [Populus trichocarpa] gi|2...   269   1e-69
ref|XP_003522557.1| PREDICTED: uncharacterized protein LOC100817...   264   3e-68

>ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|222856923|gb|EEE94470.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  308 bits (789), Expect = 1e-81
 Identities = 177/338 (52%), Positives = 218/338 (64%), Gaps = 14/338 (4%)
 Frame = -1

Query: 996 MEESAGGSSNDDAK-TCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRL 820
           MEES  G+S+DDAK T CPRGHWRPAED+KLRQLVEQYG QNWNSIAEKLQGRSGKSCRL
Sbjct: 1   MEESLAGNSSDDAKSTACPRGHWRPAEDDKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRL 60

Query: 819 RWFNQLDPRINRKPFTXXXXERLLAAHRVHGNKWALIARLFPGRTDNSVKNHWHVIMARR 640
           RWFNQLDPRINR+PF+    ERLLAAHR+HGNKWALIARLFPGRTDN+VKNHWHVIMARR
Sbjct: 61  RWFNQLDPRINRRPFSEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARR 120

Query: 639 QRERSKLYGKRSSHDFFHSVTGTTTSNSFPLMSLTTHGEYYSKESRESSTILEFRKNYKD 460
           QRE+SKL GKRS  D   +++ +  +NS           + S+   + S +LEFR   KD
Sbjct: 121 QREQSKLCGKRSYQD---NLSESNATNSSHAGKSRAQDVFNSRIGFDDSRVLEFRNPGKD 177

Query: 459 EVFQASPSN---SWHCSFPGT--STTNSTPLKIFGTGQRDSFSTNSSFCITERDXXXXXX 295
            +   SPS    SW+ + P T  ++ NS+ + +     RD++  +S FC TE        
Sbjct: 178 RILSISPSGSSPSWNFA-PSTIAASNNSSSVDLSRREGRDNYFNSSLFCTTESSKLISDQ 236

Query: 294 XXXXXXXXXXXXGA------AGINKYNKVVHHPY-SCSSIADAYGGSGMIKSDLVRFGDK 136
                       G+       G+  Y +VV  P+ S   + D Y   GMIK +L    + 
Sbjct: 237 PIYRYYTNSSVCGSYRSSSIFGLPNYRRVVPSPFGSYLKLGDDYENHGMIKKELASCHNS 296

Query: 135 LATQSSRLRVTTQQEQGD-ESIKHKEVPFIDFLGVGIS 25
            +T ++    +  QE+GD ESIKHK+ PFIDFLGVGIS
Sbjct: 297 -STLNNLRATSNHQEKGDHESIKHKDAPFIDFLGVGIS 333


>ref|XP_002278632.2| PREDICTED: transcriptional activator Myb-like [Vitis vinifera]
           gi|302142744|emb|CBI19947.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  306 bits (784), Expect = 6e-81
 Identities = 176/326 (53%), Positives = 208/326 (63%), Gaps = 10/326 (3%)
 Frame = -1

Query: 972 SNDDAKTCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLRWFNQLDPR 793
           S+DDAKTC PRGHWRPAEDEKLRQLVE+YG QNWNSIAEKLQGRSGKSCRLRWFNQLDPR
Sbjct: 4   SSDDAKTC-PRGHWRPAEDEKLRQLVEEYGAQNWNSIAEKLQGRSGKSCRLRWFNQLDPR 62

Query: 792 INRKPFTXXXXERLLAAHRVHGNKWALIARLFPGRTDNSVKNHWHVIMARRQRERSKLYG 613
           INRKPFT    ERLLAAHR+HGNKWALI+RLFPGRTDN+VKNHWHVIMAR+QRE+SKL G
Sbjct: 63  INRKPFTEEEEERLLAAHRIHGNKWALISRLFPGRTDNAVKNHWHVIMARKQREQSKLCG 122

Query: 612 KRSSHDFFHSVTGTTTSNSFPLMSLTTHGEYYSKESR-ESSTILEFRKNYKDEVFQASPS 436
           KRS  D        T+SN F      +  + YS  +R E+S + EF    K+ +F  SPS
Sbjct: 123 KRSYKDVLSD--SNTSSNGF--RGSNSRSQQYSSANRLENSRLFEFLNPNKEGIFSISPS 178

