BLASTX nr result

ID: Coptis23_contig00014991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014991
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274877.2| PREDICTED: uncharacterized protein LOC100251...    75   6e-26
ref|XP_004147718.1| PREDICTED: uncharacterized protein LOC101206...    69   2e-20
ref|XP_004167779.1| PREDICTED: uncharacterized LOC101206313 [Cuc...    69   2e-20
ref|XP_003552682.1| PREDICTED: uncharacterized protein LOC100782...    71   1e-19
ref|XP_002309044.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-18

>ref|XP_002274877.2| PREDICTED: uncharacterized protein LOC100251629 [Vitis vinifera]
          Length = 599

 Score = 75.1 bits (183), Expect(2) = 6e-26
 Identities = 39/68 (57%), Positives = 43/68 (63%)
 Frame = +2

Query: 230 ELTDSNTEIXXXXXXXXXXXXXXXXKNKMEPKTSKKVAPNNFPSNVRSLLSTGILDDVPV 409
           +L +SN +                 K K E K SKKV PNNFPSNVRSLLSTG+LD VPV
Sbjct: 421 KLVESNADALISTAQITASGSETVSKKKEEQKLSKKVPPNNFPSNVRSLLSTGMLDGVPV 480

Query: 410 KYIAWSRE 433
           KYIAWSRE
Sbjct: 481 KYIAWSRE 488



 Score = 67.4 bits (163), Expect(2) = 6e-26
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +1

Query: 1   VGHSFNKGDSNTISFSGFQDEPE-ANPSGMLISNYDLMLAQSSVQPSEKLNE 153
           +GHS+NKG+SN ISF GF D+ +  NPSG L+ +YDL++ Q SVQ SE LNE
Sbjct: 368 IGHSYNKGESNIISFGGFHDDDDDTNPSGRLVCSYDLLMGQPSVQRSEALNE 419


>ref|XP_004147718.1| PREDICTED: uncharacterized protein LOC101206313 [Cucumis sativus]
          Length = 582

 Score = 69.3 bits (168), Expect(2) = 2e-20
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = +2

Query: 239 DSNTEIXXXXXXXXXXXXXXXXKNKMEPKTSKKVAPNNFPSNVRSLLSTGILDDVPVKYI 418
           D N E+                K+K EP+ SKKV PN+FPSNV+SLLSTG+LD VPVKY+
Sbjct: 407 DPNVEVNINGAIKVDGKIDTNSKSK-EPRMSKKVPPNSFPSNVKSLLSTGMLDGVPVKYV 465

Query: 419 AWSRE 433
           +WSRE
Sbjct: 466 SWSRE 470



 Score = 54.7 bits (130), Expect(2) = 2e-20
 Identities = 28/49 (57%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
 Frame = +1

Query: 1   VGHSFNKGDSNTISFSGFQDEPEA-NPSGMLISNYDLMLA-QSSVQPSE 141
           + H+++KG+SNTISF GF DE    NPSG +IS+YDL++A Q+S Q SE
Sbjct: 350 MAHNYHKGESNTISFGGFDDENGTDNPSGGIISSYDLLMANQASAQASE 398


>ref|XP_004167779.1| PREDICTED: uncharacterized LOC101206313 [Cucumis sativus]
          Length = 561

 Score = 69.3 bits (168), Expect(2) = 2e-20
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = +2

Query: 239 DSNTEIXXXXXXXXXXXXXXXXKNKMEPKTSKKVAPNNFPSNVRSLLSTGILDDVPVKYI 418
           D N E+                K+K EP+ SKKV PN+FPSNV+SLLSTG+LD VPVKY+
Sbjct: 386 DPNVEVNINGAIKVDGKIDTNSKSK-EPRMSKKVPPNSFPSNVKSLLSTGMLDGVPVKYV 444

Query: 419 AWSRE 433
           +WSRE
Sbjct: 445 SWSRE 449



 Score = 54.7 bits (130), Expect(2) = 2e-20
 Identities = 28/49 (57%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
 Frame = +1

Query: 1   VGHSFNKGDSNTISFSGFQDEPEA-NPSGMLISNYDLMLA-QSSVQPSE 141
           + H+++KG+SNTISF GF DE    NPSG +IS+YDL++A Q+S Q SE
Sbjct: 329 MAHNYHKGESNTISFGGFDDENGTDNPSGGIISSYDLLMANQASAQASE 377


>ref|XP_003552682.1| PREDICTED: uncharacterized protein LOC100782217 [Glycine max]
          Length = 582

 Score = 70.9 bits (172), Expect(2) = 1e-19
 Identities = 37/68 (54%), Positives = 44/68 (64%)
 Frame = +2

Query: 230 ELTDSNTEIXXXXXXXXXXXXXXXXKNKMEPKTSKKVAPNNFPSNVRSLLSTGILDDVPV 409
           +LT++NTE                 KNK EPKT+KK   NNFPSNV+SLLSTGI D V V
Sbjct: 404 DLTETNTESLVNSIPKPNTKNDIVVKNK-EPKTTKKAPTNNFPSNVKSLLSTGIFDGVQV 462

Query: 410 KYIAWSRE 433
           KY++WSRE
Sbjct: 463 KYVSWSRE 470



 Score = 50.1 bits (118), Expect(2) = 1e-19
 Identities = 24/52 (46%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +1

Query: 1   VGHSFNKGDSNTISFSGFQDEPEANPSGMLISNYDLML-AQSSVQPSEKLNE 153
           VG + +KG S++ISF GF D+PE N  G +IS YDL++  Q+S Q  +  N+
Sbjct: 353 VGQNHHKGQSSSISFGGFHDDPEPNTPGGIISGYDLLIGGQNSAQGLDSQND 404


>ref|XP_002309044.1| predicted protein [Populus trichocarpa] gi|222855020|gb|EEE92567.1|
           predicted protein [Populus trichocarpa]
          Length = 467

 Score = 68.2 bits (165), Expect(2) = 1e-18
 Identities = 35/68 (51%), Positives = 42/68 (61%)
 Frame = +2

Query: 230 ELTDSNTEIXXXXXXXXXXXXXXXXKNKMEPKTSKKVAPNNFPSNVRSLLSTGILDDVPV 409
           EL  SN +                 K K + KT+KK+  NNFPSNVRSLLSTG+LD VPV
Sbjct: 353 ELVKSNVDTRVSALHVATSRTDNVSKKKDDIKTAKKLPSNNFPSNVRSLLSTGMLDGVPV 412

Query: 410 KYIAWSRE 433
           KY+AWS+E
Sbjct: 413 KYVAWSQE 420



 Score = 49.7 bits (117), Expect(2) = 1e-18
 Identities = 25/51 (49%), Positives = 35/51 (68%)
 Frame = +1

Query: 1   VGHSFNKGDSNTISFSGFQDEPEANPSGMLISNYDLMLAQSSVQPSEKLNE 153
           +G S NKG+S  ISF G+ D+ + N SG L S+Y+L++AQ S Q SE  N+
Sbjct: 302 IGQSRNKGESTIISFGGYDDD-DTNCSGKLTSSYELLMAQPSFQRSEVRND 351


Top