BLASTX nr result

ID: Coptis23_contig00014976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014976
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278892.1| PREDICTED: proline synthase co-transcribed b...   417   e-114
emb|CAN80917.1| hypothetical protein VITISV_024616 [Vitis vinifera]   415   e-114
ref|XP_002263767.2| PREDICTED: proline synthase co-transcribed b...   409   e-112
emb|CBI23205.3| unnamed protein product [Vitis vinifera]              409   e-112
ref|XP_002518437.1| proline synthetase associated protein, putat...   401   e-109

>ref|XP_002278892.1| PREDICTED: proline synthase co-transcribed bacterial homolog
           protein [Vitis vinifera] gi|297737470|emb|CBI26671.3|
           unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  417 bits (1071), Expect = e-114
 Identities = 206/245 (84%), Positives = 222/245 (90%)
 Frame = +3

Query: 66  MAAPAMEGAVVTALRTILYRVQSAAEKSARKSDQVRVVAVSKTKPVSLIRQVYDAGHRCF 245
           MAAPAMEG  VTALR+ + RV+ AAE+S R+SDQVRVVAVSKTKPVSLIRQVYDAGHRCF
Sbjct: 1   MAAPAMEGLAVTALRSAMLRVRQAAERSGRRSDQVRVVAVSKTKPVSLIRQVYDAGHRCF 60

Query: 246 GENYVQEFIDKAPQLPDDIEWHFIGNLQSNKVKPLLTAVPNLAMVESVDDEKIANYLDRY 425
           GENYVQE  +KAPQLP+DIEWHFIG+LQSNKVKPLL AVPNLAMVE VD+EKIAN LDR 
Sbjct: 61  GENYVQEINEKAPQLPEDIEWHFIGHLQSNKVKPLLAAVPNLAMVEGVDNEKIANQLDRV 120

Query: 426 IASFGRKPLKVLVQVNTSGEASKSGVEPSSCVELAKHVKMGCPNLEFSGLMTIGMLDYTS 605
           ++   RKPLKVLVQVNTSGE SKSGVEPS CVELAKHVK+GCPNLEFSGLMTIGM DY+S
Sbjct: 121 VSGIRRKPLKVLVQVNTSGEVSKSGVEPSGCVELAKHVKLGCPNLEFSGLMTIGMPDYSS 180

Query: 606 TPENFKTLSNCRAEVCKALGMTEEQCELSMGMSGDFEKAIEMGSTNVRIGSTIFGPREYP 785
           TPENF+ L NCR EVCKALGM EEQCELSMGMSGDFE+AIEMGSTNVRIGSTIFGPREYP
Sbjct: 181 TPENFRRLLNCRIEVCKALGMAEEQCELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYP 240

Query: 786 KKQGN 800
           KK+ N
Sbjct: 241 KKEQN 245


>emb|CAN80917.1| hypothetical protein VITISV_024616 [Vitis vinifera]
          Length = 245

 Score =  415 bits (1067), Expect = e-114
 Identities = 205/245 (83%), Positives = 222/245 (90%)
 Frame = +3

Query: 66  MAAPAMEGAVVTALRTILYRVQSAAEKSARKSDQVRVVAVSKTKPVSLIRQVYDAGHRCF 245
           MAAPA+EG  VTALR+ + RV+ AAE+S R+SDQVRVVAVSKTKPVSLIRQVYDAGHRCF
Sbjct: 1   MAAPAVEGLAVTALRSAMLRVRQAAERSGRRSDQVRVVAVSKTKPVSLIRQVYDAGHRCF 60

Query: 246 GENYVQEFIDKAPQLPDDIEWHFIGNLQSNKVKPLLTAVPNLAMVESVDDEKIANYLDRY 425
           GENYVQE  +KAPQLP+DIEWHFIG+LQSNKVKPLL AVPNLAMVE VD+EKIAN LDR 
Sbjct: 61  GENYVQEINEKAPQLPEDIEWHFIGHLQSNKVKPLLAAVPNLAMVEGVDNEKIANQLDRV 120

