BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014999
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like...   159   3e-37
ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago...   149   3e-34
ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like...   142   3e-32
ref|XP_003571285.1| PREDICTED: flap endonuclease GEN-like 2-like...   136   2e-30

>ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
           gi|297741051|emb|CBI31782.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/100 (79%), Positives = 88/100 (88%), Gaps = 1/100 (1%)
 Frame = -3

Query: 297 VCIDLSCWIVQLQNVCKSHSSIKDKIYLRSLFHRLRALLALNCSLVLVADGSIPAIKLST 118
           VCIDLSCW+VQLQNV KSH+SIKDK+YL+ LFHRLRAL+ALNCSL+ V DGSIPAIKL+T
Sbjct: 27  VCIDLSCWMVQLQNVNKSHASIKDKLYLKGLFHRLRALIALNCSLLFVTDGSIPAIKLAT 86

Query: 117 YRRRLGSGSEATRDEKKSQKL-SLPRNMGSEFSCMIKEAK 1
           YRRRL SG+E TRDE  S  + SL RNMGSEFSCMIKEAK
Sbjct: 87  YRRRLNSGTEVTRDETNSHNVPSLRRNMGSEFSCMIKEAK 126


>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
           predicted protein [Populus trichocarpa]
          Length = 541

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/101 (76%), Positives = 86/101 (85%), Gaps = 2/101 (1%)
 Frame = -3

Query: 297 VCIDLSCWIVQLQNVCKSHSS-IKDKIYLRSLFHRLRALLALNCSLVLVADGSIPAIKLS 121
           VCIDLSCW+VQLQNV K+H   +KDK Y+R+LFHRLRAL+ALNCSL+ VADGSIPAIKL+
Sbjct: 27  VCIDLSCWMVQLQNVNKTHCGLVKDKPYIRNLFHRLRALIALNCSLIFVADGSIPAIKLA 86

Query: 120 TYRRRLGSGSEATRDEKKSQK-LSLPRNMGSEFSCMIKEAK 1
           TYRRRL  G E T+DE  SQK  SL RNMGSEFSCMIKEAK
Sbjct: 87  TYRRRLNLGLEVTQDETNSQKACSLRRNMGSEFSCMIKEAK 127


>ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 571

 Score =  149 bits (375), Expect = 3e-34
 Identities = 71/100 (71%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
 Frame = -3

Query: 297 VCIDLSCWIVQLQNVCKSHSSIKDKIYLRSLFHRLRALLALNCSLVLVADGSIPAIKLST 118
           VC+DLSCW+VQLQNVCKSH+ +K+K++LR LFHRLRAL+ALNC++V V+DGSIPAIKLST
Sbjct: 27  VCVDLSCWMVQLQNVCKSHACLKEKVHLRGLFHRLRALIALNCTVVFVSDGSIPAIKLST 86

Query: 117 YRRRLGSGSEATRDEKKSQK-LSLPRNMGSEFSCMIKEAK 1
           YRRRL +G E  + E   QK  SL RN+GSEFSCMI EAK
Sbjct: 87  YRRRLNNGKEVAQKETNLQKTTSLRRNLGSEFSCMISEAK 126


>ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
          Length = 588

 Score =  142 bits (358), Expect = 3e-32
 Identities = 71/102 (69%), Positives = 84/102 (82%), Gaps = 3/102 (2%)
 Frame = -3

Query: 297 VCIDLSCWIVQLQNVCKSHSSIKDKIYLRSLFHRLRALLALNCSLVLVADGSIPAIKLST 118
           VC+DLSCW+VQL +V KSH+ +K+K+YLR LFHRLRAL+ALNCSL+ V+DG+IPAIKLST
Sbjct: 27  VCVDLSCWMVQLHSVSKSHACVKEKVYLRGLFHRLRALIALNCSLIFVSDGAIPAIKLST 86

Query: 117 YRRRLGSGSE--ATRDEKKSQK-LSLPRNMGSEFSCMIKEAK 1
           YRRRL  G E    ++E   QK  SL RNMGSEFSCMIKEAK
Sbjct: 87  YRRRLNVGKEVQVAQNETNLQKATSLQRNMGSEFSCMIKEAK 128


>ref|XP_003571285.1| PREDICTED: flap endonuclease GEN-like 2-like [Brachypodium
           distachyon]
          Length = 706

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/100 (67%), Positives = 82/100 (82%), Gaps = 1/100 (1%)
 Frame = -3

Query: 297 VCIDLSCWIVQLQNVCKSHSSIKDKIYLRSLFHRLRALLALNCSLVLVADGSIPAIKLST 118
           VC+DLSCW+VQ  +  +S + +KDK+YL++LFHR+RALLALNCSL+ V DG+IP++KL+T
Sbjct: 27  VCVDLSCWLVQFCSANRSPAFVKDKVYLKNLFHRIRALLALNCSLIFVTDGAIPSVKLAT 86

Query: 117 YRRRLGSGSEATRDEKKSQKL-SLPRNMGSEFSCMIKEAK 1
           YRRRLGS SEAT DE   Q L SL RN GSEFS MIKEAK
Sbjct: 87  YRRRLGSNSEATHDETNPQPLTSLRRNKGSEFSRMIKEAK 126