BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014968
         (1607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   151   5e-34
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   146   2e-32
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   143   1e-31
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-31
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   131   6e-28

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  151 bits (381), Expect = 5e-34
 Identities = 126/427 (29%), Positives = 208/427 (48%), Gaps = 20/427 (4%)
 Frame = +1

Query: 151  SKLPQHILDLIPKKIDTLDDLIRFSCVCKTWRLSALPLLPSNLFNK-PWLIVSYTNEHVS 327
            S+LP  ++++I K +    D +    VC  WR S +P  P++L  + PWL++  +    +
Sbjct: 6    SQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFS-IPKTPNHLPPQLPWLMLPQSQSQSN 64

Query: 328  KNGTACDKTLGFFDLSTRQLYKVDLPEIA-NHRICGSCRGGWLVTVNSFGDIQLIHPFTR 504
            ++  A      FF LST + + ++LPE++   R CGS  G WL+ ++    I LI+P TR
Sbjct: 65   QSRRA------FFSLSTNKFHFLNLPEVSYRKRHCGSSHG-WLMILDDTPTILLINPLTR 117

Query: 505  KVISLAPVTALPGVVSCYYNERQNLVYDVKN-YGSVCTIASNCMREFYIYKAVMLPWA-- 675
              +SL P+++ P V+S  Y++     Y ++N  G   T++   MR+ +I K V+      
Sbjct: 118  AKLSLPPLSSFPNVISFNYSD-IGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLK 176

Query: 676  ---GVVMVIHGLNKMLAFCKVSDENKKWISVQGV---CEGNFNDVTIFKGEFYAVKNNGS 837
                VV+ I      LA+C+  D  K W  V+     CE    DV    G FYAV   G 
Sbjct: 177  DNNFVVIAILNQTDDLAYCRNGD--KSWSLVENARSFCE----DVIFVNGMFYAVNKAGQ 230

Query: 838  VWVVHGGFDTSSTPFVKFVIGQPDNWGYYKKYLVEAKGELFLLDR---VRYPLEPGDDEA 1008
            + +     D+    F++     P   G   +YLV +  EL L+ R   + Y  +  D E 
Sbjct: 231  IVICDISSDSPRVSFME----TPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEP 286

Query: 1009 D---RTLVFSIKKIIEWNGPKFVSVDYIGKDCAVFVGCNDSFACLTSDVPDCKGNSIYFT 1179
                RT+ F + + ++WNGP+++ +  +G D A+F+G N S +   +D   C GN IY+T
Sbjct: 287  HLIYRTIRFEVFR-LDWNGPQWLRMSTLG-DKALFIGENSSLSLSATDFSGCMGNCIYYT 344

Query: 1180 DDFVDGVSNMNNVNIGSILENFVNEPIGRQDIGVWDMTADVFDRL-IYPS--ASKLMNPP 1350
            DD++D               N+ +   G  D+G++ +  +  + L  YP    S L   P
Sbjct: 345  DDYLDA--------------NY-DGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSP 389

Query: 1351 PVWFTTN 1371
            P+W + N
Sbjct: 390  PLWVSPN 396


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  146 bits (368), Expect = 2e-32
 Identities = 126/419 (30%), Positives = 198/419 (47%), Gaps = 10/419 (2%)
 Frame = +1

Query: 145  WSSKLPQHILDLIPKKIDTLDDLIRFSCVCKTWRLSALPLLPSNLFNK-PWLIVSYTNEH 321
            WS   P+ +LD I KK     D +RF  VC  WR S +P  P +L  + PWL++  +  H
Sbjct: 4    WSQLHPE-LLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQPH 61

Query: 322  VSKNGTACDKTLGFFDLSTRQLYKVDLPEIANHRICGSCRGGWLVTVNSFGDIQLIHPFT 501
             +           FF LS  + + + LPE ++ R       GWL+ ++   +I L++P T
Sbjct: 62   HTHRP--------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT 113

Query: 502  RKVISLAPVTALPGVVSCYYNERQNLVYDVKNYGSVCTIASNCMREFYIYKAVM--LPWA 675
            R  + L P++  P VV   + +         + G V T +   MR+ +I K ++   P  
Sbjct: 114  RSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPAN 173

Query: 676  G---VVMVIHGLNKMLAFCKVSDENKKWISVQGVCEGNFNDVTIFKGEFYAVKNNGSVWV 846
            G   + +VI      LA C+ SD++  W  ++   +    DV   +G FYAV   GS+ V
Sbjct: 174  GSDFIAVVILNQTGDLALCRKSDDS--WTFLED-AQSYAEDVIFHRGLFYAVNKYGSIAV 230

Query: 847  VHGGFDTSSTPFVKFVIGQPDNWGYYKKYLVEAKGELFLLDR---VRYPLEPGDDE-ADR 1014
                 D S +     +I  P  +G   +YLVE+  EL L+ R   + Y +EP       R
Sbjct: 231  C----DVSGSSPRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYR 286

