BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014983
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasilie...   165   1e-38
gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatr...   163   4e-38
ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [S...   162   7e-38
ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E...   162   9e-38
ref|XP_002278114.1| PREDICTED: small nuclear ribonucleoprotein E...   162   9e-38

>gb|ADR71258.1| small nuclear ribonucleoprotein E [Hevea brasiliensis]
          Length = 88

 Score =  165 bits (417), Expect = 1e-38
 Identities = 82/88 (93%), Positives = 86/88 (97%)
 Frame = -2

Query: 496 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFQQKDVRIEGRIIGFDEYMNLVLDDAEEV 317
           MA+T+VQRIMTQPINLIFRFLQSKARIQIWLF+QKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDMRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 316 NIKKKTRSSLGRILLKGDNITLMQNTGK 233
           NIKKKTR SLGRILLKGDNITLM NTGK
Sbjct: 61  NIKKKTRKSLGRILLKGDNITLMMNTGK 88


>gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide [Jatropha curcas]
          Length = 88

 Score =  163 bits (412), Expect = 4e-38
 Identities = 80/88 (90%), Positives = 86/88 (97%)
 Frame = -2

Query: 496 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFQQKDVRIEGRIIGFDEYMNLVLDDAEEV 317
           MA+T+VQRIMTQPINLIFRFLQSKARIQIWLF+QKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 316 NIKKKTRSSLGRILLKGDNITLMQNTGK 233
           N+KKKTR SLGRILLKGDNITLM N+GK
Sbjct: 61  NVKKKTRKSLGRILLKGDNITLMMNSGK 88


>ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950 [Sorghum bicolor]
           gi|241926921|gb|EES00066.1| hypothetical protein
           SORBIDRAFT_03g001950 [Sorghum bicolor]
          Length = 88

 Score =  162 bits (410), Expect = 7e-38
 Identities = 79/88 (89%), Positives = 85/88 (96%)
 Frame = -2

Query: 496 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFQQKDVRIEGRIIGFDEYMNLVLDDAEEV 317
           MA+T+VQRIMTQPINLIFRFLQSKARIQIWLF+QKD+RIEGRIIGFDEYMNLVLDDAEE+
Sbjct: 1   MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI 60

Query: 316 NIKKKTRSSLGRILLKGDNITLMQNTGK 233
           N+KK TR SLGRILLKGDNITLM NTGK
Sbjct: 61  NVKKNTRKSLGRILLKGDNITLMMNTGK 88


>ref|XP_003542280.1| PREDICTED: small nuclear ribonucleoprotein E-like [Glycine max]
           gi|255627911|gb|ACU14300.1| unknown [Glycine max]
          Length = 88

 Score =  162 bits (409), Expect = 9e-38
 Identities = 79/88 (89%), Positives = 86/88 (97%)
 Frame = -2

Query: 496 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFQQKDVRIEGRIIGFDEYMNLVLDDAEEV 317
           MA+T+VQR+MTQPINLIFRFLQSKARIQIWLF+QKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 316 NIKKKTRSSLGRILLKGDNITLMQNTGK 233
           NIKKK+R +LGRILLKGDNITLM NTGK
Sbjct: 61  NIKKKSRKTLGRILLKGDNITLMMNTGK 88


>ref|XP_002278114.1| PREDICTED: small nuclear ribonucleoprotein E [Vitis vinifera]
           gi|297734216|emb|CBI15463.3| unnamed protein product
           [Vitis vinifera]
          Length = 88

 Score =  162 bits (409), Expect = 9e-38
 Identities = 79/88 (89%), Positives = 85/88 (96%)
 Frame = -2

Query: 496 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFQQKDVRIEGRIIGFDEYMNLVLDDAEEV 317
           MATT+VQRIMTQPINLIFRFLQSKARIQIWLF+QKD+RIEGRIIGFDEYMNLVLDDAEEV
Sbjct: 1   MATTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60

Query: 316 NIKKKTRSSLGRILLKGDNITLMQNTGK 233
           N+KK T+ +LGRILLKGDNITLM NTGK
Sbjct: 61  NVKKNTKKTLGRILLKGDNITLMMNTGK 88