BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014985
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26820.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V...    96   2e-18
emb|CBI26821.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-li...    90   2e-16
ref|XP_002315849.1| rna-dependent RNA polymerase [Populus tricho...    87   1e-15

>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 41/63 (65%), Positives = 53/63 (84%)
 Frame = +2

Query: 2   FKVNSLVQNGLLAGPTLDSAFYSLVNPQYVPIAHIERALERLCQLKDCCYEPIRWLKEQY 181
           FK+N+LVQNG L+GPTLD++F+ LV+P+  PI+ IE ALE+L  LK+CCYEP+RWL EQY
Sbjct: 240 FKINTLVQNGCLSGPTLDTSFFRLVDPERFPISFIEHALEKLYHLKECCYEPVRWLSEQY 299

Query: 182 LTY 190
            TY
Sbjct: 300 RTY 302


>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
          Length = 1121

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 41/63 (65%), Positives = 53/63 (84%)
 Frame = +2

Query: 2   FKVNSLVQNGLLAGPTLDSAFYSLVNPQYVPIAHIERALERLCQLKDCCYEPIRWLKEQY 181
           FK+N+LVQNG L+GPTLD++F+ LV+P+  PI+ IE ALE+L  LK+CCYEP+RWL EQY
Sbjct: 276 FKINTLVQNGCLSGPTLDTSFFRLVDPERFPISFIEHALEKLYHLKECCYEPVRWLSEQY 335

Query: 182 LTY 190
            TY
Sbjct: 336 RTY 338


>emb|CBI26821.3| unnamed protein product [Vitis vinifera]
          Length = 943

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/63 (61%), Positives = 51/63 (80%)
 Frame = +2

Query: 2   FKVNSLVQNGLLAGPTLDSAFYSLVNPQYVPIAHIERALERLCQLKDCCYEPIRWLKEQY 181
           FK+N+LVQNG L+GPTLD+ F+  V+PQ + I+ IE ALE+L  L++CCYEP+RWL EQY
Sbjct: 241 FKINTLVQNGCLSGPTLDTNFFRWVDPQRINISFIEHALEKLYYLEECCYEPVRWLHEQY 300

Query: 182 LTY 190
            TY
Sbjct: 301 RTY 303


>ref|XP_002281315.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Vitis vinifera]
          Length = 1109

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/63 (61%), Positives = 51/63 (80%)
 Frame = +2

Query: 2   FKVNSLVQNGLLAGPTLDSAFYSLVNPQYVPIAHIERALERLCQLKDCCYEPIRWLKEQY 181
           FK+N+LVQNG L+GPTLD+ F+  V+PQ + I+ IE ALE+L  L++CCYEP+RWL EQY
Sbjct: 274 FKINTLVQNGCLSGPTLDTNFFRWVDPQRINISFIEHALEKLYYLEECCYEPVRWLHEQY 333

Query: 182 LTY 190
            TY
Sbjct: 334 RTY 336


>ref|XP_002315849.1| rna-dependent RNA polymerase [Populus trichocarpa]
           gi|222864889|gb|EEF02020.1| rna-dependent RNA polymerase
           [Populus trichocarpa]
          Length = 1102

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/68 (58%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
 Frame = +2

Query: 2   FKVNSLVQNGLLAGPTLDSAFYSLVNPQYVPIAH--IERALERLCQLKDCCYEPIRWLKE 175
           FKVNSLVQ+G L GP LD+ F+ L+NP  + IAH  I+ ALE+L  LK+CCY+P RWL+E
Sbjct: 279 FKVNSLVQHGCLPGPALDARFFRLINPSKIRIAHAYIQHALEKLSHLKECCYDPARWLRE 338

Query: 176 QYLTYRTS 199
           QY  Y T+
Sbjct: 339 QYQKYLTT 346