Query: 1015 TLVFSIKKIIEWNGPKFVSVDYIGKDCAVFVGCNDSFACLTSDVPDCKGNSIYFTDDFVD 1194
            T  F + + ++   P++  V  +G D A+F+G N S +  + D P CKGN IY+TDD+  
Sbjct: 287  TTRFQVCR-LDLKAPRWEVVSSLG-DRALFLGENLSLSLSSVDFPGCKGNCIYYTDDY-- 342

Query: 1195 GVSNMNNVNIGSILENFVNEPIGRQDIGVWDMTADVFDRLIYPSASKLMNPPPVWFTTN 1371
              S  N   IG           G QD+G++++     + L   S  ++  PPP+W T N
Sbjct: 343  --SEDNYDGIG-----------GEQDLGIFNLEDGSIEPLPC-SHFRIRWPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  143 bits (360), Expect = 1e-31
 Identities = 126/420 (30%), Positives = 198/420 (47%), Gaps = 11/420 (2%)
 Frame = +1

Query: 145  WSSKLPQHILDLIPKKIDTLDDLIRFSCVCKTWRLSALPLLPSNLFNK-PWLIVSYTNEH 321
            WS   P+ +LD I KK     D +RF  VC  WR S +P  P +L  + PWL++  +  H
Sbjct: 4    WSQLHPE-LLDFIAKKFKIYTDYVRFRAVCHNWRAS-VPKTPHHLPTQLPWLMLPQSQPH 61

Query: 322  VSKNGTACDKTLGFFDLSTRQLYKVDLPEIANHRICGSCRGGWLVTVNSFGDIQLIHPFT 501
             +           FF LS  + + + LPE ++ R       GWL+ ++   +I L++P T
Sbjct: 62   HTHRP--------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT 113

Query: 502  RKVISLAPVTALPGVVSCYYNERQNLVYDVKNYGSVCTIASNCMREFYIYKAVM--LPWA 675
            R  + L P++  P VV   + +         + G V T +   MR+ +I K ++   P  
Sbjct: 114  RSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPAN 173

Query: 676  G---VVMVIHGLNKMLAFCKVSDENKKWISVQGVCEGNFNDVTIFKGEFYAVKNNGSVWV 846
            G   + +VI      LA C+ SD++  W  ++   +    DV   +G FYAV   GS+ V
Sbjct: 174  GSDFIAVVILNQTGDLALCRKSDDS--WTFLED-AQSYSEDVIFHRGLFYAVNKYGSIAV 230

Query: 847  VHGGFDTSSTPFVKFVIGQPDNWGYYKKYLVEAKGELFLLDRVRYPLEPGDDEADRT-LV 1023
                 D S +     +I  P  +G   +YLVE+  EL L+   RY     D E D+T L+
Sbjct: 231  C----DVSGSSPRVSIIEMPQQFGGDLQYLVESGEELLLV--TRYLDLTYDVEXDQTSLI 284

Query: 1024 FSIKKI----IEWNGPKFVSVDYIGKDCAVFVGCNDSFACLTSDVPDCKGNSIYFTDDFV 1191
            +   +     ++   P++  V  +G D A+F+G N S +  + D P CKGN IY+TDD+ 
Sbjct: 285  YRTTRFQVCRLDSKAPRWEVVSSLG-DRALFLGENLSLSLSSVDFPGCKGNCIYYTDDY- 342

Query: 1192 DGVSNMNNVNIGSILENFVNEPIGRQDIGVWDMTADVFDRLIYPSASKLMNPPPVWFTTN 1371
               S  N   IG           G QD+G++++     + L   S  ++  PPP+W T N
Sbjct: 343  ---SEDNYDGIG-----------GEQDLGIFNLEDGSIEPLPC-SHFRIRWPPPLWVTPN 387


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  142 bits (358), Expect = 3e-31
 Identities = 134/422 (31%), Positives = 202/422 (47%), Gaps = 15/422 (3%)
 Frame = +1

Query: 151  SKLPQHILDLIPKKIDTLDDLIRFSCVCKTWRLSALPLLPSNLFNK-PWLIVSYTNEHVS 327
            ++LP  ++++I KKI    D + F  VC  W+ S++P  P++L  + PWL++  +  + S
Sbjct: 6    TQLPPELIEIISKKITIYSDYLHFQAVCHAWK-SSIPKTPNHLPPQLPWLLLPQSQSNQS 64

Query: 328  KNGTACDKTLGFFDLSTRQLYKVDLPEIANHRI--CGSCRGGWLVTVNSFGDIQLIHPFT 501
                       FF+LST + + ++LPE A+HR   CGS  G WL+ ++    I +I+P T
Sbjct: 65   SYRA-------FFNLSTYKFHSLNLPE-ASHRKKHCGSSHG-WLIILDDSPSILVINPLT 115