Query: 435 N---SW-HCSFPGTSTTNSTPLKIFGTGQRDSFSTNSSFCITERD-----XXXXXXXXXX 283
           +   SW        +T NS+   +   G RD F++ SS  I +                 
Sbjct: 179 SSSPSWTFARSISKATNNSSSTDLLRRGGRDHFNSCSSDGIMDSQNSLDRSLYRYFSNSS 238

Query: 282 XXXXXXXXGAAGINKYNKVVHHPYSCSSIADAYGGSGMIKSDLVRFGDKLATQSSRLRVT 103
                    A G   Y +VV  P   S + D +   GM+K + V FGD   T  +++ +T
Sbjct: 239 AYGGYRTSTAFGFPNYKRVVSGPVGYSKLGDPH---GMLKREFVNFGDNSPT-FAKMIMT 294

Query: 102 TQQEQGDESIKHKEVPFIDFLGVGIS 25
            QQEQ DESIK K +PFIDFLGVGIS
Sbjct: 295 NQQEQEDESIKQKNIPFIDFLGVGIS 320


>ref|XP_003527964.1| PREDICTED: transcription factor LAF1-like [Glycine max]
          Length = 331

 Score =  269 bits (688), Expect = 8e-70
 Identities = 164/342 (47%), Positives = 203/342 (59%), Gaps = 19/342 (5%)
 Frame = -1

Query: 996 MEESAGGSSNDDAKTCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLR 817
           ME+S+ G   +D KTC PRGHWRPAEDEKLRQLVEQYG QNWNSIAEKLQGRSGKSCRLR
Sbjct: 1   MEDSSAG---EDTKTC-PRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLR 56

Query: 816 WFNQLDPRINRKPFTXXXXERLLAAHRVHGNKWALIARLFPGRTDNSVKNHWHVIMARRQ 637
           WFNQLDPRINR+PFT    ERLLAAHR+HGNKWALIARLFPGRTDN+VKNHWHVIMAR+Q
Sbjct: 57  WFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQ 116

Query: 636 RERSKLYGKRSSHDFFHSVTGTTTSNSFPLMSLTTHGEYYSKESRESSTILEFRKNYKDE 457
           RE+SKL GKRS  D ++    T         S      + ++   E+    +FR   K+ 
Sbjct: 117 REQSKLCGKRSFQDVYNDSNNTFLEKRTTPQSHHQDMLFSTRFGLENGIFFDFRSLDKN- 175

Query: 456 VFQASPSNSWHCSFPGTSTTNSTPLKIFGT-------GQRDSF---STNSSFCITERDXX 307
             +   +N+ H     T ++NS     FG+       G RD+F   S +SS  ++E    
Sbjct: 176 --KDDSNNNNHRIVSDTPSSNSLASWNFGSVPTTTTKGARDNFNNTSCSSSVYLSE---- 229

Query: 306 XXXXXXXXXXXXXXXXGAAGINKYNKVVHHPYSCSSIADAYGGSGMIKSDLVRFGDKLAT 127
                            A  +  Y +VV      S+   +    G IK DL+ F D    
Sbjct: 230 CSRSSDRSFLYRIYPNPAFSLPNYKRVVPTSPLISTFLGSSDHDGRIKKDLMSFCDNNTN 289

Query: 126 QSS---RLRVTTQQEQGD------ESIKHKEVPFIDFLGVGI 28
            SS   +L+ +T+++Q         +IK KEVPFIDFLGVG+
Sbjct: 290 SSSTFTKLKASTEKDQQQTNEDETNNIKPKEVPFIDFLGVGV 331


>ref|XP_002300949.1| predicted protein [Populus trichocarpa] gi|222842675|gb|EEE80222.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  269 bits (687), Expect = 1e-69
 Identities = 159/326 (48%), Positives = 184/326 (56%), Gaps = 1/326 (0%)
 Frame = -1

Query: 999 MMEESAGGSSNDDAK-TCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCR 823
           M E S  G+S+DDAK T CPRGHWRPAED+KLRQLVEQYG QNWN IAEKLQGRSGKSCR
Sbjct: 1   MEEYSLAGNSSDDAKSTACPRGHWRPAEDDKLRQLVEQYGAQNWNDIAEKLQGRSGKSCR 60