Query: 426 IASFGRKPLKVLVQVNTSGEASKSGVEPSSCVELAKHVKMGCPNLEFSGLMTIGMLDYTS 605
           ++   RKPLKVLVQVNTSGE SKSGVEPS CVELAKHVK+GCPNLEFSGLMTIGM DY+S
Sbjct: 121 VSGIRRKPLKVLVQVNTSGEVSKSGVEPSGCVELAKHVKLGCPNLEFSGLMTIGMPDYSS 180

Query: 606 TPENFKTLSNCRAEVCKALGMTEEQCELSMGMSGDFEKAIEMGSTNVRIGSTIFGPREYP 785
           TPENF+ L NCR EVCKALGM EEQCELSMGMSGDFE+AIEMGSTNVRIGSTIFGPREYP
Sbjct: 181 TPENFRRLLNCRIEVCKALGMAEEQCELSMGMSGDFEQAIEMGSTNVRIGSTIFGPREYP 240

Query: 786 KKQGN 800
           KK+ N
Sbjct: 241 KKEQN 245


>ref|XP_002263767.2| PREDICTED: proline synthase co-transcribed bacterial homolog
           protein-like [Vitis vinifera]
          Length = 264

 Score =  409 bits (1051), Expect = e-112
 Identities = 198/250 (79%), Positives = 225/250 (90%)
 Frame = +3

Query: 45  KKTDTSKMAAPAMEGAVVTALRTILYRVQSAAEKSARKSDQVRVVAVSKTKPVSLIRQVY 224
           ++ + S MAA AM+G    ALR++L+RVQ AAE+S R   Q+RVVAVSKTK VSLIR+VY
Sbjct: 13  EEAEQSSMAASAMDGVAAAALRSVLHRVQQAAERSGRGPHQIRVVAVSKTKSVSLIREVY 72

Query: 225 DAGHRCFGENYVQEFIDKAPQLPDDIEWHFIGNLQSNKVKPLLTAVPNLAMVESVDDEKI 404
           D+GHRCFGENYVQE I+KAPQLP+DIEWHFIGNLQSNKVKPLLT VPNLA+VE+VDDEKI
Sbjct: 73  DSGHRCFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLTGVPNLAVVETVDDEKI 132

Query: 405 ANYLDRYIASFGRKPLKVLVQVNTSGEASKSGVEPSSCVELAKHVKMGCPNLEFSGLMTI 584
           A+ LDR +A+ GRKPLKV+VQVNTSGE SKSGV+P++CVEL KHV +GCPNLEF GLMTI
Sbjct: 133 ADRLDRMVATIGRKPLKVMVQVNTSGEESKSGVDPAACVELVKHVALGCPNLEFGGLMTI 192

Query: 585 GMLDYTSTPENFKTLSNCRAEVCKALGMTEEQCELSMGMSGDFEKAIEMGSTNVRIGSTI 764
           GMLDYTSTPENFKTL+NCR+EVCK+LG+TEEQCELSMGMSGDFE AIEMGSTNVRIGSTI
Sbjct: 193 GMLDYTSTPENFKTLANCRSEVCKSLGITEEQCELSMGMSGDFELAIEMGSTNVRIGSTI 252

Query: 765 FGPREYPKKQ 794
           FG REYPKKQ
Sbjct: 253 FGAREYPKKQ 262


>emb|CBI23205.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  409 bits (1051), Expect = e-112
 Identities = 198/250 (79%), Positives = 225/250 (90%)
 Frame = +3

Query: 45  KKTDTSKMAAPAMEGAVVTALRTILYRVQSAAEKSARKSDQVRVVAVSKTKPVSLIRQVY 224
           ++ + S MAA AM+G    ALR++L+RVQ AAE+S R   Q+RVVAVSKTK VSLIR+VY
Sbjct: 60  EEAEQSSMAASAMDGVAAAALRSVLHRVQQAAERSGRGPHQIRVVAVSKTKSVSLIREVY 119