Query: 502  RKVISLAPVTALPGVVSCYYNERQNLVYDVKNYGSVCTIASNCMREFYIYKAVM----LP 669
            R+ I L  +++ P VVS  Y         V   G   T +   MR+ +I K VM    L 
Sbjct: 116  RRKIHLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLE 175

Query: 670  WAG---VVMVIHGLNKMLAFCKVSDENKKWISVQGVCEGNFNDVTIFKGEFYAVKNNGSV 840
              G   V M I      LA+CK  DE   W  V+        DV  F G FYAV   G +
Sbjct: 176  KKGDFFVAMAILCSTGDLAYCKNGDE--CWNIVEN-SRSFSEDVIYFNGLFYAVNKAGQI 232

Query: 841  WV--VHGGFDTSSTPFVKFVIGQPDNWGYYKKYLVEAKGELFLLDRVRYPLEPGDDEADR 1014
             V  V+G     ++P V F I  P   G   +YLV +   L L+ R        D    +
Sbjct: 233  VVCDVNG-----NSPKVSF-IETPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYK 286

Query: 1015 TLVFSIKKIIEWNGPKFVSVDYIGKDCAVFVGCNDSFACLTSDVPDCKGNSIYFTDDFVD 1194
            T  F + K ++ NGP++  V  +G D  +F+G N S A   S +  C G+ IY+TDD+  
Sbjct: 287  TARFEVFK-LDLNGPRWERVTSLG-DMMLFIGENSSLALSASGLSGCMGDCIYYTDDY-- 342

Query: 1195 GVSNMNNVNIGSILENFVNEPIGRQDIGVWDMTADVFDRL-IYP--SASKLMNPPPVWFT 1365
               + NN           +  IG  D+G++ ++    + L  YP  S S+L  PPP+W +
Sbjct: 343  ---SANN----------YDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWIS 389

Query: 1366 TN 1371
             N
Sbjct: 390  PN 391


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  131 bits (329), Expect = 6e-28
 Identities = 111/387 (28%), Positives = 179/387 (46%), Gaps = 11/387 (2%)
 Frame = +1

Query: 151  SKLPQHILDLIPKKIDTLDDLIRFSCVCKTWRL---SALPLLPSNLFNKPWLIVSYTNEH 321
            SK+P   L LI +K+ +++D +RF  VCK+W           PS+    PWL+++     
Sbjct: 923  SKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSS--KSPWLMLAEKEN- 979

Query: 322  VSKNGTACDKTLGFFDLSTRQLYKVDLPEIANHRICGSCRGGWLVTVNSFGDIQLIHPFT 501
                     +  GF+   + ++Y++ LPE+   + C     GWLVT+ +  D+ L++P T
Sbjct: 980  --------SEIRGFYSPLSGKVYEIRLPEVVG-KWCWGSPYGWLVTIGTDLDMCLLNPLT 1030

Query: 502  RKVISLAPVTALPGVVSCYYNERQNLVYDVKNYGSVCTIASNCMREFYIYKAVMLPWAG- 678
            R  I L  + A P +         N + D    GS         ++ +IYKAV+      
Sbjct: 1031 RVQILLPSLRACPNL---------NTLIDSSTQGSRS-------KDIFIYKAVLSSAPSS 1074

Query: 679  ---VVMVIHGLNKMLAFCKVSDENKKWISVQGVCEGNFNDVTIFKGEFYAVKNNGSVWVV 849
                VM+I+     LAF K   +   W  ++    G  +D+  F G F AV  +  VW+ 
Sbjct: 1075 PDCAVMIIYSDYGRLAFTKPGHQT--WTLLESE-SGPVDDIIYFNGSFLAVNLSWEVWIC 1131

Query: 850  HGGFDTSSTPFVKFV----IGQPDNWGYYKKYLVEAKGELFLLDRVRYPLEPGDDEADRT 1017
                  S    ++F     +   D   Y  KYLVE+ GE++++ R  Y     D    RT
Sbjct: 1132 D--ISGSQLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTARRDIPYMRT 1189

Query: 1018 LVFSIKKIIEWNGPKFVSVDYIGKDCAVFVGCNDSFACLTSDVPDCKGNSIYFTDDFVDG 1197
              FS+ K+   N  ++  V+ +   C+ F+G N SF+   SD P+ + NSIYFTDD+   
Sbjct: 1190 WTFSVLKLDMCN-KRWEEVENLDH-CSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGF 1247

Query: 1198 VSNMNNVNIGSILENFVNEPIGRQDIG 1278
            ++   N ++G  + NF N  I    +G
Sbjct: 1248 LNIPRNFDMG--IYNFQNTQIEHYPVG 1272