BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014955
         (1905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   305   3e-80
ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   303   1e-79
ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   303   1e-79
ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-...   302   2e-79
ref|XP_002314782.1| predicted protein [Populus trichocarpa] gi|2...   302   2e-79

>ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
            max]
          Length = 334

 Score =  305 bits (781), Expect = 3e-80
 Identities = 146/308 (47%), Positives = 194/308 (62%), Gaps = 10/308 (3%)
 Frame = -3

Query: 1804 VLERFLTQRNTLSYLFNRPTIDSDDYQTNWPYSKPVVIVDVLWNLAFXXXXXXXXXSTFQ 1625
            +L   L +R   + +      + ++ + +W YSKPVV +D+ WN+AF          T +
Sbjct: 27   ILALLLGRRGHSAVVRETAARELEERRADWTYSKPVVALDITWNMAFVLVSAVMLACTVK 86

Query: 1624 ERPSTPLRLWIAGYAFQCVLHVAFVYFDHRRRIXXXXXXXXXXXXXXSRRGSA------A 1463
            E P+TP+R WI GYA QC++HVA V+ ++RRR                    +       
Sbjct: 87   ENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQYDDVNDSDEDARFT 146

Query: 1462 KRLESVNTMFSFFWWMMGFYWIVVGGQALLQDAPRLYWLAVIFLAFDVFFAILCVAFACL 1283
            KR  S+NTM S  WWM+GFYW+V GG  LLQDAPRLYWL+V+FLAFDVFFAI CV  ACL
Sbjct: 147  KRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFFAIFCVVLACL 206

Query: 1282 IGIALCCCFPCLVLALYAMGVHEGASEDVIRILPSYRFRQCNE---PQVSGSAMMKMESG 1112
            IGIALCCC PC++  LYA+   EGASE  + ILP YRF+  +    P   G +M+ ME+ 
Sbjct: 207  IGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRFQLLSNEETPGEGGGSMIPMETS 266

Query: 1111 DDH-ISEISLPAEDSECCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYN 935
            + + ++E +L  ED+ECCIC++ Y DG +LH L C H FH  CIVKWL+++ATCPLCKYN
Sbjct: 267  NGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYN 326

Query: 934  IASGDELV 911
            I  G+E V
Sbjct: 327  ILKGNEQV 334


>ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
            [Brachypodium distachyon]
          Length = 354

 Score =  303 bits (776), Expect = 1e-79
 Identities = 146/288 (50%), Positives = 186/288 (64%), Gaps = 13/288 (4%)
 Frame = -3

Query: 1735 DDYQTNWPYSKPVVIVDVLWNLAFXXXXXXXXXSTFQERPSTPLRLWIAGYAFQCVLHVA 1556
            ++ Q +W YS+PVV +D+LWNLAF          +  E PS PLR+WIAGYA QCVLH+ 
Sbjct: 67   EERQADWAYSRPVVALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMV 126

Query: 1555 FVYFDHRRRIXXXXXXXXXXXXXXSRRGSA--AKRLESVNTMFSFFWWMMGFYWIVVGGQ 1382
             V  ++R R                  GS+  AK LES NTMFSF WW++GFYW+  GG+
Sbjct: 127  CVAIEYRVRHGQRGGPSMAADEERGSDGSSSIAKHLESGNTMFSFIWWIIGFYWVSAGGE 186

Query: 1381 ALLQDAPRLYWLAVIFLAFDVFFAILCVAFACLIGIALCCCFPCLVLALYAMGVHEGASE 1202
             L++DAP+LYWL ++FLAFDVFF + CVA AC+IGIA+CCC PC++  LYA+   EGASE
Sbjct: 187  VLIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVSDQEGASE 246

Query: 1201 DVIRILPSYRFRQCNEPQVSGSAM------MKMESGDDHISEISLPAEDSECCICLTKYV 1040
            D IR +P Y+FR+ NEP+    +M      M +E G +   E  L AED+ECCICL+ Y 
Sbjct: 247  DDIRQIPRYKFRRINEPEKQSVSMTGSSGGMMIECGTNQPIEKVLAAEDAECCICLSAYD 306

Query: 1039 DGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYNI-----ASGDELV 911
            DG +L  L C H FHC CI KWL I+ATCPLCK N+     +SG E V
Sbjct: 307  DGAELRELPCAHHFHCACIDKWLHINATCPLCKLNVRKNSSSSGSEEV 354


>ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
            max]
          Length = 344

 Score =  303 bits (775), Expect = 1e-79
 Identities = 148/318 (46%), Positives = 197/318 (61%), Gaps = 20/318 (6%)
 Frame = -3

Query: 1804 VLERFLTQRNTLSYLFNRPTIDSDDYQTNWPYSKPVVIVDVLWNLAFXXXXXXXXXSTFQ 1625
            +L   L +R   + +      + ++ + +W YSKPVV +D+ WN+AF          T +
Sbjct: 27   ILALLLGRRGHSAVVRETAARELEERRADWTYSKPVVALDITWNMAFVLVSAVMLACTVK 86

Query: 1624 ERPSTPLRLWIAGYAFQCVLHVAFVYFDHRRR-----------IXXXXXXXXXXXXXXSR 1478
            E P+TP+R WI GYA QC++HVA V+ ++RRR                            
Sbjct: 87   ENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQYDDVNDSDEDDVGT 146

Query: 1477 RGSAA-----KRLESVNTMFSFFWWMMGFYWIVVGGQALLQDAPRLYWLAVIFLAFDVFF 1313
             GS++     KR  S+NTM S  WWM+GFYW+V GG  LLQDAPRLYWL+V+FLAFDVFF
Sbjct: 147  SGSSSSSGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFLAFDVFF 206

Query: 1312 AILCVAFACLIGIALCCCFPCLVLALYAMGVHEGASEDVIRILPSYRFRQCNE---PQVS 1142
            AI CV  ACLIGIALCCC PC++  LYA+   EGASE  + ILP YRF+  +    P   
Sbjct: 207  AIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSILPKYRFQLLSNEETPGEG 266

Query: 1141 GSAMMKMESGDDH-ISEISLPAEDSECCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRI 965
            G +M+ ME+ + + ++E +L  ED+ECCIC++ Y DG +LH L C H FH  CIVKWL++
Sbjct: 267  GGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKM 326

Query: 964  SATCPLCKYNIASGDELV 911
            +ATCPLCKYNI  G+E V
Sbjct: 327  NATCPLCKYNILKGNEQV 344


>ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
          Length = 336

 Score =  302 bits (774), Expect = 2e-79
 Identities = 153/292 (52%), Positives = 191/292 (65%), Gaps = 15/292 (5%)
 Frame = -3

Query: 1741 DSDDY------QTNWPYSKPVVIVDVLWNLAFXXXXXXXXXSTFQERPSTPLRLWIAGYA 1580
            DSDD+      + N  YS P++++DV+WNLAF         STF+ERPSTPLRLWI+GY 
Sbjct: 55   DSDDFSRRSFIRENCSYSMPILVLDVVWNLAFVLVSVVVLFSTFRERPSTPLRLWISGYG 114

Query: 1579 FQCVLHVAFVYFDHRRRIXXXXXXXXXXXXXXSRRGSAAKRLESVNTMFSFFWWMMGFYW 1400
             QC+LHV FV+F+++R +                  S  KRLES+NTM S  WW+ GFYW
Sbjct: 115  LQCLLHVGFVFFEYQRSMAHHGFEDRTAHR------SIMKRLESMNTMTSSVWWVFGFYW 168

Query: 1399 IVVGGQALLQDAPRLYWLAVIFLAFDVFFAILCVAFACLIGIALCCCFPCLVLALYAMGV 1220
            IV+GGQALLQD+PRLYWL V+FLAFD+FF + C+  AC+I  +LCCC P +  A YAM  
Sbjct: 169  IVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMACVIFFSLCCCIPIVAFA-YAMTT 227

Query: 1219 HEGASEDVIRILPSYRFRQC--------NEPQVSGSAMMKMESGDDH-ISEISLPAEDSE 1067
             EGASE+ IR LP Y FRQ          E +  GS    +E  + H I E++L  EDSE
Sbjct: 228  REGASEEDIRTLPKYTFRQAVLGTFNLGKEREPIGST---VELDNSHRIKELALHPEDSE 284

Query: 1066 CCICLTKYVDGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYNIASGDELV 911
            CCICL++Y DG +L++L C H FHC CI KWLRI+ATCPLCK NI  GD LV
Sbjct: 285  CCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINATCPLCKSNIRQGDTLV 336


>ref|XP_002314782.1| predicted protein [Populus trichocarpa] gi|222863822|gb|EEF00953.1|
            predicted protein [Populus trichocarpa]
          Length = 295

 Score =  302 bits (774), Expect = 2e-79
 Identities = 147/284 (51%), Positives = 188/284 (66%), Gaps = 12/284 (4%)
 Frame = -3

Query: 1735 DDYQTNWPYSKPVVIVDVLWNLAFXXXXXXXXXSTFQERPSTPLRLWIAGYAFQCVLHVA 1556
            D+ + +  YSKPVV +D+LWN AF          T +ERP+TP+RLWI GY+ QC++HV 
Sbjct: 26   DERRADLGYSKPVVALDILWNAAFVVVSVTMLVVTAKERPNTPIRLWICGYSLQCLVHVI 85

Query: 1555 FVYFDHRRRIXXXXXXXXXXXXXXSRRGSAA-------KRLESVNTMFSFFWWMMGFYWI 1397
             V+ ++RRR               +RRG          KR ESVNTM SF WW++GFYW+
Sbjct: 86   LVWLEYRRR--------------NTRRGRDVESEQHFTKRCESVNTMVSFLWWIVGFYWV 131

Query: 1396 VVGGQALLQDAPRLYWLAVIFLAFDVFFAILCVAFACLIGIALCCCFPCLVLALYAMGVH 1217
            V GG ALLQ+APRLYWLAV+FLAFDVFFAI CV  ACLIGIALCCC PC++  LYA+   
Sbjct: 132  VSGGDALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQ 191

Query: 1216 EGASEDVIRILPSYRF----RQCNEPQVSGSAMMKMESGDDHIS-EISLPAEDSECCICL 1052
            EGASE  + ILP Y++     +   P+V    M+ +E+   ++S E  L  ED+ECCICL
Sbjct: 192  EGASEADLSILPKYKYLVMGNEEKRPRVGAGKMVPVETSSGYLSTERVLLPEDAECCICL 251

Query: 1051 TKYVDGVKLHSLHCGHLFHCECIVKWLRISATCPLCKYNIASGD 920
            + Y DG +LH+L C H FH  CIVKWL+++ATCPLCKYNI  G+
Sbjct: 252  SPYEDGAELHALPCNHHFHAMCIVKWLKMNATCPLCKYNILKGN 295