Query: 225 DAGHRCFGENYVQEFIDKAPQLPDDIEWHFIGNLQSNKVKPLLTAVPNLAMVESVDDEKI 404
           D+GHRCFGENYVQE I+KAPQLP+DIEWHFIGNLQSNKVKPLLT VPNLA+VE+VDDEKI
Sbjct: 120 DSGHRCFGENYVQEIIEKAPQLPEDIEWHFIGNLQSNKVKPLLTGVPNLAVVETVDDEKI 179

Query: 405 ANYLDRYIASFGRKPLKVLVQVNTSGEASKSGVEPSSCVELAKHVKMGCPNLEFSGLMTI 584
           A+ LDR +A+ GRKPLKV+VQVNTSGE SKSGV+P++CVEL KHV +GCPNLEF GLMTI
Sbjct: 180 ADRLDRMVATIGRKPLKVMVQVNTSGEESKSGVDPAACVELVKHVALGCPNLEFGGLMTI 239

Query: 585 GMLDYTSTPENFKTLSNCRAEVCKALGMTEEQCELSMGMSGDFEKAIEMGSTNVRIGSTI 764
           GMLDYTSTPENFKTL+NCR+EVCK+LG+TEEQCELSMGMSGDFE AIEMGSTNVRIGSTI
Sbjct: 240 GMLDYTSTPENFKTLANCRSEVCKSLGITEEQCELSMGMSGDFELAIEMGSTNVRIGSTI 299

Query: 765 FGPREYPKKQ 794
           FG REYPKKQ
Sbjct: 300 FGAREYPKKQ 309


>ref|XP_002518437.1| proline synthetase associated protein, putative [Ricinus communis]
           gi|223542282|gb|EEF43824.1| proline synthetase
           associated protein, putative [Ricinus communis]
          Length = 270

 Score =  401 bits (1031), Expect = e-109
 Identities = 201/266 (75%), Positives = 224/266 (84%), Gaps = 2/266 (0%)
 Frame = +3

Query: 3   EEEESITITTKNEDKKT--DTSKMAAPAMEGAVVTALRTILYRVQSAAEKSARKSDQVRV 176
           E+ + +  T K E        S MAA AM G    ALR++L RVQ AAE+S R + Q+RV
Sbjct: 6   EQTKKVNPTAKQEQVVVVEPQSDMAA-AMNGVAAAALRSVLQRVQQAAERSGRGAQQIRV 64

Query: 177 VAVSKTKPVSLIRQVYDAGHRCFGENYVQEFIDKAPQLPDDIEWHFIGNLQSNKVKPLLT 356
           VAVSKTKPVSLI QVYDAGHRCFGENYVQE ++KAPQLP+DIEWHFIGNLQSNKVKPLL 
Sbjct: 65  VAVSKTKPVSLIHQVYDAGHRCFGENYVQELVEKAPQLPEDIEWHFIGNLQSNKVKPLLA 124

Query: 357 AVPNLAMVESVDDEKIANYLDRYIASFGRKPLKVLVQVNTSGEASKSGVEPSSCVELAKH 536
           AVPNLA+VESVDD+KIAN+LDR + + GRKPLKVLVQVNTSGE SK GVEP+ CVELAKH
Sbjct: 125 AVPNLAVVESVDDQKIANHLDRAVGNLGRKPLKVLVQVNTSGEESKYGVEPAGCVELAKH 184

Query: 537 VKMGCPNLEFSGLMTIGMLDYTSTPENFKTLSNCRAEVCKALGMTEEQCELSMGMSGDFE 716
           V   CPNLEF GLMTIGMLDY+STPENFKTL+NCR+EVCK LG+ EEQCELSMGMS DFE
Sbjct: 185 VTQSCPNLEFCGLMTIGMLDYSSTPENFKTLANCRSEVCKTLGIPEEQCELSMGMSNDFE 244

Query: 717 KAIEMGSTNVRIGSTIFGPREYPKKQ 794
           +AIEMGSTNVRIGSTIFGPREYPKK+
Sbjct: 245 QAIEMGSTNVRIGSTIFGPREYPKKK 270


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