Query: 822 LRWFNQLDPRINRKPFTXXXXERLLAAHRVHGNKWALIARLFPGRTDNSVKNHWHVIMAR 643
           LRWFNQLDPRINR+PF+    ERLLAAH+VHGNKWALIAR+FPGRTDN+VKNHWHVIMAR
Sbjct: 61  LRWFNQLDPRINRRPFSEEEEERLLAAHQVHGNKWALIARVFPGRTDNAVKNHWHVIMAR 120

Query: 642 RQRERSKLYGKRSSHDFFHSVTGTTTSNSFPLMSLTTHGEYYSKESRESSTILEFRKNYK 463
           +QRE+SKL GKR   D          S+S       T   + S+   E S   EFR   K
Sbjct: 121 KQREQSKLCGKRRYQDSLSD--SNPPSSSSHARKSRTQELFSSRIGFEDSRECEFRNPSK 178

Query: 462 DEVFQASPSNSWHCSFPGTSTTNSTPLKIFGTGQRDSFSTNSSFCITERDXXXXXXXXXX 283
           D  F  SPS+S       + + NS P  +  +    S + +SS                 
Sbjct: 179 DRTFSISPSSS-------SPSWNSPPSTLAASNNWRSSNWSSS----------------- 214

Query: 282 XXXXXXXXGAAGINKYNKVVHHPYSCSSIADAYGGSGMIKSDLVRFGDKLATQSSRLRVT 103
                      G+  Y +VV  P     + D YG  GMIK +L                 
Sbjct: 215 ---------KFGLPNYRRVVPSPLGYLKLGDDYGNHGMIKKEL----------------- 248

Query: 102 TQQEQGDESIKHKEVPFIDFLGVGIS 25
                      HK+VPFIDFLGVGIS
Sbjct: 249 -----------HKDVPFIDFLGVGIS 263


>ref|XP_003522557.1| PREDICTED: uncharacterized protein LOC100817328 [Glycine max]
          Length = 338

 Score =  264 bits (674), Expect = 3e-68
 Identities = 166/348 (47%), Positives = 208/348 (59%), Gaps = 24/348 (6%)
 Frame = -1

Query: 996  MEESAGGSSNDDAKTCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLR 817
            ME+S+ G   +D +TC PRGHWRPAEDEKLRQLVEQYG QNWNSIAEKLQGRSGKSCRLR
Sbjct: 1    MEDSSAG---EDTRTC-PRGHWRPAEDEKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRLR 56

Query: 816  WFNQLDPRINRKPFTXXXXERLLAAHRVHGNKWALIARLFPGRTDNSVKNHWHVIMARRQ 637
            WFNQLDPRINR+PFT    ERLLAAHR+HGNKWALIARLFPGRTDN+VKNHWHVIMAR+Q
Sbjct: 57   WFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQ 116

Query: 636  RERSKLYGKRSSHDFFHSVTGT-----TTSNSF---PLMSLT----THGEYYSKESRESS 493
            RE+SKL GKRS  D ++    T     TT  S     L S T     +G ++   S +++
Sbjct: 117  REQSKLCGKRSFQDVYNDSNNTFLEKRTTPQSHHQDMLFSTTRFGLENGRFFDFRSLDNN 176

Query: 492  TILEFRKNYKDEVFQASPSNSWHCSFPGTSTTNSTPLKIFGTGQRDSFSTNSSFCITERD 313
               +       +   ++   SW  +F    TT ST  K    G RD F+T+ S  +   +
Sbjct: 177  KDDDNNYRIVSDTTSSTSLASW--NFASVPTTTSTTTK----GARDYFNTSRSSSVYLSE 230

Query: 312  XXXXXXXXXXXXXXXXXXGAAGINKYNKVV-HHPYSCSSIADAYGGSGMIKSDLVRFGDK 136
                               A  +  Y +VV   P+     +  +    +IK DL+ F D 
Sbjct: 231  --CSRSSDRSFLYRIYPNPAFSLPNYKRVVPTSPFRTFLGSSDHHDGWIIKRDLMSFCDN 288

Query: 135  LATQS----SRLRVTT----QQEQGDE---SIKHKEVPFIDFLGVGIS 25
                S    S+L+ +T    QQ+Q +E   +++ KEVPFIDFLGVG+S
Sbjct: 289  NNNNSSSTFSKLKASTEKDHQQQQTNEDATNVEPKEVPFIDFLGVGVS 336


Top